| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is ttuD [H]
Identifier: 209549064
GI number: 209549064
Start: 1488135
End: 1489409
Strand: Reverse
Name: ttuD [H]
Synonym: Rleg2_1461
Alternate gene names: 209549064
Gene position: 1489409-1488135 (Counterclockwise)
Preceding gene: 209549066
Following gene: 209549058
Centisome position: 32.82
GC content: 66.04
Gene sequence:
>1275_bases ATGACGATAAGCGCTCCCCGCGATTTCCTGAAAAGCCTGTTCGATGCGGCGGTTCGCGCCGCTGATCCGCTGACCGGCAT CAAGGCAAACCTGCCTGATCGGCCGAAGGGAAAGACCGTGGTGATCGGTGCCGGCAAGGGTGCCGCGCAGATGGCGCGGG CGCTCGAAAGCGTCTGGGACGGGCCGCTCGACGGTCTAGTGGTCACACGCTACGGCTATGGCTGCGACACACGCGACATC GCGATCATCGAGGCTGCCCATCCTGTTCCCGATGCGGCGGGACGTGCCGCGGCAAGTCGGCTGGTGGAGACGGTGAGCGG ACTGACGGAAGACGATCTGGTGATCGCGCTGATCTGCGGTGGCGGCTCGGCGCTGCTGCCCGCCCCGCCGGTGGGGCTGA CCCTCGAAGACGAGATTGCCCTCAACGAAATGCTGCTTGCCTCGGGCGCGCCGATCTCGGCGATGAACGTCGTGCGCAAG CATCTCTCGACCATCAAAGGCGGCAGACTTGCGGCGGCAACCAGAGCAAGGGTCGTCAGCCTGATCGTCTCCGATATTCC CGGCGACAATCCGGCCCACGTCGCCTCCGGGCCGACCGTGCCTGATGGTTCGACGCGGCACGATGCGCTTGAGATCGTCA AGCAATATGGATTGCAGCTGCCGCAGGCAGCCCTCGACCATCTGAACTCAGCCAAGGCCGATGCACCGCGGCCGGACGAT CCGGTGTTTTTACGCCACGCGCATCACATCATTGCCTCTGCCGGCGTGTCGCTGGAGGCGGCCGCCGCCCTGGCGAAGTC GCAGGGGATCGAGCCCGCCATCCTTTCGGATGCGATCGAGGGAGAATCGCGCGACGTGGCGCTGGTGCATGCGGCAATCG CCCGTGAGGTGCTCGGCCGGAACAGGCCGTTTCCGAAGCCGGTCGTCATCCTGTCCGGCGGCGAGACAACGGTGACGCTC CGCGCCAAGGGCGCCAAGGGCGGCAAGGGCGGGCGCAACGGCGAATTCGCGCTCGCCATGGCGCTTGCGATCGACGGACA GGAGGGCATTCATCTCCTTGCCGCCGACACGGACGGGATCGACGGCTCGGAGGATAATGCCGGCGCCTTTGCCGATGGCG GCACGGTCAAGCGCCTGCGCGCCGCCGGGCTCGATCCGCGCCGGCTGCTCGACGGCAATGACAGTTATTCAGGCTTTGCA GCCGTCGGCGATCTCTTCGAAACGGGGCCGACCGGCACCAACGTCAATGATTTCAGGGCCATCCTGATCCGTTAG
Upstream 100 bases:
>100_bases CCACAACCGTCACACTGCCGCGTCTTCGACCTTGACGCCGGCACGGGGATGCGTCGACAGTCGGCATCACGTTCGACACT CCAGGCAGCAGAGACCACCG
Downstream 100 bases:
>100_bases CCGGCGGCGGATCAGGTCTCGATCCGCCCCTGCCCGACCAGCCAGTCAACCGATTCCTGCACCGCCTGCAGCGACGTATA TCTCGGCGCATAGCCGAGCA
Product: hydroxypyruvate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MTISAPRDFLKSLFDAAVRAADPLTGIKANLPDRPKGKTVVIGAGKGAAQMARALESVWDGPLDGLVVTRYGYGCDTRDI AIIEAAHPVPDAAGRAAASRLVETVSGLTEDDLVIALICGGGSALLPAPPVGLTLEDEIALNEMLLASGAPISAMNVVRK HLSTIKGGRLAAATRARVVSLIVSDIPGDNPAHVASGPTVPDGSTRHDALEIVKQYGLQLPQAALDHLNSAKADAPRPDD PVFLRHAHHIIASAGVSLEAAAALAKSQGIEPAILSDAIEGESRDVALVHAAIAREVLGRNRPFPKPVVILSGGETTVTL RAKGAKGGKGGRNGEFALAMALAIDGQEGIHLLAADTDGIDGSEDNAGAFADGGTVKRLRAAGLDPRRLLDGNDSYSGFA AVGDLFETGPTGTNVNDFRAILIR
Sequences:
>Translated_424_residues MTISAPRDFLKSLFDAAVRAADPLTGIKANLPDRPKGKTVVIGAGKGAAQMARALESVWDGPLDGLVVTRYGYGCDTRDI AIIEAAHPVPDAAGRAAASRLVETVSGLTEDDLVIALICGGGSALLPAPPVGLTLEDEIALNEMLLASGAPISAMNVVRK HLSTIKGGRLAAATRARVVSLIVSDIPGDNPAHVASGPTVPDGSTRHDALEIVKQYGLQLPQAALDHLNSAKADAPRPDD PVFLRHAHHIIASAGVSLEAAAALAKSQGIEPAILSDAIEGESRDVALVHAAIAREVLGRNRPFPKPVVILSGGETTVTL RAKGAKGGKGGRNGEFALAMALAIDGQEGIHLLAADTDGIDGSEDNAGAFADGGTVKRLRAAGLDPRRLLDGNDSYSGFA AVGDLFETGPTGTNVNDFRAILIR >Mature_423_residues TISAPRDFLKSLFDAAVRAADPLTGIKANLPDRPKGKTVVIGAGKGAAQMARALESVWDGPLDGLVVTRYGYGCDTRDIA IIEAAHPVPDAAGRAAASRLVETVSGLTEDDLVIALICGGGSALLPAPPVGLTLEDEIALNEMLLASGAPISAMNVVRKH LSTIKGGRLAAATRARVVSLIVSDIPGDNPAHVASGPTVPDGSTRHDALEIVKQYGLQLPQAALDHLNSAKADAPRPDDP VFLRHAHHIIASAGVSLEAAAALAKSQGIEPAILSDAIEGESRDVALVHAAIAREVLGRNRPFPKPVVILSGGETTVTLR AKGAKGGKGGRNGEFALAMALAIDGQEGIHLLAADTDGIDGSEDNAGAFADGGTVKRLRAAGLDPRRLLDGNDSYSGFAA VGDLFETGPTGTNVNDFRAILIR
Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]
COG id: COG2379
COG function: function code G; Putative glycerate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI31543063, Length=385, Percent_Identity=34.8051948051948, Blast_Score=166, Evalue=4e-41, Organism=Caenorhabditis elegans, GI193205461, Length=463, Percent_Identity=28.7257019438445, Blast_Score=132, Evalue=2e-31, Organism=Drosophila melanogaster, GI19920578, Length=387, Percent_Identity=29.9741602067183, Blast_Score=125, Evalue=7e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007835 [H]
Pfam domain/function: PF05161 MOFRL [H]
EC number: =1.1.1.81 [H]
Molecular weight: Translated: 43564; Mature: 43433
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISAPRDFLKSLFDAAVRAADPLTGIKANLPDRPKGKTVVIGAGKGAAQMARALESVWD CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHC GPLDGLVVTRYGYGCDTRDIAIIEAAHPVPDAAGRAAASRLVETVSGLTEDDLVIALICG CCCCCEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEC GGSALLPAPPVGLTLEDEIALNEMLLASGAPISAMNVVRKHLSTIKGGRLAAATRARVVS CCCCCCCCCCCCCEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LIVSDIPGDNPAHVASGPTVPDGSTRHDALEIVKQYGLQLPQAALDHLNSAKADAPRPDD HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCC PVFLRHAHHIIASAGVSLEAAAALAKSQGIEPAILSDAIEGESRDVALVHAAIAREVLGR CHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHC NRPFPKPVVILSGGETTVTLRAKGAKGGKGGRNGEFALAMALAIDGQEGIHLLAADTDGI CCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCC DGSEDNAGAFADGGTVKRLRAAGLDPRRLLDGNDSYSGFAAVGDLFETGPTGTNVNDFRA CCCCCCCCCCCCCCHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEE ILIR EEEC >Mature Secondary Structure TISAPRDFLKSLFDAAVRAADPLTGIKANLPDRPKGKTVVIGAGKGAAQMARALESVWD CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHC GPLDGLVVTRYGYGCDTRDIAIIEAAHPVPDAAGRAAASRLVETVSGLTEDDLVIALICG CCCCCEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEC GGSALLPAPPVGLTLEDEIALNEMLLASGAPISAMNVVRKHLSTIKGGRLAAATRARVVS CCCCCCCCCCCCCEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LIVSDIPGDNPAHVASGPTVPDGSTRHDALEIVKQYGLQLPQAALDHLNSAKADAPRPDD HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCC PVFLRHAHHIIASAGVSLEAAAALAKSQGIEPAILSDAIEGESRDVALVHAAIAREVLGR CHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHC NRPFPKPVVILSGGETTVTLRAKGAKGGKGGRNGEFALAMALAIDGQEGIHLLAADTDGI CCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCC DGSEDNAGAFADGGTVKRLRAAGLDPRRLLDGNDSYSGFAAVGDLFETGPTGTNVNDFRA CCCCCCCCCCCCCCHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEE ILIR EEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7592429 [H]