Definition Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession NC_011369
Length 4,537,948

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The map label for this gene is cya3 [H]

Identifier: 209549374

GI number: 209549374

Start: 1822387

End: 1823895

Strand: Direct

Name: cya3 [H]

Synonym: Rleg2_1779

Alternate gene names: 209549374

Gene position: 1822387-1823895 (Clockwise)

Preceding gene: 209549372

Following gene: 209549379

Centisome position: 40.16

GC content: 64.28

Gene sequence:

>1509_bases
ATGCAGGCATCGCGTTTTGCCTTTGGTCCGTTCGTGCTTGATCCGGCTGCGGGAACGCTCCTTCGGAATGACGATCCCGT
GGCCGTCGGCGACCGCGGGGTGAAGCTGCTTGCGGCGCTCGTCGGGCGGCCTGGAGAAATTCTCGGCAAGGCCGAGTTGA
TGGATGCGGCCTGGCCGGGCAGGGCGGTGGAGGAGGGCAACCTCACCGTCCAGATCGCGCAGCTGCGAAAGCTGCTTGGC
CCGGCTGCTGACGGCGGCGAGTGGATTGCCACGGTTCCGCGCGTCGGCTACCGCTTCACCGGAGCCTTAAATCTGCTCGG
CGGCGTCAAACGAAAGGCTTTGCCGCTGCCCGACAGGCTATCCATTGCTGTGCTGCCCTTCCTCAATATCAGCGATGACC
CCGAGCAGGAATTCTTCGCCGATGGGCTGACCGAAGACCTGATTACCGACCTTTCCAGGATGCCGGGTCTGTTCGTTATC
GCCCGCAACTCGGCGTTTTCCTACAAGGGAAAGGCGGTTGACATGCGAGAGATCGCCGGGGAACTCGGCGTGCGCTACCT
GCTCGAAGGCAGCGCCCGACGCGCCGCAGGACGGGTCCGCATCAATGCCAAGCTGATCGACGCCGTCAGCGGCGATCACC
TATGGGCCGAACGCTTCGATCGCAGCCTCGACGATATCTTTGCCGTTCAGGATGAGGTGGCGGAGAAGATCGTCGAGGCG
CTCCTCGGGCGGCTGCGCGCGCCACCGCCGCGCAATCGGCCAAGCAGCCTCGAGGCTTACGACCTCTGTGTGCGGGCGCG
CAGGCTGATGGATGATTCCCCGCAGGCGGCTGAGGAAGCGCATCTGATGCTAACGCGCGCCATCTCCCTCGACCCTGATT
ATGCCGAGGCCTATCGCTGGCTTGCCATGAACCACTGGATGGGACGGATCCATAGCGGCGGGCCGACGGAATTCAACCGT
AACCTCGCTTTAGAACTGGCACGCAGGGCCGTCACGCTCGATCCCAACGATGCCGGCTGCCGTTGGGTCCTGGCTTACCT
GTTTGCCTATGAGCGCGACTTCGCCGAAGCGGATGCGGCATTCGCCAAGGCGATCGAGCTCGACCCGAATGAGGCCGATA
CTTTTGCGGCGCTATCGGACATCACCGTCCTTGCCGGCCGGGTCGGCGAGGGGCTCGAGCATATTCGCAAAGCGTTCCGG
CTGAACCCGTTTCCGGCAAGCTGGTACTATCTGACGCTCGGCCAGGCGCAATATGCGGCCGGGCAATATGCGGCCGCCGT
CGAGACGCTGCGCCGCGACGAGACCTATCGCACAAGCTCACGCCGTTTCCTCGCGGCAAGCCTTGCCCAGCTCGGCCGGC
TCGACGAGGCACGCGCCGAGACCGATCTCTTCCTCGTCGCCAACCCGCATTTCTCCATTCGCCACTGGGCGGCGACCGAG
CCATTCCGCGACGCTCGGACGCTCGAGCATTTCGTCGATGGCTACCGCAAGGCCGGACTTCCCGAGTGA

