Definition Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession NC_011369
Length 4,537,948

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The map label for this gene is ubiG

Identifier: 209551103

GI number: 209551103

Start: 3658076

End: 3658834

Strand: Direct

Name: ubiG

Synonym: Rleg2_3527

Alternate gene names: 209551103

Gene position: 3658076-3658834 (Clockwise)

Preceding gene: 209551096

Following gene: 209551109

Centisome position: 80.61

GC content: 61.92

Gene sequence:

>759_bases
ATGACGGAAGGCGCCAGAAGCACGATCGACCAGGGCGAAGTGGACCGCTTCTCGGCGATGGCGGCGGAATGGTGGAGCCC
GACGGGCAAGTTCCGGCCGCTGCACAAATTCAATCCCGTCCGCCTGACCTATATAAGAGACAAGGCCTGCGAGAATTTCG
GCCGTGATCCGAAAAGCGCGCGTCCGCTGGAAGGTCTGCGCGTGCTCGATATCGGCTGCGGCGGCGGCCTTTTGTCCGAA
CCCGTCGCCCGCATGGGCGCCACCGTCACTGGCGCCGATCCCTCCGAAAAGAATATCGGCATCGCCTCGACGCATGCCAA
GGCCTCCGGCGTTTCGGTCGACTACCGCGCCGTCACCGCCGAGGAACTGGCGGACGCCGGCGAAACCTTCGACATCGTCC
TGAACATGGAAGTGGTCGAACACGTCGCCGACGTCGAGTTCTTCATGACGACCTGCGCAAAAATGGTCCGCCCCGGCGGC
CTGATCTTCGTTGCCACCATCAACCGCACGATGAAAGCAGCGGCCCTTGCCATCTTCGCCGCCGAAAACATCCTGCGCTG
GCTGCCGCGCGGCACCCACCAATATGAGAAACTGGTGCGCCCGGAAGAGCTGGAAAAGCCATTGACGGCAAGCGGCCTCG
AGATCACCGACCGCACCGGCGTCTTCTTCAATCCGCTGTCGAACCAGTGGAACCTGTCCAAGGATATGGACGTGAATTAT
ATGCTGCTGGCCAAGCGGTCTGCACAGCTCGACCGATAA

Upstream 100 bases:

>100_bases
TTGGCGAGCGGCTCCACGCTCACCGGTCCTCTGCTCCGCGCCCCTTGACTTATGCCCGCGATCGTCCGACTTCACGTGTC
ACGAACGCAAGGAGTGGACG

Downstream 100 bases:

>100_bases
TAAGCCGGCTACACTTTCAGGGTTTGAACGTGTGCAAGCAGATCCCTTTGGGTTTCTGCGTTGCGAACGGCAAGTTCCTT
CACCCGGTCGCGATCGATTG

Product: 3-demethylubiquinone-9 3-methyltransferase

Products: NA

Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MTEGARSTIDQGEVDRFSAMAAEWWSPTGKFRPLHKFNPVRLTYIRDKACENFGRDPKSARPLEGLRVLDIGCGGGLLSE
PVARMGATVTGADPSEKNIGIASTHAKASGVSVDYRAVTAEELADAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGG
LIFVATINRTMKAAALAIFAAENILRWLPRGTHQYEKLVRPEELEKPLTASGLEITDRTGVFFNPLSNQWNLSKDMDVNY
MLLAKRSAQLDR

Sequences:

