| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is ptsP [H]
Identifier: 209551101
GI number: 209551101
Start: 3654147
End: 3656414
Strand: Reverse
Name: ptsP [H]
Synonym: Rleg2_3525
Alternate gene names: 209551101
Gene position: 3656414-3654147 (Counterclockwise)
Preceding gene: 209551102
Following gene: 209551100
Centisome position: 80.57
GC content: 64.33
Gene sequence:
>2268_bases ATGAGAGACCTTTCCGGCGGTCCGCGCGTGCTGCTCAGGCGGCTGCGCGAGTTGATGGCGGAGCCGCTGGAGCCGCAGGA TCGTCTTGACCGGATCGTCCGCCAGATCGCCGGCAACATGGTGGCTGAGGTCTGCTCGGTTTACGTGCTGCGCGCCGATG GCGTGCTCGAACTCTATGCCACCGAAGGCCTCAACCGCGAAGCCGTGCACCTGGCGCAATTGAAGATGGGGCAGGGCCTG GTCGGCACGATCGCGGCCTCGGCCCAGCCGCTCAACCTTTCCGACGCACAGTCGCATCCTGCTTTCCGCTACCTGCCGGA GACCGGCGAAGAGATCTACCATTCCTTCCTCGGTGTGCCGATCCTCAGGACCGGGCGCTCGCTCGGCGTTCTCGTCGTGC AGAACAAGGCAAGCCGCAACTATCGCGAGGAGGAGCTCGAAGCGCTCGAGACGACGGCGATGGTGCTGGCCGAGATGATC GCCACCGGCGAGCTGAAGAAGATCACCAAGCCGGGCCTCGAACTCGACCTGACGCGCTCGGTGACCGTCGACGGCGACAC CTATAATGACGGCATCGGCCTCGGTTACGTCGTGCTGCACGAGCCGCGCATCGTCGTCACCAACCTGCTCAACGAAGATG CCGAGAAGGAAATCCGGCGGCTGGCCGAAGCCATGGGCTCGCTCAGGATCTCGATCGACGACATGCTGTCGCGCCGCGAC GTGTCAATGGAAGGCGAGCACCGCGAGGTGCTCGAAACCTATCGCATGTTCGCGCATGACCAGGGCTGGGTGCGCAAGCT CGAGGAGGCGATCCGCAACGGCCTGACGGCGGAAGCGGCGGTCGAAAAGGTGCAGAGCGACACCAAGGCGCGGATGATGC GGTTGACCGACCCCTATCTGCGCGAACGCATGCATGATTTCGAGGATCTGGCGAACCGGCTGCTCAGGCAATTGACGGGT TATACCGGGCGGACGACCGCCGAGGGCTTCCCCAACGATGCGGTCATCCTGGCGCGCGCCATGGGGGCGGCCGAGCTGCT CGATTATCCCCGCGCCAATGTGCGCGGGCTGGTGCTGGAAGAAGGCGCGGTGACCAGCCATGTGGTGATCGTCGCGCGCG CCATGGGTATTCCGGTCATCGGCCAGGCAGCGGGTGTGGTGGCGCTTGCCGAGAACGGCGATGCCGTGATCATCGACGCC GACGAAGGACACGTGCATCTGCGGCCGATGGCCGATCACCGGCGCTCCTACGAGGAAAAGGTTCGCTTCCGCGCCAGACG GCAGGAACAGTTCCGAGCACTGCGCGCCGTCGAGCCGGTGACAAAGGATGGGCAGCGGATCGCGCTGATGATGAATGCGG GGCTGCTGGTCGACCTGCCGCAGCTTTCGGAATCGGGTGCCGAGGGCATTGGCCTCTTCCGCACCGAACTGCAGTTCATG ATCGCCTCCACCATGCCGAAGGCGGACGAGCAGGAGCAGTTCTACCGCAATGTGATAAAACAGGCGGCGGGCCGCCCCGT CACCTTCCGTACGCTCGATATCGGCGGCGACAAGGTCGTGCCGTATTTCCGCGGCCATGAGGAAGAAAATCCAGCACTCG GCTGGCGCGCCATCCGGCTGTCGCTCGACCGGCCGGGACTGTTGCGCACCCAGTTGCGCGCCCTGTTGAAGGCATCGGCC GATACCGAGCTGAAGCTGATGGTGCCGATGGTAACCGAGGTTTCCGAGCTGAAGGTGGTGCGCGAGCTGCTGCAGAAGGA AGTGCAGCATCTCTCACGCTTCGGCCATGGTCTGCCGCGCAAGCTGCAGTTCGGAGCGATGCTGGAGGTGCCAGCACTGC TTTGGCAGCTCGATGAGCTGATGGAGGCGGTGGATTTCGTCTCGGTCGGTTCGAACGACCTCTTCCAGTTTTCGATGGCG GTCGATCGCGGCAATGCGCGGGTCTCGGACCGGTTCGACCCGCTCGGCAAACCGTTTTTGCGCATTCTGCGCGATATCGT GCGCGGCGCGGACCGGAACAAGACGCCGGTAACGCTCTGCGGCGAACTCGCCAGCAAGCCGATCTCGGCGATGGCGCTGC TCGGTATAGGTTTCCGTTCGATCTCGATGTCGCCGGCCTCGATCGGACCGGTGAAGGCGATGCTGCTCGGGCTCGATGTC GGGGCGCTGGCAACGGCGATGAACGAGGTGCTGGACGATGTCCACGCCATGACGCCGATGCGAGAGGTGCTTGCCCGCTT CGCCGAGAGCCACAATATTCCCCTTTAG
