| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is pah [H]
Identifier: 209549372
GI number: 209549372
Start: 1820640
End: 1821551
Strand: Direct
Name: pah [H]
Synonym: Rleg2_1777
Alternate gene names: 209549372
Gene position: 1820640-1821551 (Clockwise)
Preceding gene: 209549370
Following gene: 209549374
Centisome position: 40.12
GC content: 65.57
Gene sequence:
>912_bases ATGACCACCTCGCCCTCCTTTCTCGGCCTTCCCAATCGCCTCGCTGATGACCGGTTGCCCCGCGCGGTGATTTTCGCGGC CGCTCATGGCACCACCTATCCCGGCAAGGACGGCAGCGGCTATGCCTTGGCGGCCGGCGCCATCCGTTCTGCAAGCCAGG ACGATGCCGGTCTCATCGAGCACTGGGATTTCGATCTCGGCGGTCCGCTGTTCGACGGCAAGCCGATCTCATGCATCGAC GCCGGCGATGTCGAGACCGCCATGCGCGACAATATCGGCAACCGGGCGCGGATCGAGGCGAAGACGCGCGAGGTATTGGC ACTGCCGGCCATACCGATCCTGCTCGGCGGCGACTGTTCCGTGACCATTCCTTTCCTTGCCGGCTTTGCGGCGCAAGGGC CGGTCTGGGTCCTGCAGATCGACGCCCATATCGATTGGCGCGACGAGGTGCATGGCGAACATCACGGCTATTCCAGTCCG ATGCGCCGGGCGAGCGAGATGTCGCATGTCGCCGGCATGGTGCAGGTCGGCCTGCGCAGCGTCGGCAGCGCGCGCACCGC CGACATCGAAGCGGCGCAACGCTATGGTAGCTGTTTTGTCACCGCTCGCGAGGTTCATAGCCAGGGCGTCGGCGCCGCCC TCCAGCATATCCCGGAAGGAGCGCAGGTCGTCGTCACCCTTGATTGCGACAGCATCGATCCCGGCATCATGCCCGGTGTG GCGGCGCGGACCCCTGGTGGCCTCACCTACACTGAAGTGATCGACCTGATTGCGGGCCTCGGCAGGCGGGCGAGGATCGC AGGATTCGACCTTGTCGAGTTCTATCCTCCTGCCGACATCGACGGCCTGTCGGCGCTCACCGCCTCGCGGCTTCTCGTCA ATGCGATCGGCGCCATCGTCCGGCAGGCTTGA
Upstream 100 bases:
>100_bases GCGGGATATGGCGAGCGGCGTAATTAAGCTCTCCCAAAAAGTTCTCAAAAATTTCCAAAGGCGCTAAACAGGTCAGGATC GAACGCAGGACCATCAGGAA
Downstream 100 bases:
>100_bases TCCTGCTTCTCGCAGCAAGCCGTCCACGGGGTGATTGCGCTTTTTCTCCTAGGCAACTTTGCCCAGACGTGGCTCCGTCC CAGCCAGAAGCCGCTGAAAG
Product: arginase/agmatinase/formiminoglutamase
Products: NA
Alternate protein names: Proclavaminic acid amidino hydrolase [H]
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTTSPSFLGLPNRLADDRLPRAVIFAAAHGTTYPGKDGSGYALAAGAIRSASQDDAGLIEHWDFDLGGPLFDGKPISCID AGDVETAMRDNIGNRARIEAKTREVLALPAIPILLGGDCSVTIPFLAGFAAQGPVWVLQIDAHIDWRDEVHGEHHGYSSP MRRASEMSHVAGMVQVGLRSVGSARTADIEAAQRYGSCFVTAREVHSQGVGAALQHIPEGAQVVVTLDCDSIDPGIMPGV AARTPGGLTYTEVIDLIAGLGRRARIAGFDLVEFYPPADIDGLSALTASRLLVNAIGAIVRQA
Sequences:
>Translated_303_residues MTTSPSFLGLPNRLADDRLPRAVIFAAAHGTTYPGKDGSGYALAAGAIRSASQDDAGLIEHWDFDLGGPLFDGKPISCID AGDVETAMRDNIGNRARIEAKTREVLALPAIPILLGGDCSVTIPFLAGFAAQGPVWVLQIDAHIDWRDEVHGEHHGYSSP MRRASEMSHVAGMVQVGLRSVGSARTADIEAAQRYGSCFVTAREVHSQGVGAALQHIPEGAQVVVTLDCDSIDPGIMPGV AARTPGGLTYTEVIDLIAGLGRRARIAGFDLVEFYPPADIDGLSALTASRLLVNAIGAIVRQA >Mature_302_residues TTSPSFLGLPNRLADDRLPRAVIFAAAHGTTYPGKDGSGYALAAGAIRSASQDDAGLIEHWDFDLGGPLFDGKPISCIDA GDVETAMRDNIGNRARIEAKTREVLALPAIPILLGGDCSVTIPFLAGFAAQGPVWVLQIDAHIDWRDEVHGEHHGYSSPM RRASEMSHVAGMVQVGLRSVGSARTADIEAAQRYGSCFVTAREVHSQGVGAALQHIPEGAQVVVTLDCDSIDPGIMPGVA ARTPGGLTYTEVIDLIAGLGRRARIAGFDLVEFYPPADIDGLSALTASRLLVNAIGAIVRQA
