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The map label for this gene is yiaN [C]

Identifier: 209549059

GI number: 209549059

Start: 1482177

End: 1484003

Strand: Direct

Name: yiaN [C]

Synonym: Rleg2_1456

Alternate gene names: 209549059

Gene position: 1482177-1484003 (Clockwise)

Preceding gene: 209549052

Following gene: 209549060

Centisome position: 32.66

GC content: 64.97

Gene sequence:

>1827_bases
TTGGCCACCAGTGAATTTCATCCGATCGAGCGGGCCGGGGATGACGGGATCGCGGCGCGGGCGCTGCGGGCGCTCGAGGC
GGTGCTCGGCATAGCCGCAGCGCTCGTGCTCGCCGTGCTGCTCGCCATGGTGCTCGTCACCGTCTGCCTGCGCTATTTCT
TCGGCACCGGCTTCATTGGCGCCGAGGATCTCGGCATCTGGCTGCATGTGGCACTGATTGCGCTCGGCGCACCGCTCAGC
CTCAACAGTGCGCTTGCCATGCGCCTCGATGTTTTCGTCAGGATGCTGCCCGAAAGCCTGCAGAAGGTGACGCGGATCGG
CGCCGATGTCTTCACCGTGCTTTCGGCGTTGATCCTCGCCTTCGGCGGCAGCGAGATCATGACGATGCTCGGCGGCGTCT
CGCCGACGCTCGGTCTGCCGGAATGGATCCGCTTCGGCTTCCTCGGCGCCGGCGGCGCGCTGATCCTCATTGTGCTGCTT
CTGCAGCGCATCGCCGAAGGCAAGGTCCTGGCGGTTGCTGTTTCGCTGACCCTCGGTGTCGCTCTCTATGCCGGCATCCC
GCATATCTCGCTTGATCTCGACTGGCCGCCGAGCATTTTCCTCGGGCTGATCGCGGCGATCGGTCTGGTGCTGGCTGCAC
CGCTACCGCACGCCTTTCTCGCCGCAGCCTATGTCGTCATCGCCTTCGGCAGCAGCCTGCCGGAGCCGGCGATCGTTTCC
TCCACCGTCACCGGCATATCGAAATTCCTGCTGCTCGCTATTCCCTTCTTCCTGCTTGCCGGCGGCCTGTTGACGGCATC
AGGTGTGGCCAATCAGCTGGTGCGTTTTGCCGCCGCCATGGTCGGCCATCGCCGGGCAGGGCTGGCGCAGACGACACTTC
TGACCAGCGTTCTCTTTTCCGGCGCTTCAGGATCCTCGGTCGCAAATGCTGCTTTCGGCGCGTCGACGTTCCAGCCGGAA
CTGGTCAAGCACGGCTATCCCCCGGCGCAGGCGGCAGCGATTATCGCCTCGACATCGGTTCTCGACAACATCATCCCGCC
GTCGATTGCCTTTCTCATTCTTGCCTCGGCGACCAATCTTTCCGTCGGCGCGCTGCTGGTCGGCGGCTTCTTCGCCGGCG
GGCTGATGGCCATCTGCCTGGCTGTCGCCATCCATCTGACTGTGCGCGAGCAGGTGACCTTGCCGCGCGCGACCGCCAGG
CAGCGCTGGCAATCGGCGGTCCAGGCGATTCCGGCCTTCGGGCTCGGGGTCATCGTGGTCGTCGGCATCCGCATCGGCAT
CGTCACCACGACGGAGGCGGCAGCGCTCGCCGCCTTCTACACGCTGCTGCTCGGCATCGGCGCGCGGCTCGGCATCCTCT
CGCTCTATGCCGCCTTCCGCCAGGCGGCGGTCGAGGCAGCGGCGATCGGTTTGCTGATCGGCACGGCCGGCCCCTTCGCT
TTCCTGCTCGCCGTCGACGACGTCTCCGGACTGATCTCGCATCTGACGACGGCGCTTGGCGGCAGCGCGCTTGCCGTTAT
CCTTTTGTCGAACGTCATTCTGCTCGCCGTCGGTCTTGTTCTCGATATCGGCGCCGCGATCCTGCTCTTCGGCCCGATCC
TGATGCCGGCAGCGGTTGCCGCCGGCATCGATCCCATCCAGTTCGGTGTGATTATCGTCGTCAACCTGATGATCCACGGG
CTGACACCGCCGCTCGGCATGCTGATTTTCGTTGTCAGCGGCGTCACCCGCATTCCTGCCTCAGAACTCTTCCGGGCCGT
CGTTCCCTATCTGCTCGCCCTTCTGGTCTCGCTGGCAATCCTCTGCGCCTGGGCCATCATTTTCTAG

