| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is cya3 [H]
Identifier: 209549374
GI number: 209549374
Start: 1822387
End: 1823895
Strand: Direct
Name: cya3 [H]
Synonym: Rleg2_1779
Alternate gene names: 209549374
Gene position: 1822387-1823895 (Clockwise)
Preceding gene: 209549372
Following gene: 209549379
Centisome position: 40.16
GC content: 64.28
Gene sequence:
>1509_bases ATGCAGGCATCGCGTTTTGCCTTTGGTCCGTTCGTGCTTGATCCGGCTGCGGGAACGCTCCTTCGGAATGACGATCCCGT GGCCGTCGGCGACCGCGGGGTGAAGCTGCTTGCGGCGCTCGTCGGGCGGCCTGGAGAAATTCTCGGCAAGGCCGAGTTGA TGGATGCGGCCTGGCCGGGCAGGGCGGTGGAGGAGGGCAACCTCACCGTCCAGATCGCGCAGCTGCGAAAGCTGCTTGGC CCGGCTGCTGACGGCGGCGAGTGGATTGCCACGGTTCCGCGCGTCGGCTACCGCTTCACCGGAGCCTTAAATCTGCTCGG CGGCGTCAAACGAAAGGCTTTGCCGCTGCCCGACAGGCTATCCATTGCTGTGCTGCCCTTCCTCAATATCAGCGATGACC CCGAGCAGGAATTCTTCGCCGATGGGCTGACCGAAGACCTGATTACCGACCTTTCCAGGATGCCGGGTCTGTTCGTTATC GCCCGCAACTCGGCGTTTTCCTACAAGGGAAAGGCGGTTGACATGCGAGAGATCGCCGGGGAACTCGGCGTGCGCTACCT GCTCGAAGGCAGCGCCCGACGCGCCGCAGGACGGGTCCGCATCAATGCCAAGCTGATCGACGCCGTCAGCGGCGATCACC TATGGGCCGAACGCTTCGATCGCAGCCTCGACGATATCTTTGCCGTTCAGGATGAGGTGGCGGAGAAGATCGTCGAGGCG CTCCTCGGGCGGCTGCGCGCGCCACCGCCGCGCAATCGGCCAAGCAGCCTCGAGGCTTACGACCTCTGTGTGCGGGCGCG CAGGCTGATGGATGATTCCCCGCAGGCGGCTGAGGAAGCGCATCTGATGCTAACGCGCGCCATCTCCCTCGACCCTGATT ATGCCGAGGCCTATCGCTGGCTTGCCATGAACCACTGGATGGGACGGATCCATAGCGGCGGGCCGACGGAATTCAACCGT AACCTCGCTTTAGAACTGGCACGCAGGGCCGTCACGCTCGATCCCAACGATGCCGGCTGCCGTTGGGTCCTGGCTTACCT GTTTGCCTATGAGCGCGACTTCGCCGAAGCGGATGCGGCATTCGCCAAGGCGATCGAGCTCGACCCGAATGAGGCCGATA CTTTTGCGGCGCTATCGGACATCACCGTCCTTGCCGGCCGGGTCGGCGAGGGGCTCGAGCATATTCGCAAAGCGTTCCGG CTGAACCCGTTTCCGGCAAGCTGGTACTATCTGACGCTCGGCCAGGCGCAATATGCGGCCGGGCAATATGCGGCCGCCGT CGAGACGCTGCGCCGCGACGAGACCTATCGCACAAGCTCACGCCGTTTCCTCGCGGCAAGCCTTGCCCAGCTCGGCCGGC TCGACGAGGCACGCGCCGAGACCGATCTCTTCCTCGTCGCCAACCCGCATTTCTCCATTCGCCACTGGGCGGCGACCGAG CCATTCCGCGACGCTCGGACGCTCGAGCATTTCGTCGATGGCTACCGCAAGGCCGGACTTCCCGAGTGA
Upstream 100 bases:
>100_bases GGCAGAGTGGTCGCCGCCATTACTGCTCGCATCCTCGATACCACGCGGACTAAGCGGACGAACAGTTTCATCCAAGCTTT AAAGACTCTAGGATGCGTCT
Downstream 100 bases:
>100_bases TCGCCGGGCCGCGCCGCCCGCCAGACCAAGGGAACCAGCACCAGGGCGACTGCCGGAAGCACGATCCAGTTGATCGTTTC CCAGCCGGAGCTGTGGAGAA
Product: transcriptional regulator
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MQASRFAFGPFVLDPAAGTLLRNDDPVAVGDRGVKLLAALVGRPGEILGKAELMDAAWPGRAVEEGNLTVQIAQLRKLLG PAADGGEWIATVPRVGYRFTGALNLLGGVKRKALPLPDRLSIAVLPFLNISDDPEQEFFADGLTEDLITDLSRMPGLFVI ARNSAFSYKGKAVDMREIAGELGVRYLLEGSARRAAGRVRINAKLIDAVSGDHLWAERFDRSLDDIFAVQDEVAEKIVEA LLGRLRAPPPRNRPSSLEAYDLCVRARRLMDDSPQAAEEAHLMLTRAISLDPDYAEAYRWLAMNHWMGRIHSGGPTEFNR NLALELARRAVTLDPNDAGCRWVLAYLFAYERDFAEADAAFAKAIELDPNEADTFAALSDITVLAGRVGEGLEHIRKAFR LNPFPASWYYLTLGQAQYAAGQYAAAVETLRRDETYRTSSRRFLAASLAQLGRLDEARAETDLFLVANPHFSIRHWAATE PFRDARTLEHFVDGYRKAGLPE
Sequences:
>Translated_502_residues MQASRFAFGPFVLDPAAGTLLRNDDPVAVGDRGVKLLAALVGRPGEILGKAELMDAAWPGRAVEEGNLTVQIAQLRKLLG PAADGGEWIATVPRVGYRFTGALNLLGGVKRKALPLPDRLSIAVLPFLNISDDPEQEFFADGLTEDLITDLSRMPGLFVI ARNSAFSYKGKAVDMREIAGELGVRYLLEGSARRAAGRVRINAKLIDAVSGDHLWAERFDRSLDDIFAVQDEVAEKIVEA LLGRLRAPPPRNRPSSLEAYDLCVRARRLMDDSPQAAEEAHLMLTRAISLDPDYAEAYRWLAMNHWMGRIHSGGPTEFNR NLALELARRAVTLDPNDAGCRWVLAYLFAYERDFAEADAAFAKAIELDPNEADTFAALSDITVLAGRVGEGLEHIRKAFR LNPFPASWYYLTLGQAQYAAGQYAAAVETLRRDETYRTSSRRFLAASLAQLGRLDEARAETDLFLVANPHFSIRHWAATE PFRDARTLEHFVDGYRKAGLPE >Mature_502_residues MQASRFAFGPFVLDPAAGTLLRNDDPVAVGDRGVKLLAALVGRPGEILGKAELMDAAWPGRAVEEGNLTVQIAQLRKLLG PAADGGEWIATVPRVGYRFTGALNLLGGVKRKALPLPDRLSIAVLPFLNISDDPEQEFFADGLTEDLITDLSRMPGLFVI ARNSAFSYKGKAVDMREIAGELGVRYLLEGSARRAAGRVRINAKLIDAVSGDHLWAERFDRSLDDIFAVQDEVAEKIVEA LLGRLRAPPPRNRPSSLEAYDLCVRARRLMDDSPQAAEEAHLMLTRAISLDPDYAEAYRWLAMNHWMGRIHSGGPTEFNR NLALELARRAVTLDPNDAGCRWVLAYLFAYERDFAEADAAFAKAIELDPNEADTFAALSDITVLAGRVGEGLEHIRKAFR LNPFPASWYYLTLGQAQYAAGQYAAAVETLRRDETYRTSSRRFLAASLAQLGRLDEARAETDLFLVANPHFSIRHWAATE PFRDARTLEHFVDGYRKAGLPE
Specific function: Required For Pcad Induction, A Promoter Upstream Of Cadb That Is Responsible For The Ph-Regulated Expression Of Cada. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 55463; Mature: 55463
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQASRFAFGPFVLDPAAGTLLRNDDPVAVGDRGVKLLAALVGRPGEILGKAELMDAAWPG CCCCCCCCCCEEECCCCCCEECCCCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHCCCCC RAVEEGNLTVQIAQLRKLLGPAADGGEWIATVPRVGYRFTGALNLLGGVKRKALPLPDRL CCEECCCCEEEHHHHHHHHCCCCCCCCEEEECCCCCEEHHHHHHHHHCHHHCCCCCCCCC SIAVLPFLNISDDPEQEFFADGLTEDLITDLSRMPGLFVIARNSAFSYKGKAVDMREIAG CEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHH ELGVRYLLEGSARRAAGRVRINAKLIDAVSGDHLWAERFDRSLDDIFAVQDEVAEKIVEA HHCHHHHHCCCHHHCCCEEEEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH LLGRLRAPPPRNRPSSLEAYDLCVRARRLMDDSPQAAEEAHLMLTRAISLDPDYAEAYRW HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH LAMNHWMGRIHSGGPTEFNRNLALELARRAVTLDPNDAGCRWVLAYLFAYERDFAEADAA HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHH FAKAIELDPNEADTFAALSDITVLAGRVGEGLEHIRKAFRLNPFPASWYYLTLGQAQYAA HHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHH GQYAAAVETLRRDETYRTSSRRFLAASLAQLGRLDEARAETDLFLVANPHFSIRHWAATE HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEECCCCCEEECCCCC PFRDARTLEHFVDGYRKAGLPE CHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQASRFAFGPFVLDPAAGTLLRNDDPVAVGDRGVKLLAALVGRPGEILGKAELMDAAWPG CCCCCCCCCCEEECCCCCCEECCCCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHCCCCC RAVEEGNLTVQIAQLRKLLGPAADGGEWIATVPRVGYRFTGALNLLGGVKRKALPLPDRL CCEECCCCEEEHHHHHHHHCCCCCCCCEEEECCCCCEEHHHHHHHHHCHHHCCCCCCCCC SIAVLPFLNISDDPEQEFFADGLTEDLITDLSRMPGLFVIARNSAFSYKGKAVDMREIAG CEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHH ELGVRYLLEGSARRAAGRVRINAKLIDAVSGDHLWAERFDRSLDDIFAVQDEVAEKIVEA HHCHHHHHCCCHHHCCCEEEEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH LLGRLRAPPPRNRPSSLEAYDLCVRARRLMDDSPQAAEEAHLMLTRAISLDPDYAEAYRW HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH LAMNHWMGRIHSGGPTEFNRNLALELARRAVTLDPNDAGCRWVLAYLFAYERDFAEADAA HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHH FAKAIELDPNEADTFAALSDITVLAGRVGEGLEHIRKAFRLNPFPASWYYLTLGQAQYAA HHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHH GQYAAAVETLRRDETYRTSSRRFLAASLAQLGRLDEARAETDLFLVANPHFSIRHWAATE HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEECCCCCEEECCCCC PFRDARTLEHFVDGYRKAGLPE CHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]