Upstream 100 bases:
>100_bases ATAAGAATTGATTCCCAGTGGGCGGCCTGCCCCTTCAGGTTGAGGAGACGAGGGCCGGCCCGCCGGGACTGAGTGCTTTG TTTCGGGAGCTTGAGACGCC
Downstream 100 bases:
>100_bases CTAGACGTTAAGAAGAATCGGAGTGAAGGGTGGCGAAGCTTCCCGTTGAAAAGATGCGCGAGCTGGAACGCCGTTTCGGC GAGATCGAAGCGCGCATGTC
Product: PTSINtr with GAF domain, PtsP
Products: NA
Alternate protein names: Enzyme I-Ntr; Phosphotransferase system, enzyme I [H]
Number of amino acids: Translated: 755; Mature: 755
Protein sequence:
>755_residues MRDLSGGPRVLLRRLRELMAEPLEPQDRLDRIVRQIAGNMVAEVCSVYVLRADGVLELYATEGLNREAVHLAQLKMGQGL VGTIAASAQPLNLSDAQSHPAFRYLPETGEEIYHSFLGVPILRTGRSLGVLVVQNKASRNYREEELEALETTAMVLAEMI ATGELKKITKPGLELDLTRSVTVDGDTYNDGIGLGYVVLHEPRIVVTNLLNEDAEKEIRRLAEAMGSLRISIDDMLSRRD VSMEGEHREVLETYRMFAHDQGWVRKLEEAIRNGLTAEAAVEKVQSDTKARMMRLTDPYLRERMHDFEDLANRLLRQLTG YTGRTTAEGFPNDAVILARAMGAAELLDYPRANVRGLVLEEGAVTSHVVIVARAMGIPVIGQAAGVVALAENGDAVIIDA DEGHVHLRPMADHRRSYEEKVRFRARRQEQFRALRAVEPVTKDGQRIALMMNAGLLVDLPQLSESGAEGIGLFRTELQFM IASTMPKADEQEQFYRNVIKQAAGRPVTFRTLDIGGDKVVPYFRGHEEENPALGWRAIRLSLDRPGLLRTQLRALLKASA DTELKLMVPMVTEVSELKVVRELLQKEVQHLSRFGHGLPRKLQFGAMLEVPALLWQLDELMEAVDFVSVGSNDLFQFSMA VDRGNARVSDRFDPLGKPFLRILRDIVRGADRNKTPVTLCGELASKPISAMALLGIGFRSISMSPASIGPVKAMLLGLDV GALATAMNEVLDDVHAMTPMREVLARFAESHNIPL
Sequences:
>Translated_755_residues MRDLSGGPRVLLRRLRELMAEPLEPQDRLDRIVRQIAGNMVAEVCSVYVLRADGVLELYATEGLNREAVHLAQLKMGQGL VGTIAASAQPLNLSDAQSHPAFRYLPETGEEIYHSFLGVPILRTGRSLGVLVVQNKASRNYREEELEALETTAMVLAEMI ATGELKKITKPGLELDLTRSVTVDGDTYNDGIGLGYVVLHEPRIVVTNLLNEDAEKEIRRLAEAMGSLRISIDDMLSRRD VSMEGEHREVLETYRMFAHDQGWVRKLEEAIRNGLTAEAAVEKVQSDTKARMMRLTDPYLRERMHDFEDLANRLLRQLTG YTGRTTAEGFPNDAVILARAMGAAELLDYPRANVRGLVLEEGAVTSHVVIVARAMGIPVIGQAAGVVALAENGDAVIIDA DEGHVHLRPMADHRRSYEEKVRFRARRQEQFRALRAVEPVTKDGQRIALMMNAGLLVDLPQLSESGAEGIGLFRTELQFM IASTMPKADEQEQFYRNVIKQAAGRPVTFRTLDIGGDKVVPYFRGHEEENPALGWRAIRLSLDRPGLLRTQLRALLKASA DTELKLMVPMVTEVSELKVVRELLQKEVQHLSRFGHGLPRKLQFGAMLEVPALLWQLDELMEAVDFVSVGSNDLFQFSMA VDRGNARVSDRFDPLGKPFLRILRDIVRGADRNKTPVTLCGELASKPISAMALLGIGFRSISMSPASIGPVKAMLLGLDV GALATAMNEVLDDVHAMTPMREVLARFAESHNIPL >Mature_755_residues MRDLSGGPRVLLRRLRELMAEPLEPQDRLDRIVRQIAGNMVAEVCSVYVLRADGVLELYATEGLNREAVHLAQLKMGQGL VGTIAASAQPLNLSDAQSHPAFRYLPETGEEIYHSFLGVPILRTGRSLGVLVVQNKASRNYREEELEALETTAMVLAEMI ATGELKKITKPGLELDLTRSVTVDGDTYNDGIGLGYVVLHEPRIVVTNLLNEDAEKEIRRLAEAMGSLRISIDDMLSRRD