Upstream 100 bases:

>100_bases
TTGAGGAAGCGCTCCGTTTCAGCGAAAAGGCATGACGCTTTTCGACTTCCATCTTTTGAAGGTCGGCAGCGCCTGATCCT
CGGGAAAGAAGGCAGGTTTA

Downstream 100 bases:

>100_bases
TGAACAGGACAATACCATGAACAATCTCAACCGACGTAATTTCCTGAGGACCGCCGCTCTAACCGGTACGGCGCTTGCGG
CGCCAGGCTTTGTCCGCACA

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 608; Mature: 607

Protein sequence:

>608_residues
MATSEFHPIERAGDDGIAARALRALEAVLGIAAALVLAVLLAMVLVTVCLRYFFGTGFIGAEDLGIWLHVALIALGAPLS
LNSALAMRLDVFVRMLPESLQKVTRIGADVFTVLSALILAFGGSEIMTMLGGVSPTLGLPEWIRFGFLGAGGALILIVLL
LQRIAEGKVLAVAVSLTLGVALYAGIPHISLDLDWPPSIFLGLIAAIGLVLAAPLPHAFLAAAYVVIAFGSSLPEPAIVS
STVTGISKFLLLAIPFFLLAGGLLTASGVANQLVRFAAAMVGHRRAGLAQTTLLTSVLFSGASGSSVANAAFGASTFQPE
LVKHGYPPAQAAAIIASTSVLDNIIPPSIAFLILASATNLSVGALLVGGFFAGGLMAICLAVAIHLTVREQVTLPRATAR
QRWQSAVQAIPAFGLGVIVVVGIRIGIVTTTEAAALAAFYTLLLGIGARLGILSLYAAFRQAAVEAAAIGLLIGTAGPFA
FLLAVDDVSGLISHLTTALGGSALAVILLSNVILLAVGLVLDIGAAILLFGPILMPAAVAAGIDPIQFGVIIVVNLMIHG
LTPPLGMLIFVVSGVTRIPASELFRAVVPYLLALLVSLAILCAWAIIF

Sequences:

>Translated_608_residues
MATSEFHPIERAGDDGIAARALRALEAVLGIAAALVLAVLLAMVLVTVCLRYFFGTGFIGAEDLGIWLHVALIALGAPLS
LNSALAMRLDVFVRMLPESLQKVTRIGADVFTVLSALILAFGGSEIMTMLGGVSPTLGLPEWIRFGFLGAGGALILIVLL
LQRIAEGKVLAVAVSLTLGVALYAGIPHISLDLDWPPSIFLGLIAAIGLVLAAPLPHAFLAAAYVVIAFGSSLPEPAIVS
STVTGISKFLLLAIPFFLLAGGLLTASGVANQLVRFAAAMVGHRRAGLAQTTLLTSVLFSGASGSSVANAAFGASTFQPE
LVKHGYPPAQAAAIIASTSVLDNIIPPSIAFLILASATNLSVGALLVGGFFAGGLMAICLAVAIHLTVREQVTLPRATAR
QRWQSAVQAIPAFGLGVIVVVGIRIGIVTTTEAAALAAFYTLLLGIGARLGILSLYAAFRQAAVEAAAIGLLIGTAGPFA
FLLAVDDVSGLISHLTTALGGSALAVILLSNVILLAVGLVLDIGAAILLFGPILMPAAVAAGIDPIQFGVIIVVNLMIHG
LTPPLGMLIFVVSGVTRIPASELFRAVVPYLLALLVSLAILCAWAIIF
>Mature_607_residues
ATSEFHPIERAGDDGIAARALRALEAVLGIAAALVLAVLLAMVLVTVCLRYFFGTGFIGAEDLGIWLHVALIALGAPLSL
NSALAMRLDVFVRMLPESLQKVTRIGADVFTVLSALILAFGGSEIMTMLGGVSPTLGLPEWIRFGFLGAGGALILIVLLL
QRIAEGKVLAVAVSLTLGVALYAGIPHISLDLDWPPSIFLGLIAAIGLVLAAPLPHAFLAAAYVVIAFGSSLPEPAIVSS
TVTGISKFLLLAIPFFLLAGGLLTASGVANQLVRFAAAMVGHRRAGLAQTTLLTSVLFSGASGSSVANAAFGASTFQPEL
VKHGYPPAQAAAIIASTSVLDNIIPPSIAFLILASATNLSVGALLVGGFFAGGLMAICLAVAIHLTVREQVTLPRATARQ
RWQSAVQAIPAFGLGVIVVVGIRIGIVTTTEAAALAAFYTLLLGIGARLGILSLYAAFRQAAVEAAAIGLLIGTAGPFAF
LLAVDDVSGLISHLTTALGGSALAVILLSNVILLAVGLVLDIGAAILLFGPILMPAAVAAGIDPIQFGVIIVVNLMIHGL
TPPLGMLIFVVSGVTRIPASELFRAVVPYLLALLVSLAILCAWAIIF

