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The map label for this gene is ydjH [H]

Identifier: 209396793

GI number: 209396793

Start: 2363892

End: 2364824

Strand: Reverse

Name: ydjH [H]

Synonym: ECH74115_2496

Alternate gene names: 209396793

Gene position: 2364824-2363892 (Counterclockwise)

Preceding gene: 209396071

Following gene: 209399877

Centisome position: 42.44

GC content: 45.44

Gene sequence:

>933_bases
ATGGATAATCTCGACGTTATTTGTATAGGTGCCGCTATTGTTGATATTCCATTGCAACCGGTCAGTAAAAATATCTTTGA
TGTGGATTCTTATCCTCTTGAAAGAATCGCAATGACCACCGGGGGTGATGCAATAAATGAAGCAACAATTATTTCTCGTC
TGGGCCATCGTACAGCATTAATGAGCCGTATTGGTAAAGATGCCGCAGGGCAGTTTATTCTCGACCATTGCCGCAAAGAG
AATATTGATATTCAAAGCCTGAAGCAGGACGTCAACATAGATACCTCTATTAATGTTGGACTGGTGACGGAGGATGGCGA
GCGGACGTTTGTCACAAACCGTAACGGCAGTCTGTGGAAATTGAATATTGACGATGTTGATTTTGCGCGGTTTTCCCAGG
CGAAATTATTATCACTGGCCAGTATTTTCAACAGTCCACTATTGGATGGTAAAGCGCTAACAGAAATTTTTACGCAAGCT
AAAGCCCGGCAGATGAATATCTGTGCCGATATGATTAAACCGCGGTTGAATGAAACGCTGGATGATATTTGCGAAGCATT
GAGTTATGTCAATTATGCCGAGGCAAAATTACTCACCGGGAAAGAGACACTGGATGAAATTGCTGACAGCTTTCTTGCGT
GCGGCGTAAAAACGGTGGTGATTAAAACGGGTAAAGACGGCTGCTTTATCAAGCGTGGTGACATGACGATGAAGGTGCCG
GCGGTCGCAGGAATAACCGCCATCGACACCATTGGCGCGGGCGATAACTTTGCTTCAGGTTTTATTGCGGCACTGTTAGA
AGGAAAAAATCTGCGTGAATGCGCACGCTTTGCCAATGCAACGGCGGCTATCTCGGTTCTAAGCGTCGGTGCCACCACCG
GCGTAAAAAACAGAAAGCTGGTCGAACAATTGCTGGAAGAATACGAAGGATAA

Upstream 100 bases:

>100_bases
CCTTTCCTGCATTTAGAACGTGAAGTACGTAAAGCTGTAAAAGAACGGGCATTGGAAAAAATTAAACTGTTCGGTTCTGA
TGGCAAAGCGGAATAATGAT

Downstream 100 bases:

>100_bases
TGAAGGCAAATGAAAAAGATACCTTTAGGCACAACGGATATTACGCTTTCGCGAATGGGGTTGGGGACATGGGCCATTGG
CGGCGGTCCTGCATGGAATG

Product: kinase, pfkB family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKE
NIDIQSLKQDVNIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQA
KARQMNICADMIKPRLNETLDDICEALSYVNYAEAKLLTGKETLDEIADSFLACGVKTVVIKTGKDGCFIKRGDMTMKVP
AVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG

Sequences:

>Translated_310_residues
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKE
NIDIQSLKQDVNIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQA
KARQMNICADMIKPRLNETLDDICEALSYVNYAEAKLLTGKETLDEIADSFLACGVKTVVIKTGKDGCFIKRGDMTMKVP
AVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG
>Mature_310_residues
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKE
NIDIQSLKQDVNIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQA
KARQMNICADMIKPRLNETLDDICEALSYVNYAEAKLLTGKETLDEIADSFLACGVKTVVIKTGKDGCFIKRGDMTMKVP
AVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87081971, Length=315, Percent_Identity=97.1428571428571, Blast_Score=613, Evalue=1e-177,
Organism=Escherichia coli, GI87082281, Length=275, Percent_Identity=25.4545454545455, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1789775, Length=264, Percent_Identity=24.6212121212121, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790193, Length=298, Percent_Identity=28.1879194630872, Blast_Score=64, Evalue=9e-12,
Organism=Drosophila melanogaster, GI20128807, Length=304, Percent_Identity=25.9868421052632, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 33514; Mature: 33514

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTAL
CCCCCEEEEEEEEEECCCCHHCCCCCCCCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHH
MSRIGKDAAGQFILDHCRKENIDIQSLKQDVNIDTSINVGLVTEDGERTFVTNRNGSLWK
HHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEECCCEEEEECCCCCEEE
LNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMNICADMIKPRLNETL
EECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDICEALSYVNYAEAKLLTGKETLDEIADSFLACGVKTVVIKTGKDGCFIKRGDMTMKVP
HHHHHHHHHCCHHHHHEECCHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEECCCEEECC
AVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKL
CHHCCHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCHHHH
VEQLLEEYEG
HHHHHHHHCC
>Mature Secondary Structure
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTAL
CCCCCEEEEEEEEEECCCCHHCCCCCCCCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHH
MSRIGKDAAGQFILDHCRKENIDIQSLKQDVNIDTSINVGLVTEDGERTFVTNRNGSLWK
HHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEECCCEEEEECCCCCEEE
LNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMNICADMIKPRLNETL
EECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDICEALSYVNYAEAKLLTGKETLDEIADSFLACGVKTVVIKTGKDGCFIKRGDMTMKVP
HHHHHHHHHCCHHHHHEECCHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEECCCEEECC
AVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKL
CHHCCHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCHHHH
VEQLLEEYEG
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]