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The map label for this gene is ydiF [H]

Identifier: 209548978

GI number: 209548978

Start: 1394742

End: 1396361

Strand: Direct

Name: ydiF [H]

Synonym: Rleg2_1375

Alternate gene names: 209548978

Gene position: 1394742-1396361 (Clockwise)

Preceding gene: 209548977

Following gene: 209548979

Centisome position: 30.74

GC content: 62.28

Gene sequence:

>1620_bases
ATGCACATGAAGAAGCATCTCACCCCAGCCGAAGCGGCCGCGCTCATCCCGGATGGCGTCGTCGTCACGGTATCGTCTTC
CAGCGGTCTCGGTTGCCCGGACCTCATGCTGAAGGCGATCGGCGAGCGTTTCGAGGCGACCGGCCATCCCCGCGATCTCA
CCACCCTTCATCCGATCGCCGCCGGCGACATGAGCGGCATCAAGGGCGTCGATTACATCGCGAGGAAGGGCCTGCTCAAG
TGCATCATCGGCGGCTCCTATCCGTCCGGGCCGTCATCGTCCGAGCCGCCGCTGATCTGGCAGATGATCACCAACAACGA
GATCCCGGCCTATAACATTCCCTCCGGCATCCTGTTCGACATCCATCGCGAAGCCGCCGCCAAGCGGCCGGGCGTGCTGA
CCAAGGTCGGCGTCGACACATTCGTCGACCCCCGGCGGCAGGGCTGCGCGATGAACGAACTGGCTTCGGAACAACAGGTG
GTCAAGCGCGTCAGCTTCGAGGGCGACGACTGGCTGTTCTTCCCCTCGATCGTCCCTCAGGTCGCCATTATCCGCGCCAC
CACTGCCGACGAGCGCGGCAATCTCACATACGAACATGAAGGCGCCTATCTCGGCGGCCTCGATCAGGCGCTCGCCGTAC
GCAACAATGGCGGCATCGTCATCGCCCAGGTCAAGCGGATCACCAAGGAAGGCTCGCTGAAACCGCATGACGTCCGGGTG
CCGGGCATGCTGGTCGATTATATCGTCGTCGATCCTGATCAGAAGCAGACGACGCAGACGGCGTACGATCCGGCGATTTC
GGGAGAGATCTTCCGCCCGCTCGATAGTTTCCACGTTCCGGAATTCAATGTTCAGAAGGTCATCGCCCGCCGCGTCGCAC
AGGAGCTGCAGGCGGGAAGCTGCGTCAATCTCGGCTTCGGCATCTCGGCCAACGTGCCGCGCATTCTGCTGGAGGAGGGG
CTCCACGGCGCCGTCACCTGGGTTATAGAGCAAGGCGCGGTCGGTGGGGTGCCGCTGCTCGACTTCGCCTTCGGCTGCGC
CTCCAATGCCGACGCCTATATGCCGTCCCCCTATCAGTTCACTTACTTTCAAGGCGCGGGCTTCGATGCGTCGCTGCTCT
CCTTCCTCGAAATCGGCAAGGACGGATCGGTCAACGTCTCCAAACTTTCCTTCCGGCCGCATGTGACGGCGGGCGCCGGC
GGCTTCGTCGACATCACCGCGCGGGCGAAGAAGATCGTCTTTTCAGGCATGTTCAACGCCGGGGCGAAGCTTTCGATCGC
TGACGGGGCTCTGCTCATTGAAAAAGAAGGCAAACTGAAGAAGCTCGTCAACGAGGTCGAACATGTCACCTTCAGCGGCA
GGCGGGCGATCGAGCAGGGGCAGGATATCATCTATGTCACCGAGCGGTGCGTGATGAAGCTGACGCCCGAAGGCATCGTG
CTGACCGAGATCGCGCCCGGTGTCGATCTTCAGTCCCAGATCCTCGATCAGTCCGAATTTCCGCTGATCGTCGCGCCTGA
CCTGAAGGTCATGGATGCGGCACTCTTCGGCGAGGCCGGCATCGGCCTGTCGCTTCCAGCCAAAAGCGCGCGGACGCTGG
AGGGTACTTTCCATGGCTAG

Upstream 100 bases:

>100_bases
CGACAGCCGTTCGGTTGGTCGTTCGCGAAAGCTGCGGCGCCGGCAAGACCGCGCCGGCAAAGGCCGGCAAGAGCGTAAAA
TCGAAACAGGACGCTGAGTA

Downstream 100 bases:

>100_bases
CGGAACAGTCAGGATCGACATTGACGGACATGTTGCGACCTTGACGATTTCTCGTCCGGAGAAGCTGAACGCGCTCGATC
TCGACATGCTGAAAGCCTTG

Product: coenzyme A transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 539

Protein sequence:

>539_residues
MHMKKHLTPAEAAALIPDGVVVTVSSSSGLGCPDLMLKAIGERFEATGHPRDLTTLHPIAAGDMSGIKGVDYIARKGLLK
CIIGGSYPSGPSSSEPPLIWQMITNNEIPAYNIPSGILFDIHREAAAKRPGVLTKVGVDTFVDPRRQGCAMNELASEQQV
VKRVSFEGDDWLFFPSIVPQVAIIRATTADERGNLTYEHEGAYLGGLDQALAVRNNGGIVIAQVKRITKEGSLKPHDVRV
PGMLVDYIVVDPDQKQTTQTAYDPAISGEIFRPLDSFHVPEFNVQKVIARRVAQELQAGSCVNLGFGISANVPRILLEEG
LHGAVTWVIEQGAVGGVPLLDFAFGCASNADAYMPSPYQFTYFQGAGFDASLLSFLEIGKDGSVNVSKLSFRPHVTAGAG
GFVDITARAKKIVFSGMFNAGAKLSIADGALLIEKEGKLKKLVNEVEHVTFSGRRAIEQGQDIIYVTERCVMKLTPEGIV
LTEIAPGVDLQSQILDQSEFPLIVAPDLKVMDAALFGEAGIGLSLPAKSARTLEGTFHG

Sequences:

>Translated_539_residues
MHMKKHLTPAEAAALIPDGVVVTVSSSSGLGCPDLMLKAIGERFEATGHPRDLTTLHPIAAGDMSGIKGVDYIARKGLLK
CIIGGSYPSGPSSSEPPLIWQMITNNEIPAYNIPSGILFDIHREAAAKRPGVLTKVGVDTFVDPRRQGCAMNELASEQQV
VKRVSFEGDDWLFFPSIVPQVAIIRATTADERGNLTYEHEGAYLGGLDQALAVRNNGGIVIAQVKRITKEGSLKPHDVRV
PGMLVDYIVVDPDQKQTTQTAYDPAISGEIFRPLDSFHVPEFNVQKVIARRVAQELQAGSCVNLGFGISANVPRILLEEG
LHGAVTWVIEQGAVGGVPLLDFAFGCASNADAYMPSPYQFTYFQGAGFDASLLSFLEIGKDGSVNVSKLSFRPHVTAGAG
GFVDITARAKKIVFSGMFNAGAKLSIADGALLIEKEGKLKKLVNEVEHVTFSGRRAIEQGQDIIYVTERCVMKLTPEGIV
LTEIAPGVDLQSQILDQSEFPLIVAPDLKVMDAALFGEAGIGLSLPAKSARTLEGTFHG
>Mature_539_residues
MHMKKHLTPAEAAALIPDGVVVTVSSSSGLGCPDLMLKAIGERFEATGHPRDLTTLHPIAAGDMSGIKGVDYIARKGLLK
CIIGGSYPSGPSSSEPPLIWQMITNNEIPAYNIPSGILFDIHREAAAKRPGVLTKVGVDTFVDPRRQGCAMNELASEQQV
VKRVSFEGDDWLFFPSIVPQVAIIRATTADERGNLTYEHEGAYLGGLDQALAVRNNGGIVIAQVKRITKEGSLKPHDVRV
PGMLVDYIVVDPDQKQTTQTAYDPAISGEIFRPLDSFHVPEFNVQKVIARRVAQELQAGSCVNLGFGISANVPRILLEEG
LHGAVTWVIEQGAVGGVPLLDFAFGCASNADAYMPSPYQFTYFQGAGFDASLLSFLEIGKDGSVNVSKLSFRPHVTAGAG
GFVDITARAKKIVFSGMFNAGAKLSIADGALLIEKEGKLKKLVNEVEHVTFSGRRAIEQGQDIIYVTERCVMKLTPEGIV
LTEIAPGVDLQSQILDQSEFPLIVAPDLKVMDAALFGEAGIGLSLPAKSARTLEGTFHG

Specific function: Unknown

COG id: COG4670

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae AtoD [H]

Homologues:

Organism=Escherichia coli, GI1787985, Length=524, Percent_Identity=39.5038167938931, Blast_Score=367, Evalue=1e-102,
Organism=Escherichia coli, GI1788551, Length=252, Percent_Identity=25.3968253968254, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014388
- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: NA

Molecular weight: Translated: 57703; Mature: 57703

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMKKHLTPAEAAALIPDGVVVTVSSSSGLGCPDLMLKAIGERFEATGHPRDLTTLHPIA
CCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCCC
AGDMSGIKGVDYIARKGLLKCIIGGSYPSGPSSSEPPLIWQMITNNEIPAYNIPSGILFD
CCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCCEEE
IHREAAAKRPGVLTKVGVDTFVDPRRQGCAMNELASEQQVVKRVSFEGDDWLFFPSIVPQ
EHHHHHHCCCCCEEECCCHHHCCCHHCCCCHHHHHHHHHHHHHHCCCCCCEEECHHHCCC
VAIIRATTADERGNLTYEHEGAYLGGLDQALAVRNNGGIVIAQVKRITKEGSLKPHDVRV
EEEEEEECCCCCCCEEEEECCCEECCCCCEEEEECCCCEEEEEEHHHHHCCCCCCCCEEC
PGMLVDYIVVDPDQKQTTQTAYDPAISGEIFRPLDSFHVPEFNVQKVIARRVAQELQAGS
CCEEEEEEEECCCCCHHHHHHCCCCCCCHHHCCHHHCCCCCCCHHHHHHHHHHHHHCCCC
CVNLGFGISANVPRILLEEGLHGAVTWVIEQGAVGGVPLLDFAFGCASNADAYMPSPYQF
EEEECCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCEEE
TYFQGAGFDASLLSFLEIGKDGSVNVSKLSFRPHVTAGAGGFVDITARAKKIVFSGMFNA
EEEECCCCCHHHHHHHHCCCCCCCEEEEEEECCCEECCCCCEEEEEHHHHHHHEEHHCCC
GAKLSIADGALLIEKEGKLKKLVNEVEHVTFSGRRAIEQGQDIIYVTERCVMKLTPEGIV
CCEEEEECCEEEEECCCHHHHHHHHHHHEECCCHHHHHCCCCEEEEECEEHEEECCCCEE
LTEIAPGVDLQSQILDQSEFPLIVAPDLKVMDAALFGEAGIGLSLPAKSARTLEGTFHG
EEECCCCCCHHHHHCCCCCCCEEECCCCHHHHHHHHCCCCCCEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MHMKKHLTPAEAAALIPDGVVVTVSSSSGLGCPDLMLKAIGERFEATGHPRDLTTLHPIA
CCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCCC
AGDMSGIKGVDYIARKGLLKCIIGGSYPSGPSSSEPPLIWQMITNNEIPAYNIPSGILFD
CCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCCEEE
IHREAAAKRPGVLTKVGVDTFVDPRRQGCAMNELASEQQVVKRVSFEGDDWLFFPSIVPQ
EHHHHHHCCCCCEEECCCHHHCCCHHCCCCHHHHHHHHHHHHHHCCCCCCEEECHHHCCC
VAIIRATTADERGNLTYEHEGAYLGGLDQALAVRNNGGIVIAQVKRITKEGSLKPHDVRV
EEEEEEECCCCCCCEEEEECCCEECCCCCEEEEECCCCEEEEEEHHHHHCCCCCCCCEEC
PGMLVDYIVVDPDQKQTTQTAYDPAISGEIFRPLDSFHVPEFNVQKVIARRVAQELQAGS
CCEEEEEEEECCCCCHHHHHHCCCCCCCHHHCCHHHCCCCCCCHHHHHHHHHHHHHCCCC
CVNLGFGISANVPRILLEEGLHGAVTWVIEQGAVGGVPLLDFAFGCASNADAYMPSPYQF
EEEECCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCEEE
TYFQGAGFDASLLSFLEIGKDGSVNVSKLSFRPHVTAGAGGFVDITARAKKIVFSGMFNA
EEEECCCCCHHHHHHHHCCCCCCCEEEEEEECCCEECCCCCEEEEEHHHHHHHEEHHCCC
GAKLSIADGALLIEKEGKLKKLVNEVEHVTFSGRRAIEQGQDIIYVTERCVMKLTPEGIV
CCEEEEECCEEEEECCCHHHHHHHHHHHEECCCHHHHHCCCCEEEEECEEHEEECCCCEE
LTEIAPGVDLQSQILDQSEFPLIVAPDLKVMDAALFGEAGIGLSLPAKSARTLEGTFHG
EEECCCCCCHHHHHCCCCCCCEEECCCCHHHHHHHHCCCCCCEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 3541912; 7984428 [H]