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The map label for this gene is yjbF [H]

Identifier: 209400745

GI number: 209400745

Start: 5153890

End: 5154528

Strand: Direct

Name: yjbF [H]

Synonym: ECH74115_5506

Alternate gene names: 209400745

Gene position: 5153890-5154528 (Clockwise)

Preceding gene: 209396054

Following gene: 209397471

Centisome position: 92.49

GC content: 54.93

Gene sequence:

>639_bases
GTGAAGCGACCTGCATTCATTCTTATCTGCCTGCTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACT
GTGGGACAGTCTGTTCGGCACGCCAGGCGTACAGCTGACGGACGATGATATTCAAAATATGCCCTACGCCAGCCAGTACA
TGCAGCTTAATGGTGGGCCGCAGTTGTTTGTGGTGCTGGCCTTCGCTGAAGACGGACAACAAAAATGGGTCACTCAGGAT
CAGGCCACTCTCGTCACACAACATGGTCGTCTGGTGAAGACTTTGCTTGGCGGCGACAACCTGATTGAAGTGAATAACCT
TGCCGCCGACCCGCTGATTAAACCCGCACAAATCATTGATGGCGCAACCTGGATGCGCACGATGGGCTGGACCGAGTACC
AGCAGGTACGCTACGCCACCGCACGCTCAGTCTTCAAATGGGATGGCACCGGTACCGTTAAGGTCGGCAGCGATGAAACC
GCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGGAGGGCA
AATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTCCCGGTGAAAACCACTCTCATCAAGGCGGCAAAACAATGA

Upstream 100 bases:

>100_bases
CCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTTACCATAACCACACTCCGGTGTGGTTATTC
TGCCCCTCTGGAGAAGAGTC

Downstream 100 bases:

>100_bases
TTAAACAAACTATTGTCGCGTTGCTTTTGAGTGTGGGAGCGTCATCGGTCTTCGCGGCAGGAACCGTCAAGGTGTTCAGC
AATGGCAGCAGTGAGGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKRPAFILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGPQLFVVLAFAEDGQQKWVTQD
QATLVTQHGRLVKTLLGGDNLIEVNNLAADPLIKPAQIIDGATWMRTMGWTEYQQVRYATARSVFKWDGTGTVKVGSDET
AVRVLDEEVSTDQARWHNRYWIDSGGQIRQSEQYLGADYFPVKTTLIKAAKQ

Sequences:

>Translated_212_residues
MKRPAFILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGPQLFVVLAFAEDGQQKWVTQD
QATLVTQHGRLVKTLLGGDNLIEVNNLAADPLIKPAQIIDGATWMRTMGWTEYQQVRYATARSVFKWDGTGTVKVGSDET
AVRVLDEEVSTDQARWHNRYWIDSGGQIRQSEQYLGADYFPVKTTLIKAAKQ
>Mature_212_residues
MKRPAFILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGPQLFVVLAFAEDGQQKWVTQD
QATLVTQHGRLVKTLLGGDNLIEVNNLAADPLIKPAQIIDGATWMRTMGWTEYQQVRYATARSVFKWDGTGTVKVGSDET
AVRVLDEEVSTDQARWHNRYWIDSGGQIRQSEQYLGADYFPVKTTLIKAAKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ymcC [H]

Homologues:

Organism=Escherichia coli, GI87082360, Length=212, Percent_Identity=96.6981132075472, Blast_Score=424, Evalue=1e-120,
Organism=Escherichia coli, GI1787221, Length=212, Percent_Identity=38.2075471698113, Blast_Score=157, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021308 [H]

Pfam domain/function: PF11102 DUF2886 [H]

EC number: NA

Molecular weight: Translated: 23691; Mature: 23691

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRPAFILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGP
CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEECCCHHHCCCCHHHHEEECCCC
QLFVVLAFAEDGQQKWVTQDQATLVTQHGRLVKTLLGGDNLIEVNNLAADPLIKPAQIID
EEEEEEEECCCCCHHHCCCCHHHHHHHCCHHHHHHHCCCCEEEECCCCCCCCCCHHHHHC
GATWMRTMGWTEYQQVRYATARSVFKWDGTGTVKVGSDETAVRVLDEEVSTDQARWHNRY
CHHHHHHCCCHHHHHHHHHHHHHEEEECCCEEEEECCCCHHHHHHHHHHCCHHHHHCCEE
WIDSGGQIRQSEQYLGADYFPVKTTLIKAAKQ
EECCCCCEECCHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKRPAFILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGP
CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEECCCHHHCCCCHHHHEEECCCC
QLFVVLAFAEDGQQKWVTQDQATLVTQHGRLVKTLLGGDNLIEVNNLAADPLIKPAQIID
EEEEEEEECCCCCHHHCCCCHHHHHHHCCHHHHHHHCCCCEEEECCCCCCCCCCHHHHHC
GATWMRTMGWTEYQQVRYATARSVFKWDGTGTVKVGSDETAVRVLDEEVSTDQARWHNRY
CHHHHHHCCCHHHHHHHHHHHHHEEEECCCEEEEECCCCHHHHHHHHHHCCHHHHHCCEE
WIDSGGQIRQSEQYLGADYFPVKTTLIKAAKQ
EECCCCCEECCHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]