| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is blh [H]
Identifier: 209549863
GI number: 209549863
Start: 2333382
End: 2334662
Strand: Reverse
Name: blh [H]
Synonym: Rleg2_2276
Alternate gene names: 209549863
Gene position: 2334662-2333382 (Counterclockwise)
Preceding gene: 209549865
Following gene: 209549862
Centisome position: 51.45
GC content: 64.64
Gene sequence:
>1281_bases ATGACATCCGTAAGGGTCAATGAGCTGATATCGGTGGCGGGGCAGCCCGATGCCGCCGGTTTTGCTGCTTTTGCGGCAGA CGGTTTTGCCGGCGTCATCAATGCGCGGCCGGATGGCGAGGAGCCGGGGCAGCCGGGCGATGCGGCGGAAAAGGCTTCTG CCGCCGCCGCGGGGCTCGCCTACAGCTTCGTGCCGGTGAAAGGGGCCGAGATCACCGAGGCCGATATCCGCGCCTTCCAG AGGGCGATGATGCAAGCGAAGGGGCCGGTCGTCGCTCATTGCAAGAGCGGCACGCGGGCGCTGACGCTCTATGCGCTCGG AGAGGTGCTCGACGGGCGGATGCAGCCCGGGGACGTCGAGGCCTTCGGTCAAAACCTCGGCTTCGATCTTGCCGGCGCAC GCCGCTGGCTGGAAAAGCGGGCAGGGCAGACGGCTGTCGTGAAGGCCTTCTTCGAACCCCGCACCTGCAGTGTGCAATAT GTCGTTTCAGACCCGGTCACGAAACGCTGCGCCATCATCGACCCGGTGCTCGATTTCGACGAGATGTCGGGTGCGACGGG AACGACCAATGCCGACGCCATCCTCGCGCATATCGACAGCGAAGGGCTGACGGTCGAGTGGGTCCTCGACACGCATCCGC ATGCCGATCATTTCTCCGCCGCGCACTATCTCAAGGGAAAGACCGGCGCGCCGACAGCGATCGGCGCCCATGTCACCGAG GTCCAGCTGCTCTGGAAGGAAATCTACAACTGGCCGGCACTCGAAACCGACGGCTCGCAATGGAACCGGCTGTTTGCCGA GGGCGACACTTTCGAGATCGGCGGGCTTGAAGCCCGTGTGATGTTCTCGCCCGGCCATACGCTTGCCTCGGTGACCTATG TGATCGGTGACGCCGCCTTCGTGCACGACACCGTATTCACCCCGGATTCCGGCACGGCGCGCACTGATTTTCCCGGCGGC AGCGCCAGCGCCCTCTGGCACTCGATCCAGGCCATCCTGTCGCTGCCCGAGGAGACCCGGCTCTTTTCCGGCCACGACTA TCAGCCTGGCGGTCGCCATCCCCGCTGGGAAAGCACGGTGACCGCCCAGAAGACCGCCAATCCGCATATATCGGGTATCG ATGAGGCCGGCTTTGTGACGCTGCGCCAGGCGCGCGACCGTACGCTACCGAAACCGAAGCTGATGCTGCACGCGCTACAG GTGAATATTCGGGGCGGACGGCTGCCCGAGCCGGAGGAGAACGGCCGGCGCTATCTGAAAATCCCGCTGGATGCGTTGTA G
Upstream 100 bases:
>100_bases GGGGCGGCGCCAAGCGACTATTCTTGCGCTCGGCAATATACTTGTGAGATTGTACCGATATACATGCGATACTGTCGATG CAGGCAGCGCGGGGGCTTCG
Downstream 100 bases:
>100_bases CAACGCAGGGAGCAGCGTTGCGGCGCGTGCTTCGAGGCTTCGCCCTCCCGGGCTGCGCACCTCAGCATGAGGGAGGTCGG AGGGTGCCGCACCCACGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MTSVRVNELISVAGQPDAAGFAAFAADGFAGVINARPDGEEPGQPGDAAEKASAAAAGLAYSFVPVKGAEITEADIRAFQ RAMMQAKGPVVAHCKSGTRALTLYALGEVLDGRMQPGDVEAFGQNLGFDLAGARRWLEKRAGQTAVVKAFFEPRTCSVQY VVSDPVTKRCAIIDPVLDFDEMSGATGTTNADAILAHIDSEGLTVEWVLDTHPHADHFSAAHYLKGKTGAPTAIGAHVTE VQLLWKEIYNWPALETDGSQWNRLFAEGDTFEIGGLEARVMFSPGHTLASVTYVIGDAAFVHDTVFTPDSGTARTDFPGG SASALWHSIQAILSLPEETRLFSGHDYQPGGRHPRWESTVTAQKTANPHISGIDEAGFVTLRQARDRTLPKPKLMLHALQ VNIRGGRLPEPEENGRRYLKIPLDAL
Sequences:
>Translated_426_residues MTSVRVNELISVAGQPDAAGFAAFAADGFAGVINARPDGEEPGQPGDAAEKASAAAAGLAYSFVPVKGAEITEADIRAFQ RAMMQAKGPVVAHCKSGTRALTLYALGEVLDGRMQPGDVEAFGQNLGFDLAGARRWLEKRAGQTAVVKAFFEPRTCSVQY VVSDPVTKRCAIIDPVLDFDEMSGATGTTNADAILAHIDSEGLTVEWVLDTHPHADHFSAAHYLKGKTGAPTAIGAHVTE VQLLWKEIYNWPALETDGSQWNRLFAEGDTFEIGGLEARVMFSPGHTLASVTYVIGDAAFVHDTVFTPDSGTARTDFPGG SASALWHSIQAILSLPEETRLFSGHDYQPGGRHPRWESTVTAQKTANPHISGIDEAGFVTLRQARDRTLPKPKLMLHALQ VNIRGGRLPEPEENGRRYLKIPLDAL >Mature_425_residues TSVRVNELISVAGQPDAAGFAAFAADGFAGVINARPDGEEPGQPGDAAEKASAAAAGLAYSFVPVKGAEITEADIRAFQR AMMQAKGPVVAHCKSGTRALTLYALGEVLDGRMQPGDVEAFGQNLGFDLAGARRWLEKRAGQTAVVKAFFEPRTCSVQYV VSDPVTKRCAIIDPVLDFDEMSGATGTTNADAILAHIDSEGLTVEWVLDTHPHADHFSAAHYLKGKTGAPTAIGAHVTEV QLLWKEIYNWPALETDGSQWNRLFAEGDTFEIGGLEARVMFSPGHTLASVTYVIGDAAFVHDTVFTPDSGTARTDFPGGS ASALWHSIQAILSLPEETRLFSGHDYQPGGRHPRWESTVTAQKTANPHISGIDEAGFVTLRQARDRTLPKPKLMLHALQV NIRGGRLPEPEENGRRYLKIPLDAL
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=281, Percent_Identity=29.5373665480427, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17538952, Length=265, Percent_Identity=27.1698113207547, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI221330176, Length=269, Percent_Identity=27.8810408921933, Blast_Score=97, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 45709; Mature: 45578
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVRVNELISVAGQPDAAGFAAFAADGFAGVINARPDGEEPGQPGDAAEKASAAAAGLA CCCCCHHHHHHHCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHE YSFVPVKGAEITEADIRAFQRAMMQAKGPVVAHCKSGTRALTLYALGEVLDGRMQPGDVE EEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEHEEHHHHHCCCCCCCCHH AFGQNLGFDLAGARRWLEKRAGQTAVVKAFFEPRTCSVQYVVSDPVTKRCAIIDPVLDFD HHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCCHHEEECCCCCHH EMSGATGTTNADAILAHIDSEGLTVEWVLDTHPHADHFSAAHYLKGKTGAPTAIGAHVTE HHCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCHHCCHHHH VQLLWKEIYNWPALETDGSQWNRLFAEGDTFEIGGLEARVMFSPGHTLASVTYVIGDAAF HHHHHHHHHCCCCCCCCCHHHHHHEECCCEEEECCEEEEEEECCCCCHHEEHHHHCCHHH VHDTVFTPDSGTARTDFPGGSASALWHSIQAILSLPEETRLFSGHDYQPGGRHPRWESTV HCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCE TAQKTANPHISGIDEAGFVTLRQARDRTLPKPKLMLHALQVNIRGGRLPEPEENGRRYLK EEHHCCCCCCCCCCCCCEEEEEHHHCCCCCCHHHEEEEEEEEECCCCCCCCCCCCCEEEE IPLDAL EECCCC >Mature Secondary Structure TSVRVNELISVAGQPDAAGFAAFAADGFAGVINARPDGEEPGQPGDAAEKASAAAAGLA CCCCHHHHHHHCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHE YSFVPVKGAEITEADIRAFQRAMMQAKGPVVAHCKSGTRALTLYALGEVLDGRMQPGDVE EEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEHEEHHHHHCCCCCCCCHH AFGQNLGFDLAGARRWLEKRAGQTAVVKAFFEPRTCSVQYVVSDPVTKRCAIIDPVLDFD HHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCCHHEEECCCCCHH EMSGATGTTNADAILAHIDSEGLTVEWVLDTHPHADHFSAAHYLKGKTGAPTAIGAHVTE HHCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCHHCCHHHH VQLLWKEIYNWPALETDGSQWNRLFAEGDTFEIGGLEARVMFSPGHTLASVTYVIGDAAF HHHHHHHHHCCCCCCCCCHHHHHHEECCCEEEECCEEEEEEECCCCCHHEEHHHHCCHHH VHDTVFTPDSGTARTDFPGGSASALWHSIQAILSLPEETRLFSGHDYQPGGRHPRWESTV HCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCE TAQKTANPHISGIDEAGFVTLRQARDRTLPKPKLMLHALQVNIRGGRLPEPEENGRRYLK EEHHCCCCCCCCCCCCCEEEEEHHHCCCCCCHHHEEEEEEEEECCCCCCCCCCCCCEEEE IPLDAL EECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]