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The map label for this gene is accD [H]

Identifier: 209551527

GI number: 209551527

Start: 4104461

End: 4105366

Strand: Direct

Name: accD [H]

Synonym: Rleg2_3956

Alternate gene names: 209551527

Gene position: 4104461-4105366 (Clockwise)

Preceding gene: 209551526

Following gene: 209551528

Centisome position: 90.45

GC content: 60.49

Gene sequence:

>906_bases
TTGAACTGGATCACCAACTACGTTCGCCCGCGGATCAATTCCATGCTGGGCCGTCGCGAAGTGCCGGAGAACCTCTGGAT
CAAGTGCCCGGAAACCGGCGAGATGGTCTTCCACAAGGATCTGGAAGGCAACAAATGGGTTATTCCGGCATCCGGCTATC
ACATGAAGATGCCGGCCAAGGCCCGCCTGGCCGATCTGTTCGACAATGGCGACTATGAATCGCTGCCGCAGCCGAAGGTC
GCCCAGGACCCGCTGAAGTTCCGCGATTCGAAGAAATATAGCGATCGCCTGCGCGACAGCCGCCTGAAGACCGAACAGGA
GGATACCATCCTCGCCGGCCTCGGGAAGGTGCAGGGACTGAAACTTGTGGCGGTCGTGCATGAATTCAACTTTATCGGCG
GTTCGCTCGGCATGGCTGCCGGCGAGGCCATCGTCAAGGCTTTCGAGCGTGCGACGTCTGAAAAGTGCCCGCTGGTAATG
TTCCCCGCTTCCGGCGGCGCGCGCATGCAGGAAGGCATCCTGTCGCTGATGCAGCTGCCGCGCACGACGGTTGCCGTCGA
CCTGCTGAAGGAATCCGGTCAGCCCTATATCGTCGTCCTGACCAATCCGACCACTGGCGGCGTCACGGCCTCCTATGCCA
TGCTCGGCGATATTCATCTGGCTGAGCCGGGCGCCGAAATCGGCTTTGCCGGCAAGCGCGTCATCGAGCAGACCTTGCGC
GAAAAACTGCCCGAAGGCTTCCAGACCTCCGAATACCTGCTGGAGCATGGTATGGTCGATATGGTCGTCAAACGTCACGA
TATCCCGGAAACGCTGGCGCGCGTCCTGAAGATCCTGACGAAGAAGCCGGTGTCAGTGGCGAACAACATGAATAGCGGCG
CGATCGCCCTGGCGGCGAGCGCCTGA

Upstream 100 bases:

>100_bases
GCATGTCGCGCAAAACTGTGCAGCGGTTTAGCGGGAACACAAAGCCGGCAAGCGATCTTGAAAGATCGTGACGCGCTTTA
GTCAATCAGGAGTATTCGAG

Downstream 100 bases:

>100_bases
TAACCGATAAGCAGGCGGGGTGCCGAATTGATACCCAGAGGCCAAACCGCGGTGAGTGAGGCAGCACAGGAGATCGACAA
GCTCATGGGATTGCATCCCA

Product: acetyl-CoA carboxylase subunit beta

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta [H]

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MNWITNYVRPRINSMLGRREVPENLWIKCPETGEMVFHKDLEGNKWVIPASGYHMKMPAKARLADLFDNGDYESLPQPKV
AQDPLKFRDSKKYSDRLRDSRLKTEQEDTILAGLGKVQGLKLVAVVHEFNFIGGSLGMAAGEAIVKAFERATSEKCPLVM
FPASGGARMQEGILSLMQLPRTTVAVDLLKESGQPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGKRVIEQTLR
EKLPEGFQTSEYLLEHGMVDMVVKRHDIPETLARVLKILTKKPVSVANNMNSGAIALAASA

Sequences:

>Translated_301_residues
MNWITNYVRPRINSMLGRREVPENLWIKCPETGEMVFHKDLEGNKWVIPASGYHMKMPAKARLADLFDNGDYESLPQPKV
AQDPLKFRDSKKYSDRLRDSRLKTEQEDTILAGLGKVQGLKLVAVVHEFNFIGGSLGMAAGEAIVKAFERATSEKCPLVM
FPASGGARMQEGILSLMQLPRTTVAVDLLKESGQPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGKRVIEQTLR
EKLPEGFQTSEYLLEHGMVDMVVKRHDIPETLARVLKILTKKPVSVANNMNSGAIALAASA
>Mature_301_residues
MNWITNYVRPRINSMLGRREVPENLWIKCPETGEMVFHKDLEGNKWVIPASGYHMKMPAKARLADLFDNGDYESLPQPKV
AQDPLKFRDSKKYSDRLRDSRLKTEQEDTILAGLGKVQGLKLVAVVHEFNFIGGSLGMAAGEAIVKAFERATSEKCPLVM
FPASGGARMQEGILSLMQLPRTTVAVDLLKESGQPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGKRVIEQTLR
EKLPEGFQTSEYLLEHGMVDMVVKRHDIPETLARVLKILTKKPVSVANNMNSGAIALAASA

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA [H

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family [H]

Homologues:

Organism=Escherichia coli, GI1788655, Length=286, Percent_Identity=46.8531468531469, Blast_Score=266, Evalue=2e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762 [H]

Pfam domain/function: PF01039 Carboxyl_trans [H]

EC number: =6.4.1.2 [H]

Molecular weight: Translated: 33106; Mature: 33106

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWITNYVRPRINSMLGRREVPENLWIKCPETGEMVFHKDLEGNKWVIPASGYHMKMPAK
CCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEECCCCCEEEEECCCCEEECCHH
ARLADLFDNGDYESLPQPKVAQDPLKFRDSKKYSDRLRDSRLKTEQEDTILAGLGKVQGL
HHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCE
KLVAVVHEFNFIGGSLGMAAGEAIVKAFERATSEKCPLVMFPASGGARMQEGILSLMQLP
EEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCC
RTTVAVDLLKESGQPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGKRVIEQTLR
CHHHHHHHHHHCCCCEEEEEECCCCCCCEEHHHHHCCEEECCCCCCCCHHHHHHHHHHHH
EKLPEGFQTSEYLLEHGMVDMVVKRHDIPETLARVLKILTKKPVSVANNMNSGAIALAAS
HHCCCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEEC
A
C
>Mature Secondary Structure
MNWITNYVRPRINSMLGRREVPENLWIKCPETGEMVFHKDLEGNKWVIPASGYHMKMPAK
CCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEECCCCCEEEEECCCCEEECCHH
ARLADLFDNGDYESLPQPKVAQDPLKFRDSKKYSDRLRDSRLKTEQEDTILAGLGKVQGL
HHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCE
KLVAVVHEFNFIGGSLGMAAGEAIVKAFERATSEKCPLVMFPASGGARMQEGILSLMQLP
EEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCC
RTTVAVDLLKESGQPYIVVLTNPTTGGVTASYAMLGDIHLAEPGAEIGFAGKRVIEQTLR
CHHHHHHHHHHCCCCEEEEEECCCCCCCEEHHHHHCCEEECCCCCCCCHHHHHHHHHHHH
EKLPEGFQTSEYLLEHGMVDMVVKRHDIPETLARVLKILTKKPVSVANNMNSGAIALAAS
HHCCCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEEC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA