| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is dipZ [H]
Identifier: 209549646
GI number: 209549646
Start: 2116285
End: 2118054
Strand: Direct
Name: dipZ [H]
Synonym: Rleg2_2053
Alternate gene names: 209549646
Gene position: 2116285-2118054 (Clockwise)
Preceding gene: 209549640
Following gene: 209549647
Centisome position: 46.64
GC content: 65.42
Gene sequence:
>1770_bases ATGACACTGCTGATCATTGCCTATCTCGGAGGTGCGCTGACGATCCTCAGCCCGTGCATCCTGCCGATCCTCCCCTTCGT CTTCGCCCGTGCCGGGCAGCCCTTCGTCCGCAGCACGCTGCCGATGCTGGCGGGCATGGCCGCCACCTTCGCTCTCGTCG CGACACTGGCCGCGGTCGGCGGCAGCTGGGCCATCCGCGCCAATGAATATGGCCGTCTTGCCGCGATCGTCCTGCTGGCG CTCTTCGGCGCCAGCCTGCTTTCGCCGCGCTTCGCCAGCACCCTCGCCCGGCCGATCGTCGATCTCGGCAACAATCTCCT GAACGCCAACGGCGGTGGACGCGCTGCGCCGACGGTGAAGAGCGCCCTCATCCTCGGCGTCGCTACCGGCCTGCTCTGGG CGCCCTGTGCCGGGCCGATCCTCGGCCTTGTTCTCACAGGTGCCGCCCTGCAGGGCGCTAACCTGCAGACCACCTTCCTG CTCGCCGCCTATGCCGCCGGTGCTGCAACCTCGCTTGCGGTCGCCCTGCTTGTCGGCGGCAGGATATTCGCCGCGATGAA ACGCTCGCTCGGCCTCGGCGACCGGATTCGCCAGGGTCTCGGTGCTGCGGTACTCGCGGGTGTCGCCGTCATCGCCCTCG GCCTCGACACCAGCCTGCTGTCGCGGCTTTCCTATGCGAGCACCGCATCACTGGAACAGGCCGTGCTCGACAGGTTGCAT GCCAAGCCCGCAGCCGGCGCCCCCGCCGAGGTCGCCAGCAACGGCGTGATGATCGCAGACGCCAAGAAGCCCTTTCGCAG CGATCTGCCGGTCGAAGGGTATGCGCCTTCGCTCGACGGCGCCGTCGAATGGCTGAACTCCAAGCCTCTGGCCACCGAGC AGCTGCGGGGCAAAGTGGTGCTCGTCGACTTCTGGACCTATTCCTGCATCAACTGCATTCGCACGATCCCCTATGTCAAA GCCTGGGCGGAAAAATACGCTGATCAGGGCCTCGTGGTGATCGGCGTCCACGCCCCGGAATTCGCCTTCGAGAAGAAGCT CGACAACGTCAAGAAGGCGGTCGGCGATTTCGAGATCGGCTATCCCGTCGCGATCGACAATGACTACAAAATCTGGCGCG CCTTCGAAAACAGCTACTGGCCGGCCGGCTATCTCATCGATGCCGAGGGCCAGATCCGCTACCACCATTTCGGCGAAGGC AACTATGGCAGGACCGAAAAAGCCATTCAGGACCTGCTGCGCGAAGCCGGCAGCCAGATGACGTCAAGTGCGCCGGTCGC ACCGGATGCTAAGGGCGTGGAAGCCTCTCCGGACCTTGGCAATATCCGCTCCGGCGAAACCTATCTCGGCTACGAACAGG CGGCGAATTTTGCCTCGCCCGAAGGACTGCAGGCCGACGCGCCGCATGAGTATTCGATCGCAGAACCCGGCCTCAACGGC TGGGGCCTGTCCGGAACCTGGACTGTCGGCAAGGATCAGGCGAGGCTTGATCAGGCCGGCGGCGGCATCACCTATCGCTT CAGCGCCCGCGACCTGCATCTTGTTCTCGGCCCCGGCACGGACGGCAAACCGATCCGCTTCCAGGTGACGGTCGACGGCA AGGCACCGGGAGCGGACCACGGCTCAGACATCGATGCCGACGGCAACGGCACGGTGACGGCGACCAGGCTTTACCAGCTT GTCCGCCAGTCCGGCACGGTCGGCGCCCGCAACTTCCAGATCCGCTTCCTCGATCCCGGGGTGCAGGCCTACGCCTTCAC CTTCGGCTGA
Upstream 100 bases:
>100_bases GACACATCCGGGATACGTCCGCCCGGCCATATCCTCGCCGTTGCTGGTTCAGGCCCATCGCCGTCCAGAGCCCGATCAAT CGGTTTCAAAGGAAACGATG
Downstream 100 bases:
>100_bases CCCGCAGACTGATCAATTCCGATCCTCGACAACGACCAAAGGAGTGATACCCATGAACAGACGTCTTCTTTTCACGGCAG CCCTTGCCTTCGCCACCGCC