Specific function: Catalyzes The Formation Of Putrescine From Agmatine. [C]
COG id: COG0010
COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginase family [H]
Homologues:
Organism=Homo sapiens, GI37537722, Length=229, Percent_Identity=30.5676855895196, Blast_Score=100, Evalue=3e-21, Organism=Escherichia coli, GI1789306, Length=244, Percent_Identity=28.6885245901639, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005925 - InterPro: IPR006035 - InterPro: IPR020855 [H]
Pfam domain/function: PF00491 Arginase [H]
EC number: =3.5.3.22 [H]
Molecular weight: Translated: 31843; Mature: 31712
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00148 ARGINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSPSFLGLPNRLADDRLPRAVIFAAAHGTTYPGKDGSGYALAAGAIRSASQDDAGLIE CCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEHHHHHCCCCCCCCCCE HWDFDLGGPLFDGKPISCIDAGDVETAMRDNIGNRARIEAKTREVLALPAIPILLGGDCS ECCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCEEEEHHHHHEEECCCEEEEECCCCC VTIPFLAGFAAQGPVWVLQIDAHIDWRDEVHGEHHGYSSPMRRASEMSHVAGMVQVGLRS EEHHHHHCCCCCCCEEEEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VGSARTADIEAAQRYGSCFVTAREVHSQGVGAALQHIPEGAQVVVTLDCDSIDPGIMPGV CCCCCHHHHHHHHHHCCEEEEHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCC AARTPGGLTYTEVIDLIAGLGRRARIAGFDLVEFYPPADIDGLSALTASRLLVNAIGAIV CCCCCCCCHHHHHHHHHHCCCCCEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHH RQA HCC >Mature Secondary Structure TTSPSFLGLPNRLADDRLPRAVIFAAAHGTTYPGKDGSGYALAAGAIRSASQDDAGLIE CCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEHHHHHCCCCCCCCCCE HWDFDLGGPLFDGKPISCIDAGDVETAMRDNIGNRARIEAKTREVLALPAIPILLGGDCS ECCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCEEEEHHHHHEEECCCEEEEECCCCC VTIPFLAGFAAQGPVWVLQIDAHIDWRDEVHGEHHGYSSPMRRASEMSHVAGMVQVGLRS EEHHHHHCCCCCCCEEEEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VGSARTADIEAAQRYGSCFVTAREVHSQGVGAALQHIPEGAQVVVTLDCDSIDPGIMPGV CCCCCHHHHHHHHHHCCEEEEHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCC AARTPGGLTYTEVIDLIAGLGRRARIAGFDLVEFYPPADIDGLSALTASRLLVNAIGAIV CCCCCCCCHHHHHHHHHHCCCCCEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHH RQA HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8088547 [H]