VSMEGEHREVLETYRMFAHDQGWVRKLEEAIRNGLTAEAAVEKVQSDTKARMMRLTDPYLRERMHDFEDLANRLLRQLTG YTGRTTAEGFPNDAVILARAMGAAELLDYPRANVRGLVLEEGAVTSHVVIVARAMGIPVIGQAAGVVALAENGDAVIIDA DEGHVHLRPMADHRRSYEEKVRFRARRQEQFRALRAVEPVTKDGQRIALMMNAGLLVDLPQLSESGAEGIGLFRTELQFM IASTMPKADEQEQFYRNVIKQAAGRPVTFRTLDIGGDKVVPYFRGHEEENPALGWRAIRLSLDRPGLLRTQLRALLKASA DTELKLMVPMVTEVSELKVVRELLQKEVQHLSRFGHGLPRKLQFGAMLEVPALLWQLDELMEAVDFVSVGSNDLFQFSMA VDRGNARVSDRFDPLGKPFLRILRDIVRGADRNKTPVTLCGELASKPISAMALLGIGFRSISMSPASIGPVKAMLLGLDV GALATAMNEVLDDVHAMTPMREVLARFAESHNIPL
Specific function: Component of the phosphoenolpyruvate-dependent nitrogen- metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. Enzyme I- Ntr transfers the phosphoryl group from phosphoenolpyruvate (PEP)
COG id: COG3605
COG function: function code T; Signal transduction protein containing GAF and PtsI domains
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GAF domain [H]
Homologues:
Organism=Escherichia coli, GI1789193, Length=754, Percent_Identity=33.1564986737401, Blast_Score=350, Evalue=2e-97, Organism=Escherichia coli, GI1788756, Length=540, Percent_Identity=30.5555555555556, Blast_Score=270, Evalue=2e-73, Organism=Escherichia coli, GI48994992, Length=488, Percent_Identity=32.7868852459016, Blast_Score=261, Evalue=1e-70, Organism=Escherichia coli, GI1788726, Length=544, Percent_Identity=32.5367647058824, Blast_Score=259, Evalue=6e-70, Organism=Escherichia coli, GI1787994, Length=400, Percent_Identity=25.75, Blast_Score=80, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003018 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF01590 GAF; PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 83757; Mature: 83757
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00742 PEP_ENZYMES_2 ; PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDLSGGPRVLLRRLRELMAEPLEPQDRLDRIVRQIAGNMVAEVCSVYVLRADGVLELYA CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEHEECCCEEEEEE TEGLNREAVHLAQLKMGQGLVGTIAASAQPLNLSDAQSHPAFRYLPETGEEIYHSFLGVP CCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCH ILRTGRSLGVLVVQNKASRNYREEELEALETTAMVLAEMIATGELKKITKPGLELDLTRS HHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEEE VTVDGDTYNDGIGLGYVVLHEPRIVVTNLLNEDAEKEIRRLAEAMGSLRISIDDMLSRRD EEECCCCCCCCCCEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHCEEEEHHHHHHHCC VSMEGEHREVLETYRMFAHDQGWVRKLEEAIRNGLTAEAAVEKVQSDTKARMMRLTDPYL CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHH RERMHDFEDLANRLLRQLTGYTGRTTAEGFPNDAVILARAMGAAELLDYPRANVRGLVLE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHCCCCCCCEEEEE EGAVTSHVVIVARAMGIPVIGQAAGVVALAENGDAVIIDADEGHVHLRPMADHRRSYEEK CCCCHHHHHHHHHHHCCCEECCCCCEEEEECCCCEEEEECCCCCEEEEECHHHHHHHHHH VRFRARRQEQFRALRAVEPVTKDGQRIALMMNAGLLVDLPQLSESGAEGIGLFRTELQFM HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEECHHHCCCCCCCCHHHHHHHHHH IASTMPKADEQEQFYRNVIKQAAGRPVTFRTLDIGGDKVVPYFRGHEEENPALGWRAIRL HHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCEEEEEE SLDRPGLLRTQLRALLKASADTELKLMVPMVTEVSELKVVRELLQKEVQHLSRFGHGLPR ECCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KLQFGAMLEVPALLWQLDELMEAVDFVSVGSNDLFQFSMAVDRGNARVSDRFDPLGKPFL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHH RILRDIVRGADRNKTPVTLCGELASKPISAMALLGIGFRSISMSPASIGPVKAMLLGLDV HHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHCCH GALATAMNEVLDDVHAMTPMREVLARFAESHNIPL HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRDLSGGPRVLLRRLRELMAEPLEPQDRLDRIVRQIAGNMVAEVCSVYVLRADGVLELYA CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEHEECCCEEEEEE TEGLNREAVHLAQLKMGQGLVGTIAASAQPLNLSDAQSHPAFRYLPETGEEIYHSFLGVP CCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCH ILRTGRSLGVLVVQNKASRNYREEELEALETTAMVLAEMIATGELKKITKPGLELDLTRS HHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEEE VTVDGDTYNDGIGLGYVVLHEPRIVVTNLLNEDAEKEIRRLAEAMGSLRISIDDMLSRRD EEECCCCCCCCCCEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHCEEEEHHHHHHHCC VSMEGEHREVLETYRMFAHDQGWVRKLEEAIRNGLTAEAAVEKVQSDTKARMMRLTDPYL CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHH RERMHDFEDLANRLLRQLTGYTGRTTAEGFPNDAVILARAMGAAELLDYPRANVRGLVLE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHCCCCCCCEEEEE EGAVTSHVVIVARAMGIPVIGQAAGVVALAENGDAVIIDADEGHVHLRPMADHRRSYEEK CCCCHHHHHHHHHHHCCCEECCCCCEEEEECCCCEEEEECCCCCEEEEECHHHHHHHHHH VRFRARRQEQFRALRAVEPVTKDGQRIALMMNAGLLVDLPQLSESGAEGIGLFRTELQFM HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEECHHHCCCCCCCCHHHHHHHHHH IASTMPKADEQEQFYRNVIKQAAGRPVTFRTLDIGGDKVVPYFRGHEEENPALGWRAIRL HHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCEEEEEE SLDRPGLLRTQLRALLKASADTELKLMVPMVTEVSELKVVRELLQKEVQHLSRFGHGLPR ECCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KLQFGAMLEVPALLWQLDELMEAVDFVSVGSNDLFQFSMAVDRGNARVSDRFDPLGKPFL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHH RILRDIVRGADRNKTPVTLCGELASKPISAMALLGIGFRSISMSPASIGPVKAMLLGLDV HHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHCCH GALATAMNEVLDDVHAMTPMREVLARFAESHNIPL HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 7896715; 8973315 [H]