| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is folC [H]
Identifier: 209551528
GI number: 209551528
Start: 4105418
End: 4106746
Strand: Direct
Name: folC [H]
Synonym: Rleg2_3957
Alternate gene names: 209551528
Gene position: 4105418-4106746 (Clockwise)
Preceding gene: 209551527
Following gene: 209551541
Centisome position: 90.47
GC content: 62.3
Gene sequence:
>1329_bases GTGAGTGAGGCAGCACAGGAGATCGACAAGCTCATGGGATTGCATCCCAAGGGTTTTGATCTGTCTCTCGATCGCATCAC CCGTCTACTCGATGTGCTCGGCAATCCGCACAGGAAACTGCCGCCGGTGATCCATGTCGCCGGCACCAACGGCAAGGGGT CGGTCACCGCCTTCTGCCGCGCTCTGCTCGAAGCCGGCGGCTACAGCGCCCATGTTCACACCTCGCCGCATCTCGTCAAC TGGCACGAGCGTTATCGCATCGGTGTGGCGGGCGGCCGCGGGCAGCTTGTCGATGACGCCGTCTTTGCCGAGGCCTTGCG CCGTGTGGCCGATGCCAATGCCGGACAGCACATCACCGTCTTCGAAATCCTGACGGCGGTCACCTTCATCCTGTTTTCCG AACAGCCGGCCGATGCCGCGATCATCGAAGTCGGCCTCGGCGGCCGGTTCGATGCCACCAATGTCATTACCGATCCGGGC GTCTCGGTGATCATGCCGATCTCGCTGGATCACCAGCCCTATCTCGGCGACAGGGTCGAGCTGATCGCCGCCGAAAAGGC CGGCATCATGAAGCCGGGACTTCCCGTCGTCATCGGTCATCAGGAATATGATGCAGCCCTCGACGTGCTGATGTCGACGG CCGAACGGCTGCATTGCCCGAGCGCCGTCTTCGGGCAGGATTTCATGGCGCATGAGGAATATGGCCGGCTCGTCTATCAG GACGAATTCGGTCTGGCCGACCTGCCGCTGCCGCGCCTTCCCGGCCGCCATCAATATGCCAATGCCGCCGCTGCCATCCG CGCCGTCAAGGCGGCGGGCTTCACCGTTACCGAGACGATGATGGAAAAGGCGATGAATTCGGTGGAATGGCCGGGCCGGC TGCAGCGTCTCGGCGAAGGCCGGCTGCTGCAACATGCACCCGCCGGTGCTGAGATCTGGATCGATGGCGGGCACAATCCC GGGGCCGGCGAAGTGATCGCCGAAGCCATGGCCAATTTCGAAGAGCGCCAGTCTCGGCCGCTTTTTCTGATCATCGGCAT GATCAACACCAAGGATCCGGTCGGCTATTTCAAGGCCTTTGCCGGCTTGGTCGAGAAGGTTTTCTGCGTGCCGATCCGCA ACAGCGATGCGATGATCGACCCGGTGATCTTGTCGAACGCCGCCTATGATGCCGGCCTGGTTGCCGAACCGATGTCGACC GTCGGCGATGCGCTGGAAGCCATAAAAGCAGTCCTCGATCCGGAGGGTTTACCCCCGCGCATCCTCGTCGGCGGCTCTCT CTATCTCGTCGGCGATGTGCTTTCCGACAACGGCACGCCTCCGAAGTGA
Upstream 100 bases:
>100_bases GGCGAACAACATGAATAGCGGCGCGATCGCCCTGGCGGCGAGCGCCTGATAACCGATAAGCAGGCGGGGTGCCGAATTGA TACCCAGAGGCCAAACCGCG
Downstream 100 bases:
>100_bases TCGGTGAAATGAACAATACGAAATGAAAAAAGCCCGGTCGAAGCCGGGCTTTTTCGTCGATGTGAATCGGGCGATATCAG GCGGCGCTGGAAATCCAGTT
Product: FolC bifunctional protein
Products: NA
Alternate protein names: Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolylpolyglutamate synthase; Tetrahydrofolate synthase [H]
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MSEAAQEIDKLMGLHPKGFDLSLDRITRLLDVLGNPHRKLPPVIHVAGTNGKGSVTAFCRALLEAGGYSAHVHTSPHLVN WHERYRIGVAGGRGQLVDDAVFAEALRRVADANAGQHITVFEILTAVTFILFSEQPADAAIIEVGLGGRFDATNVITDPG VSVIMPISLDHQPYLGDRVELIAAEKAGIMKPGLPVVIGHQEYDAALDVLMSTAERLHCPSAVFGQDFMAHEEYGRLVYQ DEFGLADLPLPRLPGRHQYANAAAAIRAVKAAGFTVTETMMEKAMNSVEWPGRLQRLGEGRLLQHAPAGAEIWIDGGHNP GAGEVIAEAMANFEERQSRPLFLIIGMINTKDPVGYFKAFAGLVEKVFCVPIRNSDAMIDPVILSNAAYDAGLVAEPMST VGDALEAIKAVLDPEGLPPRILVGGSLYLVGDVLSDNGTPPK
Sequences:
>Translated_442_residues MSEAAQEIDKLMGLHPKGFDLSLDRITRLLDVLGNPHRKLPPVIHVAGTNGKGSVTAFCRALLEAGGYSAHVHTSPHLVN WHERYRIGVAGGRGQLVDDAVFAEALRRVADANAGQHITVFEILTAVTFILFSEQPADAAIIEVGLGGRFDATNVITDPG VSVIMPISLDHQPYLGDRVELIAAEKAGIMKPGLPVVIGHQEYDAALDVLMSTAERLHCPSAVFGQDFMAHEEYGRLVYQ DEFGLADLPLPRLPGRHQYANAAAAIRAVKAAGFTVTETMMEKAMNSVEWPGRLQRLGEGRLLQHAPAGAEIWIDGGHNP GAGEVIAEAMANFEERQSRPLFLIIGMINTKDPVGYFKAFAGLVEKVFCVPIRNSDAMIDPVILSNAAYDAGLVAEPMST VGDALEAIKAVLDPEGLPPRILVGGSLYLVGDVLSDNGTPPK >Mature_441_residues SEAAQEIDKLMGLHPKGFDLSLDRITRLLDVLGNPHRKLPPVIHVAGTNGKGSVTAFCRALLEAGGYSAHVHTSPHLVNW HERYRIGVAGGRGQLVDDAVFAEALRRVADANAGQHITVFEILTAVTFILFSEQPADAAIIEVGLGGRFDATNVITDPGV SVIMPISLDHQPYLGDRVELIAAEKAGIMKPGLPVVIGHQEYDAALDVLMSTAERLHCPSAVFGQDFMAHEEYGRLVYQD EFGLADLPLPRLPGRHQYANAAAAIRAVKAAGFTVTETMMEKAMNSVEWPGRLQRLGEGRLLQHAPAGAEIWIDGGHNPG AGEVIAEAMANFEERQSRPLFLIIGMINTKDPVGYFKAFAGLVEKVFCVPIRNSDAMIDPVILSNAAYDAGLVAEPMSTV GDALEAIKAVLDPEGLPPRILVGGSLYLVGDVLSDNGTPPK
