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The map label for this gene is sdpR [H]

Identifier: 209547682

GI number: 209547682

Start: 70457

End: 70822

Strand: Direct

Name: sdpR [H]

Synonym: Rleg2_0070

Alternate gene names: 209547682

Gene position: 70457-70822 (Clockwise)

Preceding gene: 209547679

Following gene: 209547684

Centisome position: 1.55

GC content: 59.02

Gene sequence:

>366_bases
TTGGAAGATGAGACTTTCGACGATATTTCAGAAGGCAGCTCTGTCGGCGCCGCCCAGCGGGTGTTCCACGCGCTTTCCAG
TGCGCCGCGGCGGAAGATCCTTGCCTATCTCTCGGCATCCGGCCTGACCGCCGGCGAGATTGCTGACCGCTTCAGCATGT
CCAAACCGGCGGTTTCCCAGCATCTTTCCATCCTCGAAACGGCCGGACTGATTAAACGGGAGAAACAGGGCCAGTTCGTC
CACTATTCCCTCATCGAGAACAATCTCGTCAATACGCTCAACGGCTTCGTCCAGGAGGTCTGCCCGGTCGGCCGGCCGAT
CAAGAAGGAAAGCCAGGCGCGCATCCGCGCCAAAGAATTGCCTTGA

Upstream 100 bases:

>100_bases
CTAATTACTTTGCGCCAATGAGAACGATTAAGCAATACATTAATTGCTTAATTGATCGGCGGAATCGACGCGATGATTGC
CGCAGGCACGGAGACCGGCT

Downstream 100 bases:

>100_bases
GCATCGGGGCCGATCCCGTGCTGGCGTGATCGCGAGGAACATGGAAGAGGTCGGGCAGGCGCCTCTGACGCACGGGCGCT
ACTGGCTGCTCTTCCCGATG

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MEDETFDDISEGSSVGAAQRVFHALSSAPRRKILAYLSASGLTAGEIADRFSMSKPAVSQHLSILETAGLIKREKQGQFV
HYSLIENNLVNTLNGFVQEVCPVGRPIKKESQARIRAKELP

Sequences:

>Translated_121_residues
MEDETFDDISEGSSVGAAQRVFHALSSAPRRKILAYLSASGLTAGEIADRFSMSKPAVSQHLSILETAGLIKREKQGQFV
HYSLIENNLVNTLNGFVQEVCPVGRPIKKESQARIRAKELP
>Mature_121_residues
MEDETFDDISEGSSVGAAQRVFHALSSAPRRKILAYLSASGLTAGEIADRFSMSKPAVSQHLSILETAGLIKREKQGQFV
HYSLIENNLVNTLNGFVQEVCPVGRPIKKESQARIRAKELP

Specific function: Represses the transcription of the sdpIR operon and of several other operons that probably contribute to delaying commitment to sporulation [H]

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 13255; Mature: 13255

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDETFDDISEGSSVGAAQRVFHALSSAPRRKILAYLSASGLTAGEIADRFSMSKPAVSQ
CCCCCCHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHH
HLSILETAGLIKREKQGQFVHYSLIENNLVNTLNGFVQEVCPVGRPIKKESQARIRAKEL
HHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
P
C
>Mature Secondary Structure
MEDETFDDISEGSSVGAAQRVFHALSSAPRRKILAYLSASGLTAGEIADRFSMSKPAVSQ
CCCCCCHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHH
HLSILETAGLIKREKQGQFVHYSLIENNLVNTLNGFVQEVCPVGRPIKKESQARIRAKEL
HHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]