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yiaN/ygiK family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=396, Percent_Identity=33.0808080808081, Blast_Score=159, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 62194; Mature: 62063

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSEFHPIERAGDDGIAARALRALEAVLGIAAALVLAVLLAMVLVTVCLRYFFGTGFIG
CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AEDLGIWLHVALIALGAPLSLNSALAMRLDVFVRMLPESLQKVTRIGADVFTVLSALILA
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
FGGSEIMTMLGGVSPTLGLPEWIRFGFLGAGGALILIVLLLQRIAEGKVLAVAVSLTLGV
HCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ALYAGIPHISLDLDWPPSIFLGLIAAIGLVLAAPLPHAFLAAAYVVIAFGSSLPEPAIVS
HHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHH
STVTGISKFLLLAIPFFLLAGGLLTASGVANQLVRFAAAMVGHRRAGLAQTTLLTSVLFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
GASGSSVANAAFGASTFQPELVKHGYPPAQAAAIIASTSVLDNIIPPSIAFLILASATNL
CCCCCCHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
SVGALLVGGFFAGGLMAICLAVAIHLTVREQVTLPRATARQRWQSAVQAIPAFGLGVIVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VGIRIGIVTTTEAAALAAFYTLLLGIGARLGILSLYAAFRQAAVEAAAIGLLIGTAGPFA
HHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
FLLAVDDVSGLISHLTTALGGSALAVILLSNVILLAVGLVLDIGAAILLFGPILMPAAVA
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGIDPIQFGVIIVVNLMIHGLTPPLGMLIFVVSGVTRIPASELFRAVVPYLLALLVSLAI
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHH
LCAWAIIF
HHHHHHHC
>Mature Secondary Structure 
ATSEFHPIERAGDDGIAARALRALEAVLGIAAALVLAVLLAMVLVTVCLRYFFGTGFIG
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AEDLGIWLHVALIALGAPLSLNSALAMRLDVFVRMLPESLQKVTRIGADVFTVLSALILA
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
FGGSEIMTMLGGVSPTLGLPEWIRFGFLGAGGALILIVLLLQRIAEGKVLAVAVSLTLGV
HCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ALYAGIPHISLDLDWPPSIFLGLIAAIGLVLAAPLPHAFLAAAYVVIAFGSSLPEPAIVS
HHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHH
STVTGISKFLLLAIPFFLLAGGLLTASGVANQLVRFAAAMVGHRRAGLAQTTLLTSVLFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
GASGSSVANAAFGASTFQPELVKHGYPPAQAAAIIASTSVLDNIIPPSIAFLILASATNL
CCCCCCHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
SVGALLVGGFFAGGLMAICLAVAIHLTVREQVTLPRATARQRWQSAVQAIPAFGLGVIVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VGIRIGIVTTTEAAALAAFYTLLLGIGARLGILSLYAAFRQAAVEAAAIGLLIGTAGPFA
HHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
FLLAVDDVSGLISHLTTALGGSALAVILLSNVILLAVGLVLDIGAAILLFGPILMPAAVA
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGIDPIQFGVIIVVNLMIHGLTPPLGMLIFVVSGVTRIPASELFRAVVPYLLALLVSLAI
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHH
LCAWAIIF
HHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]