Specific function: Conversion of folates to polyglutamate derivatives [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932990, Length=369, Percent_Identity=28.1842818428184, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI66932984, Length=368, Percent_Identity=27.9891304347826, Blast_Score=123, Evalue=4e-28, Organism=Escherichia coli, GI1788654, Length=373, Percent_Identity=31.9034852546917, Blast_Score=156, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17553150, Length=446, Percent_Identity=28.0269058295964, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17553148, Length=443, Percent_Identity=27.313769751693, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI71984923, Length=443, Percent_Identity=27.313769751693, Blast_Score=134, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6323760, Length=433, Percent_Identity=29.0993071593533, Blast_Score=152, Evalue=9e-38, Organism=Saccharomyces cerevisiae, GI6324815, Length=326, Percent_Identity=26.3803680981595, Blast_Score=95, Evalue=2e-20, Organism=Drosophila melanogaster, GI24641571, Length=318, Percent_Identity=27.9874213836478, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI24581568, Length=178, Percent_Identity=30.8988764044944, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17 [H]
Molecular weight: Translated: 47391; Mature: 47260
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00018 EF_HAND_1 ; PS01012 FOLYLPOLYGLU_SYNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAAQEIDKLMGLHPKGFDLSLDRITRLLDVLGNPHRKLPPVIHVAGTNGKGSVTAFCR CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHH ALLEAGGYSAHVHTSPHLVNWHERYRIGVAGGRGQLVDDAVFAEALRRVADANAGQHITV HHHHCCCCEEEEECCCCEECCHHHEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEHH FEILTAVTFILFSEQPADAAIIEVGLGGRFDATNVITDPGVSVIMPISLDHQPYLGDRVE HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEE LIAAEKAGIMKPGLPVVIGHQEYDAALDVLMSTAERLHCPSAVFGQDFMAHEEYGRLVYQ EEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEE DEFGLADLPLPRLPGRHQYANAAAAIRAVKAAGFTVTETMMEKAMNSVEWPGRLQRLGEG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHCCCC RLLQHAPAGAEIWIDGGHNPGAGEVIAEAMANFEERQSRPLFLIIGMINTKDPVGYFKAF CEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHH AGLVEKVFCVPIRNSDAMIDPVILSNAAYDAGLVAEPMSTVGDALEAIKAVLDPEGLPPR HHHHHHEEEEEECCCCCEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCE ILVGGSLYLVGDVLSDNGTPPK EEECCCEEEEEEEECCCCCCCC >Mature Secondary Structure SEAAQEIDKLMGLHPKGFDLSLDRITRLLDVLGNPHRKLPPVIHVAGTNGKGSVTAFCR CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHH ALLEAGGYSAHVHTSPHLVNWHERYRIGVAGGRGQLVDDAVFAEALRRVADANAGQHITV HHHHCCCCEEEEECCCCEECCHHHEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEHH FEILTAVTFILFSEQPADAAIIEVGLGGRFDATNVITDPGVSVIMPISLDHQPYLGDRVE HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEE LIAAEKAGIMKPGLPVVIGHQEYDAALDVLMSTAERLHCPSAVFGQDFMAHEEYGRLVYQ EEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEE DEFGLADLPLPRLPGRHQYANAAAAIRAVKAAGFTVTETMMEKAMNSVEWPGRLQRLGEG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHCCCC RLLQHAPAGAEIWIDGGHNPGAGEVIAEAMANFEERQSRPLFLIIGMINTKDPVGYFKAF CEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHH AGLVEKVFCVPIRNSDAMIDPVILSNAAYDAGLVAEPMSTVGDALEAIKAVLDPEGLPPR HHHHHHEEEEEECCCCCEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCE ILVGGSLYLVGDVLSDNGTPPK EEECCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]