Click here to switch to the map view.

The map label for this gene is yjbE

Identifier: 209396054

GI number: 209396054

Start: 5153534

End: 5153776

Strand: Direct

Name: yjbE

Synonym: ECH74115_5505

Alternate gene names: 209396054

Gene position: 5153534-5153776 (Clockwise)

Preceding gene: 209399227

Following gene: 209400745

Centisome position: 92.49

GC content: 60.91

Gene sequence:

>243_bases
ATGAAAAAAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGG
CGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCTCGGCGG
TGGGTGTCGCGCTCGCGGCAACCGGTGGCGGTGATGGTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAG
TAA

Upstream 100 bases:

>100_bases
ATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCA
TTCAATGAAGGGAAATTGTT

Downstream 100 bases:

>100_bases
TAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTTACCATAACCACACTCC
GGTGTGGTTATTCTGCCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MKKVLYGIFAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSATSVSTVSSAVGVALAATGGGDGSNTGTTTTTTTSTQ

Sequences:

>Translated_80_residues
MKKVLYGIFAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSATSVSTVSSAVGVALAATGGGDGSNTGTTTTTTTSTQ
>Mature_80_residues
MKKVLYGIFAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSATSVSTVSSAVGVALAATGGGDGSNTGTTTTTTTSTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790458, Length=80, Percent_Identity=100, Blast_Score=142, Evalue=6e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJBE_ECO57 (P0AF47)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   A91255
- PIR:   E86095
- RefSeq:   NP_290660.1
- RefSeq:   NP_313036.1
- EnsemblBacteria:   EBESCT00000027899
- EnsemblBacteria:   EBESCT00000057704
- GeneID:   914327
- GeneID:   960097
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z5624
- KEGG:   ecs:ECs5009
- GeneTree:   EBGT00050000012065
- HOGENOM:   HBG086471
- ProtClustDB:   CLSK880829
- BioCyc:   ECOL83334:ECS5009-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7386; Mature: 7386

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLYGIFAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSATSVSTVSSAVGVALAA
CCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEE
TGGGDGSNTGTTTTTTTSTQ
CCCCCCCCCCCCEEEECCCC
>Mature Secondary Structure
MKKVLYGIFAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSATSVSTVSSAVGVALAA
CCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEE
TGGGDGSNTGTTTTTTTSTQ
CCCCCCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796