Product: redoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 589; Mature: 588
Protein sequence:
>589_residues MTLLIIAYLGGALTILSPCILPILPFVFARAGQPFVRSTLPMLAGMAATFALVATLAAVGGSWAIRANEYGRLAAIVLLA LFGASLLSPRFASTLARPIVDLGNNLLNANGGGRAAPTVKSALILGVATGLLWAPCAGPILGLVLTGAALQGANLQTTFL LAAYAAGAATSLAVALLVGGRIFAAMKRSLGLGDRIRQGLGAAVLAGVAVIALGLDTSLLSRLSYASTASLEQAVLDRLH AKPAAGAPAEVASNGVMIADAKKPFRSDLPVEGYAPSLDGAVEWLNSKPLATEQLRGKVVLVDFWTYSCINCIRTIPYVK AWAEKYADQGLVVIGVHAPEFAFEKKLDNVKKAVGDFEIGYPVAIDNDYKIWRAFENSYWPAGYLIDAEGQIRYHHFGEG NYGRTEKAIQDLLREAGSQMTSSAPVAPDAKGVEASPDLGNIRSGETYLGYEQAANFASPEGLQADAPHEYSIAEPGLNG WGLSGTWTVGKDQARLDQAGGGITYRFSARDLHLVLGPGTDGKPIRFQVTVDGKAPGADHGSDIDADGNGTVTATRLYQL VRQSGTVGARNFQIRFLDPGVQAYAFTFG
Sequences:
>Translated_589_residues MTLLIIAYLGGALTILSPCILPILPFVFARAGQPFVRSTLPMLAGMAATFALVATLAAVGGSWAIRANEYGRLAAIVLLA LFGASLLSPRFASTLARPIVDLGNNLLNANGGGRAAPTVKSALILGVATGLLWAPCAGPILGLVLTGAALQGANLQTTFL LAAYAAGAATSLAVALLVGGRIFAAMKRSLGLGDRIRQGLGAAVLAGVAVIALGLDTSLLSRLSYASTASLEQAVLDRLH AKPAAGAPAEVASNGVMIADAKKPFRSDLPVEGYAPSLDGAVEWLNSKPLATEQLRGKVVLVDFWTYSCINCIRTIPYVK AWAEKYADQGLVVIGVHAPEFAFEKKLDNVKKAVGDFEIGYPVAIDNDYKIWRAFENSYWPAGYLIDAEGQIRYHHFGEG NYGRTEKAIQDLLREAGSQMTSSAPVAPDAKGVEASPDLGNIRSGETYLGYEQAANFASPEGLQADAPHEYSIAEPGLNG WGLSGTWTVGKDQARLDQAGGGITYRFSARDLHLVLGPGTDGKPIRFQVTVDGKAPGADHGSDIDADGNGTVTATRLYQL VRQSGTVGARNFQIRFLDPGVQAYAFTFG >Mature_588_residues TLLIIAYLGGALTILSPCILPILPFVFARAGQPFVRSTLPMLAGMAATFALVATLAAVGGSWAIRANEYGRLAAIVLLAL FGASLLSPRFASTLARPIVDLGNNLLNANGGGRAAPTVKSALILGVATGLLWAPCAGPILGLVLTGAALQGANLQTTFLL AAYAAGAATSLAVALLVGGRIFAAMKRSLGLGDRIRQGLGAAVLAGVAVIALGLDTSLLSRLSYASTASLEQAVLDRLHA KPAAGAPAEVASNGVMIADAKKPFRSDLPVEGYAPSLDGAVEWLNSKPLATEQLRGKVVLVDFWTYSCINCIRTIPYVKA WAEKYADQGLVVIGVHAPEFAFEKKLDNVKKAVGDFEIGYPVAIDNDYKIWRAFENSYWPAGYLIDAEGQIRYHHFGEGN YGRTEKAIQDLLREAGSQMTSSAPVAPDAKGVEASPDLGNIRSGETYLGYEQAANFASPEGLQADAPHEYSIAEPGLNGW GLSGTWTVGKDQARLDQAGGGITYRFSARDLHLVLGPGTDGKPIRFQVTVDGKAPGADHGSDIDADGNGTVTATRLYQLV RQSGTVGARNFQIRFLDPGVQAYAFTFG
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI42476013, Length=133, Percent_Identity=38.3458646616541, Blast_Score=107, Evalue=4e-23, Organism=Drosophila melanogaster, GI116007528, Length=215, Percent_Identity=29.7674418604651, Blast_Score=94, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR003834 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA; PF02683 DsbD [H]
EC number: NA
Molecular weight: Translated: 61790; Mature: 61659
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLIIAYLGGALTILSPCILPILPFVFARAGQPFVRSTLPMLAGMAATFALVATLAAVG CEEEEEEHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GSWAIRANEYGRLAAIVLLALFGASLLSPRFASTLARPIVDLGNNLLNANGGGRAAPTVK CCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHH SALILGVATGLLWAPCAGPILGLVLTGAALQGANLQTTFLLAAYAAGAATSLAVALLVGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RIFAAMKRSLGLGDRIRQGLGAAVLAGVAVIALGLDTSLLSRLSYASTASLEQAVLDRLH HHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AKPAAGAPAEVASNGVMIADAKKPFRSDLPVEGYAPSLDGAVEWLNSKPLATEQLRGKVV CCCCCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCEE LVDFWTYSCINCIRTIPYVKAWAEKYADQGLVVIGVHAPEFAFEKKLDNVKKAVGDFEIG EEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCC YPVAIDNDYKIWRAFENSYWPAGYLIDAEGQIRYHHFGEGNYGRTEKAIQDLLREAGSQM CEEEECCCCHHHHHHCCCCCCCCEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH TSSAPVAPDAKGVEASPDLGNIRSGETYLGYEQAANFASPEGLQADAPHEYSIAEPGLNG CCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC WGLSGTWTVGKDQARLDQAGGGITYRFSARDLHLVLGPGTDGKPIRFQVTVDGKAPGADH CCCCCEEECCCCHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCEEEEEEECCCCCCCCC GSDIDADGNGTVTATRLYQLVRQSGTVGARNFQIRFLDPGVQAYAFTFG CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECC >Mature Secondary Structure TLLIIAYLGGALTILSPCILPILPFVFARAGQPFVRSTLPMLAGMAATFALVATLAAVG EEEEEEHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GSWAIRANEYGRLAAIVLLALFGASLLSPRFASTLARPIVDLGNNLLNANGGGRAAPTVK CCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHH SALILGVATGLLWAPCAGPILGLVLTGAALQGANLQTTFLLAAYAAGAATSLAVALLVGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RIFAAMKRSLGLGDRIRQGLGAAVLAGVAVIALGLDTSLLSRLSYASTASLEQAVLDRLH HHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AKPAAGAPAEVASNGVMIADAKKPFRSDLPVEGYAPSLDGAVEWLNSKPLATEQLRGKVV CCCCCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCEE LVDFWTYSCINCIRTIPYVKAWAEKYADQGLVVIGVHAPEFAFEKKLDNVKKAVGDFEIG EEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCC YPVAIDNDYKIWRAFENSYWPAGYLIDAEGQIRYHHFGEGNYGRTEKAIQDLLREAGSQM CEEEECCCCHHHHHHCCCCCCCCEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH TSSAPVAPDAKGVEASPDLGNIRSGETYLGYEQAANFASPEGLQADAPHEYSIAEPGLNG CCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC WGLSGTWTVGKDQARLDQAGGGITYRFSARDLHLVLGPGTDGKPIRFQVTVDGKAPGADH CCCCCEEECCCCHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCEEEEEEECCCCCCCCC GSDIDADGNGTVTATRLYQLVRQSGTVGARNFQIRFLDPGVQAYAFTFG CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]