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The map label for this gene is ropA [H]

Identifier: 209549668

GI number: 209549668

Start: 2135294

End: 2136322

Strand: Reverse

Name: ropA [H]

Synonym: Rleg2_2075

Alternate gene names: 209549668

Gene position: 2136322-2135294 (Counterclockwise)

Preceding gene: 209549669

Following gene: 209549667

Centisome position: 47.08

GC content: 57.53

Gene sequence:

>1029_bases
ATGAACATCAGAATGGTTTTGCTTGCATCAGCAGCAGCATTTGCTGCATCGACGCCGGTTCTTGCAGCTGACGCTATTGT
TGCTGCTGAGCCGGAACCGGTTGAATATGTTCGCGTCTGTGACGCTTACGGCACCGGCTACTTCTACATCCCGGGCACCG
AAACCTGCCTCAAGATCGAAGGCTACATCCGTTTCCAGGTCAACGTTGGCGACCAGCCAGGTGGTGACAACGATTCTGAT
TGGGATGCAGTAACTCGCGGTCAGGTTCAGTTCACGGCCAAGAGCGACACCGAGTATGGTCCGCTGACCGGCGTCATCGT
CATGCAGTTCAATGCTGACAATGCCACCGATCAGGACGCCATCCTCGACTCCGCTTATCTCGACATCGCGGGCTTCCGCG
CTGGTCTGTTCTACAGCTGGTGGGACGATGGCCTCTCCGGCGAAACCGACGACATCGGCTCGGTTGTAACGCTGCACAAC
TCCATGCGCTATCAGTATGAAAGCGGCACCTTCTACGCTGGCCTCAGCGTCGACGAACTGGAAGACGGCGTTTACAAGGC
TGATGAAGAAGCCAACAACGTTGGCGTTGCCTTCGGCGTCGGCGGCACGGCTGGTGCCTTCAGCTACCAGGTCACTGGTG
GCTGGGATTTCGACAACGAAGACGGCGCAATCCGCGCTATGGGTACGGTTGAAATCGGCCCCGGCACGCTCGGCCTCGCT
GGCGTATACTCTTCCGGCCCGAACTCCTACTACTCGTCGGCTGAATGGGCTATCGCAGCCGAATACGCCATCAAGGCAAC
CGACAAGCTGAAGATCACCCCGGCCGTTCAGTACTACGGCAACTACTTCGGTGGCGACAAGGCCGTTCCGGATGACTTTG
ACGGTCTCGGCGATGCATGGAAGGTCGGTCTGACGGTTGATTACCAGATCGTCGACAACTTTTACGCCAAGGCTTCGGTT
CAGTACCTCGATCCGGATGATGGCGACGACTCCACGACGGGCTACTTCCGTCTGCAGCGTTCGTTCTAA

Upstream 100 bases:

>100_bases
GATCGATCCGCACGCCGAGATGGCTGTTCAAACTGGGCCGGCTTCAAATCGACTACCCGATTGGAAGCCAGCCCCGATCG
ACAAAGGAATGGATTGGTAA

Downstream 100 bases:

>100_bases
TCCACTTAGTGGATGCTCCCGGTCTTCGGACCGGGGGCACTTCAAATCAGTTTCTGATCCGAGTGACCTCCGATCAGCTA
CGGGGACGGGTCCGGTCTTC

Product: porin

Products: NA

Alternate protein names: OMPIIIA [H]

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MNIRMVLLASAAAFAASTPVLAADAIVAAEPEPVEYVRVCDAYGTGYFYIPGTETCLKIEGYIRFQVNVGDQPGGDNDSD
WDAVTRGQVQFTAKSDTEYGPLTGVIVMQFNADNATDQDAILDSAYLDIAGFRAGLFYSWWDDGLSGETDDIGSVVTLHN
SMRYQYESGTFYAGLSVDELEDGVYKADEEANNVGVAFGVGGTAGAFSYQVTGGWDFDNEDGAIRAMGTVEIGPGTLGLA
GVYSSGPNSYYSSAEWAIAAEYAIKATDKLKITPAVQYYGNYFGGDKAVPDDFDGLGDAWKVGLTVDYQIVDNFYAKASV
QYLDPDDGDDSTTGYFRLQRSF

Sequences:

>Translated_342_residues
MNIRMVLLASAAAFAASTPVLAADAIVAAEPEPVEYVRVCDAYGTGYFYIPGTETCLKIEGYIRFQVNVGDQPGGDNDSD
WDAVTRGQVQFTAKSDTEYGPLTGVIVMQFNADNATDQDAILDSAYLDIAGFRAGLFYSWWDDGLSGETDDIGSVVTLHN
SMRYQYESGTFYAGLSVDELEDGVYKADEEANNVGVAFGVGGTAGAFSYQVTGGWDFDNEDGAIRAMGTVEIGPGTLGLA
GVYSSGPNSYYSSAEWAIAAEYAIKATDKLKITPAVQYYGNYFGGDKAVPDDFDGLGDAWKVGLTVDYQIVDNFYAKASV
QYLDPDDGDDSTTGYFRLQRSF
>Mature_342_residues
MNIRMVLLASAAAFAASTPVLAADAIVAAEPEPVEYVRVCDAYGTGYFYIPGTETCLKIEGYIRFQVNVGDQPGGDNDSD
WDAVTRGQVQFTAKSDTEYGPLTGVIVMQFNADNATDQDAILDSAYLDIAGFRAGLFYSWWDDGLSGETDDIGSVVTLHN
SMRYQYESGTFYAGLSVDELEDGVYKADEEANNVGVAFGVGGTAGAFSYQVTGGWDFDNEDGAIRAMGTVEIGPGTLGLA
GVYSSGPNSYYSSAEWAIAAEYAIKATDKLKITPAVQYYGNYFGGDKAVPDDFDGLGDAWKVGLTVDYQIVDNFYAKASV
QYLDPDDGDDSTTGYFRLQRSF

Specific function: May act as an outer membrane pore [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alphaproteobacteria porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003684 [H]

Pfam domain/function: PF02530 Porin_2 [H]

EC number: NA

Molecular weight: Translated: 36762; Mature: 36762

Theoretical pI: Translated: 3.73; Mature: 3.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRMVLLASAAAFAASTPVLAADAIVAAEPEPVEYVRVCDAYGTGYFYIPGTETCLKIE
CCEEEEEEECHHHHHCCCCCEEECEEEECCCCCCCEEEEEHHCCCCEEEECCCCEEEEEE
GYIRFQVNVGDQPGGDNDSDWDAVTRGQVQFTAKSDTEYGPLTGVIVMQFNADNATDQDA
EEEEEEEEECCCCCCCCCCCCHHEECCEEEEEECCCCCCCCEEEEEEEEECCCCCCCHHH
ILDSAYLDIAGFRAGLFYSWWDDGLSGETDDIGSVVTLHNSMRYQYESGTFYAGLSVDEL
HHHHHHHEEEHHCCCEEEEECCCCCCCCCCCCCCEEEEECCEEEEECCCCEEECCCHHHH
EDGVYKADEEANNVGVAFGVGGTAGAFSYQVTGGWDFDNEDGAIRAMGTVEIGPGTLGLA
CCCCEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCEEEE
GVYSSGPNSYYSSAEWAIAAEYAIKATDKLKITPAVQYYGNYFGGDKAVPDDFDGLGDAW
EEECCCCCCCCCCCCEEEEEEEEEEECCEEEEEEEHEECCCCCCCCCCCCCCCCCCCCEE
KVGLTVDYQIVDNFYAKASVQYLDPDDGDDSTTGYFRLQRSF
EEEEEEEEEEECCCEEEEEEEEECCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MNIRMVLLASAAAFAASTPVLAADAIVAAEPEPVEYVRVCDAYGTGYFYIPGTETCLKIE
CCEEEEEEECHHHHHCCCCCEEECEEEECCCCCCCEEEEEHHCCCCEEEECCCCEEEEEE
GYIRFQVNVGDQPGGDNDSDWDAVTRGQVQFTAKSDTEYGPLTGVIVMQFNADNATDQDA
EEEEEEEEECCCCCCCCCCCCHHEECCEEEEEECCCCCCCCEEEEEEEEECCCCCCCHHH
ILDSAYLDIAGFRAGLFYSWWDDGLSGETDDIGSVVTLHNSMRYQYESGTFYAGLSVDEL
HHHHHHHEEEHHCCCEEEEECCCCCCCCCCCCCCEEEEECCEEEEECCCCEEECCCHHHH
EDGVYKADEEANNVGVAFGVGGTAGAFSYQVTGGWDFDNEDGAIRAMGTVEIGPGTLGLA
CCCCEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCEEEE
GVYSSGPNSYYSSAEWAIAAEYAIKATDKLKITPAVQYYGNYFGGDKAVPDDFDGLGDAW
EEECCCCCCCCCCCCEEEEEEEEEEECCEEEEEEEHEECCCCCCCCCCCCCCCCCCCCEE
KVGLTVDYQIVDNFYAKASVQYLDPDDGDDSTTGYFRLQRSF
EEEEEEEEEEECCCEEEEEEEEECCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1370281 [H]