Upstream 100 bases:

>100_bases
GGCAGAGTGGTCGCCGCCATTACTGCTCGCATCCTCGATACCACGCGGACTAAGCGGACGAACAGTTTCATCCAAGCTTT
AAAGACTCTAGGATGCGTCT

Downstream 100 bases:

>100_bases
TCGCCGGGCCGCGCCGCCCGCCAGACCAAGGGAACCAGCACCAGGGCGACTGCCGGAAGCACGATCCAGTTGATCGTTTC
CCAGCCGGAGCTGTGGAGAA

Product: transcriptional regulator

Products: NA

Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MQASRFAFGPFVLDPAAGTLLRNDDPVAVGDRGVKLLAALVGRPGEILGKAELMDAAWPGRAVEEGNLTVQIAQLRKLLG
PAADGGEWIATVPRVGYRFTGALNLLGGVKRKALPLPDRLSIAVLPFLNISDDPEQEFFADGLTEDLITDLSRMPGLFVI
ARNSAFSYKGKAVDMREIAGELGVRYLLEGSARRAAGRVRINAKLIDAVSGDHLWAERFDRSLDDIFAVQDEVAEKIVEA
LLGRLRAPPPRNRPSSLEAYDLCVRARRLMDDSPQAAEEAHLMLTRAISLDPDYAEAYRWLAMNHWMGRIHSGGPTEFNR
NLALELARRAVTLDPNDAGCRWVLAYLFAYERDFAEADAAFAKAIELDPNEADTFAALSDITVLAGRVGEGLEHIRKAFR
LNPFPASWYYLTLGQAQYAAGQYAAAVETLRRDETYRTSSRRFLAASLAQLGRLDEARAETDLFLVANPHFSIRHWAATE
PFRDARTLEHFVDGYRKAGLPE

Sequences:

>Translated_502_residues
MQASRFAFGPFVLDPAAGTLLRNDDPVAVGDRGVKLLAALVGRPGEILGKAELMDAAWPGRAVEEGNLTVQIAQLRKLLG
PAADGGEWIATVPRVGYRFTGALNLLGGVKRKALPLPDRLSIAVLPFLNISDDPEQEFFADGLTEDLITDLSRMPGLFVI
ARNSAFSYKGKAVDMREIAGELGVRYLLEGSARRAAGRVRINAKLIDAVSGDHLWAERFDRSLDDIFAVQDEVAEKIVEA
LLGRLRAPPPRNRPSSLEAYDLCVRARRLMDDSPQAAEEAHLMLTRAISLDPDYAEAYRWLAMNHWMGRIHSGGPTEFNR
NLALELARRAVTLDPNDAGCRWVLAYLFAYERDFAEADAAFAKAIELDPNEADTFAALSDITVLAGRVGEGLEHIRKAFR
LNPFPASWYYLTLGQAQYAAGQYAAAVETLRRDETYRTSSRRFLAASLAQLGRLDEARAETDLFLVANPHFSIRHWAATE
PFRDARTLEHFVDGYRKAGLPE
>Mature_502_residues
MQASRFAFGPFVLDPAAGTLLRNDDPVAVGDRGVKLLAALVGRPGEILGKAELMDAAWPGRAVEEGNLTVQIAQLRKLLG
PAADGGEWIATVPRVGYRFTGALNLLGGVKRKALPLPDRLSIAVLPFLNISDDPEQEFFADGLTEDLITDLSRMPGLFVI
ARNSAFSYKGKAVDMREIAGELGVRYLLEGSARRAAGRVRINAKLIDAVSGDHLWAERFDRSLDDIFAVQDEVAEKIVEA
LLGRLRAPPPRNRPSSLEAYDLCVRARRLMDDSPQAAEEAHLMLTRAISLDPDYAEAYRWLAMNHWMGRIHSGGPTEFNR
NLALELARRAVTLDPNDAGCRWVLAYLFAYERDFAEADAAFAKAIELDPNEADTFAALSDITVLAGRVGEGLEHIRKAFR
LNPFPASWYYLTLGQAQYAAGQYAAAVETLRRDETYRTSSRRFLAASLAQLGRLDEARAETDLFLVANPHFSIRHWAATE
PFRDARTLEHFVDGYRKAGLPE