>Translated_252_residues
MTEGARSTIDQGEVDRFSAMAAEWWSPTGKFRPLHKFNPVRLTYIRDKACENFGRDPKSARPLEGLRVLDIGCGGGLLSE
PVARMGATVTGADPSEKNIGIASTHAKASGVSVDYRAVTAEELADAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGG
LIFVATINRTMKAAALAIFAAENILRWLPRGTHQYEKLVRPEELEKPLTASGLEITDRTGVFFNPLSNQWNLSKDMDVNY
MLLAKRSAQLDR
>Mature_251_residues
TEGARSTIDQGEVDRFSAMAAEWWSPTGKFRPLHKFNPVRLTYIRDKACENFGRDPKSARPLEGLRVLDIGCGGGLLSEP
VARMGATVTGADPSEKNIGIASTHAKASGVSVDYRAVTAEELADAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGGL
IFVATINRTMKAAALAIFAAENILRWLPRGTHQYEKLVRPEELEKPLTASGLEITDRTGVFFNPLSNQWNLSKDMDVNYM
LLAKRSAQLDR

Specific function: Ubiquinone biosynthesis. [C]

COG id: COG2227

COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family

Homologues:

Organism=Homo sapiens, GI118600965, Length=247, Percent_Identity=40.8906882591093, Blast_Score=216, Evalue=1e-56,
Organism=Escherichia coli, GI1788564, Length=237, Percent_Identity=42.1940928270042, Blast_Score=199, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI115533050, Length=249, Percent_Identity=34.9397590361446, Blast_Score=153, Evalue=8e-38,
Organism=Saccharomyces cerevisiae, GI6324476, Length=230, Percent_Identity=30, Blast_Score=110, Evalue=2e-25,
Organism=Drosophila melanogaster, GI281365311, Length=247, Percent_Identity=32.7935222672065, Blast_Score=145, Evalue=3e-35,
Organism=Drosophila melanogaster, GI24585589, Length=268, Percent_Identity=31.3432835820896, Blast_Score=137, Evalue=9e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UBIG_RHILW (B5ZRR7)

Other databases:

- EMBL:   CP001191
- RefSeq:   YP_002283020.1
- ProteinModelPortal:   B5ZRR7
- GeneID:   6982287
- GenomeReviews:   CP001191_GR
- KEGG:   rlt:Rleg2_3527
- HOGENOM:   HBG738842
- OMA:   KFITPDE
- ProtClustDB:   PRK05134
- HAMAP:   MF_00472
- InterPro:   IPR013216
- InterPro:   IPR010233
- TIGRFAMs:   TIGR01983

Pfam domain/function: PF08241 Methyltransf_11

EC number: =2.1.1.64

Molecular weight: Translated: 27750; Mature: 27619

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEGARSTIDQGEVDRFSAMAAEWWSPTGKFRPLHKFNPVRLTYIRDKACENFGRDPKSA
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCC
RPLEGLRVLDIGCGGGLLSEPVARMGATVTGADPSEKNIGIASTHAKASGVSVDYRAVTA
CCCCCCEEEEECCCCCHHHHHHHHHCCEEECCCCCCCCCCEEECCCCCCCCEEEHHEHHH
EELADAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGGLIFVATINRTMKAAALAIFA
HHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
AENILRWLPRGTHQYEKLVRPEELEKPLTASGLEITDRTGVFFNPLSNQWNLSKDMDVNY
HHHHHHHCCCCHHHHHHCCCHHHHCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCE
MLLAKRSAQLDR
EEEEECHHCCCC
>Mature Secondary Structure 
TEGARSTIDQGEVDRFSAMAAEWWSPTGKFRPLHKFNPVRLTYIRDKACENFGRDPKSA
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCC
RPLEGLRVLDIGCGGGLLSEPVARMGATVTGADPSEKNIGIASTHAKASGVSVDYRAVTA
CCCCCCEEEEECCCCCHHHHHHHHHCCEEECCCCCCCCCCEEECCCCCCCCEEEHHEHHH
EELADAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGGLIFVATINRTMKAAALAIFA
HHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
AENILRWLPRGTHQYEKLVRPEELEKPLTASGLEITDRTGVFFNPLSNQWNLSKDMDVNY
HHHHHHHCCCCHHHHHHCCCHHHHCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCE
MLLAKRSAQLDR
EEEEECHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA