| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is ydjI [H]
Identifier: 209396071
GI number: 209396071
Start: 2364829
End: 2365665
Strand: Reverse
Name: ydjI [H]
Synonym: ECH74115_2497
Alternate gene names: 209396071
Gene position: 2365665-2364829 (Counterclockwise)
Preceding gene: 209398191
Following gene: 209396793
Centisome position: 42.46
GC content: 45.64
Gene sequence:
>837_bases ATGCTCGCAGATATCAGATATTGGGAAAACGATGCCACAAATAAACGTTATGCTATTGCCCATTTTAATGTATGGAATGC AGAAATGTTGATGGGCGTTATCGACGCAGCCGAAGAAGCGAAATCACCGGTTATTATTTCTTTTGGCACAGGTTTTGTCG GCAACACCTCATTTGAAGATTTCTCTCACATGATGGTATCTATGGCACAAAAAGCAACGGTGCCGGTAATAACTCATTGG GATCATGGTCGGAGTATGGAGATTATTCATAACGCCTGGACTCATGGTATGAATTCATTAATGCGTGATGCTTCCGCATT TGATTTCGAAGAAAATATTCGTTTAACCAAAGAGGCTGTTGATTTCTTCCATCCGCTGGGTATTCCGGTAGAGGCGGAAT TAGGGCATGTCGGTAATGAAACCGTTTATGAGGAAGCGCTGGCGGGCTATCACTATACCGATCCTGACCAGGCGGCTGAA TTTGTTGAACGTACGGGCTGTGACTCATTGGCTGTCGCCATCGGCAACCAGCATGGGGTTTATACGTCAGAGCCACAATT GAACTTTGAGGTCGTCAAACGCGTACGCGATGCAGTGTCTGTTCCGCTGGTTTTGCATGGCGCATCGGGGATCAGTGATG CCGACATTAAAACTGCAATTTCGTTGGGTATCGCGAAAATCAACATCCATACGGAGCTCTGTCAGGCCGCAATGGTCGCA GTGAAAGAAAACCAGGATCAGCCTTTCCTGCATTTAGAACGTGAAGTACGTAAAGCTGTAAAAGAACGGGCATTGGAAAA AATTAAACTGTTCGGTTCTGATGGCAAAGCGGAATAA
Upstream 100 bases:
>100_bases GGGATGTACAACAGGCATTTGAAGAGTCAGTTAACAACAAACGCGACATTATTAAAGGCGTTATTAAGATTAGCGATTAA TTAATACGGGAGAACAGAAC
Downstream 100 bases:
>100_bases TGATATGGATAATCTCGACGTTATTTGTATAGGTGCCGCTATTGTTGATATTCCATTGCAACCGGTCAGTAAAAATATCT TTGATGTGGATTCTTATCCT
Product: fructose-bisphosphate aldolase, class II family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MLADIRYWENDATNKRYAIAHFNVWNAEMLMGVIDAAEEAKSPVIISFGTGFVGNTSFEDFSHMMVSMAQKATVPVITHW DHGRSMEIIHNAWTHGMNSLMRDASAFDFEENIRLTKEAVDFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAE FVERTGCDSLAVAIGNQHGVYTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKTAISLGIAKINIHTELCQAAMVA VKENQDQPFLHLEREVRKAVKERALEKIKLFGSDGKAE
Sequences:
>Translated_278_residues MLADIRYWENDATNKRYAIAHFNVWNAEMLMGVIDAAEEAKSPVIISFGTGFVGNTSFEDFSHMMVSMAQKATVPVITHW DHGRSMEIIHNAWTHGMNSLMRDASAFDFEENIRLTKEAVDFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAE FVERTGCDSLAVAIGNQHGVYTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKTAISLGIAKINIHTELCQAAMVA VKENQDQPFLHLEREVRKAVKERALEKIKLFGSDGKAE >Mature_278_residues MLADIRYWENDATNKRYAIAHFNVWNAEMLMGVIDAAEEAKSPVIISFGTGFVGNTSFEDFSHMMVSMAQKATVPVITHW DHGRSMEIIHNAWTHGMNSLMRDASAFDFEENIRLTKEAVDFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAE FVERTGCDSLAVAIGNQHGVYTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKTAISLGIAKINIHTELCQAAMVA VKENQDQPFLHLEREVRKAVKERALEKIKLFGSDGKAE
Specific function: Unknown
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788072, Length=278, Percent_Identity=99.6402877697842, Blast_Score=575, Evalue=1e-165, Organism=Escherichia coli, GI1789526, Length=276, Percent_Identity=37.3188405797101, Blast_Score=172, Evalue=2e-44, Organism=Escherichia coli, GI87082041, Length=234, Percent_Identity=42.3076923076923, Blast_Score=171, Evalue=6e-44, Organism=Escherichia coli, GI1789293, Length=273, Percent_Identity=24.5421245421245, Blast_Score=68, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6322790, Length=284, Percent_Identity=25.7042253521127, Blast_Score=65, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: NA
Molecular weight: Translated: 30829; Mature: 30829
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLADIRYWENDATNKRYAIAHFNVWNAEMLMGVIDAAEEAKSPVIISFGTGFVGNTSFED CCCCCEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHH FSHMMVSMAQKATVPVITHWDHGRSMEIIHNAWTHGMNSLMRDASAFDFEENIRLTKEAV HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH DFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAEFVERTGCDSLAVAIGNQHGV HHHHCCCCCEEHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCE YTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKTAISLGIAKINIHTELCQAAMVA ECCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCEEEEEHHHHHHHHHHHH VKENQDQPFLHLEREVRKAVKERALEKIKLFGSDGKAE HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLADIRYWENDATNKRYAIAHFNVWNAEMLMGVIDAAEEAKSPVIISFGTGFVGNTSFED CCCCCEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHH FSHMMVSMAQKATVPVITHWDHGRSMEIIHNAWTHGMNSLMRDASAFDFEENIRLTKEAV HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH DFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAEFVERTGCDSLAVAIGNQHGV HHHHCCCCCEEHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCE YTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKTAISLGIAKINIHTELCQAAMVA ECCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCEEEEEHHHHHHHHHHHH VKENQDQPFLHLEREVRKAVKERALEKIKLFGSDGKAE HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]