Specific function: Required For Pcad Induction, A Promoter Upstream Of Cadb That Is Responsible For The Ph-Regulated Expression Of Cada. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]

EC number: =4.6.1.1 [H]

Molecular weight: Translated: 55463; Mature: 55463

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQASRFAFGPFVLDPAAGTLLRNDDPVAVGDRGVKLLAALVGRPGEILGKAELMDAAWPG
CCCCCCCCCCEEECCCCCCEECCCCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
RAVEEGNLTVQIAQLRKLLGPAADGGEWIATVPRVGYRFTGALNLLGGVKRKALPLPDRL
CCEECCCCEEEHHHHHHHHCCCCCCCCEEEECCCCCEEHHHHHHHHHCHHHCCCCCCCCC
SIAVLPFLNISDDPEQEFFADGLTEDLITDLSRMPGLFVIARNSAFSYKGKAVDMREIAG
CEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHH
ELGVRYLLEGSARRAAGRVRINAKLIDAVSGDHLWAERFDRSLDDIFAVQDEVAEKIVEA
HHCHHHHHCCCHHHCCCEEEEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LLGRLRAPPPRNRPSSLEAYDLCVRARRLMDDSPQAAEEAHLMLTRAISLDPDYAEAYRW
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
LAMNHWMGRIHSGGPTEFNRNLALELARRAVTLDPNDAGCRWVLAYLFAYERDFAEADAA
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
FAKAIELDPNEADTFAALSDITVLAGRVGEGLEHIRKAFRLNPFPASWYYLTLGQAQYAA
HHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHH
GQYAAAVETLRRDETYRTSSRRFLAASLAQLGRLDEARAETDLFLVANPHFSIRHWAATE
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEECCCCCEEECCCCC
PFRDARTLEHFVDGYRKAGLPE
CHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQASRFAFGPFVLDPAAGTLLRNDDPVAVGDRGVKLLAALVGRPGEILGKAELMDAAWPG
CCCCCCCCCCEEECCCCCCEECCCCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
RAVEEGNLTVQIAQLRKLLGPAADGGEWIATVPRVGYRFTGALNLLGGVKRKALPLPDRL
CCEECCCCEEEHHHHHHHHCCCCCCCCEEEECCCCCEEHHHHHHHHHCHHHCCCCCCCCC
SIAVLPFLNISDDPEQEFFADGLTEDLITDLSRMPGLFVIARNSAFSYKGKAVDMREIAG
CEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHH
ELGVRYLLEGSARRAAGRVRINAKLIDAVSGDHLWAERFDRSLDDIFAVQDEVAEKIVEA
HHCHHHHHCCCHHHCCCEEEEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LLGRLRAPPPRNRPSSLEAYDLCVRARRLMDDSPQAAEEAHLMLTRAISLDPDYAEAYRW
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
LAMNHWMGRIHSGGPTEFNRNLALELARRAVTLDPNDAGCRWVLAYLFAYERDFAEADAA
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
FAKAIELDPNEADTFAALSDITVLAGRVGEGLEHIRKAFRLNPFPASWYYLTLGQAQYAA
HHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHH
GQYAAAVETLRRDETYRTSSRRFLAASLAQLGRLDEARAETDLFLVANPHFSIRHWAATE
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEECCCCCEEECCCCC
PFRDARTLEHFVDGYRKAGLPE
CHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10485295; 11481432 [H]