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The map label for this gene is ycbT [H]

Identifier: 209395769

GI number: 209395769

Start: 4802650

End: 4803720

Strand: Reverse

Name: ycbT [H]

Synonym: ECH74115_5160

Alternate gene names: 209395769

Gene position: 4803720-4802650 (Counterclockwise)

Preceding gene: 209397496

Following gene: 209398343

Centisome position: 86.21

GC content: 47.43

Gene sequence:

>1071_bases
ATGAAAAAAATATTATCAGGGTTGATTCTGCTGCTTTGCTGTCCTTATGGTTTCGCCGCTAATGGTGATGGCGCAACGCA
CATGTCAAATTTATCATTTGGTCCGCTGACGGTGGCAGCGGCGAATAACCACTCCGGATACAATATTTTCGAGGCACTGA
GCAACACGACTGGAACATACCCGGTGCGCTGTCACTGTGATGACACGCATGGCGGACCGGGCCAACAAACAGCATTTTTT
CCTATCTTCTACACGGGAGATGCCGCACCGGGGCTTGTGCTTGAGCGCACTCTTAATGGGTTAAATTACTATGCTCTGAA
TGATTATTTATCGGTCGGCGTGACGATTTTTATTATTAATAACCAATATGCGGCCATTCCTTTTGAACACTTATCCAACC
AATCCACCTCACCGCAACATACCTGTGGAGCAGGTAATAATGGGAGCACTGTAAATCTGGATTCAGGGCGCTCGGCAAAA
TTATCTTTCTATGTTCGGCATTCTATTACTGGCACGGTGACAATACCCACAACGGAAGTCGCCTGGTTGTACGCGGGCAT
GTCCGATCATTTTCCCAAAACGACCCCCGTTTCTAAAGTGACAATTCGCGGACAACTAACGGCCCCGCAGAACTGTGAGT
TAACGCCAAATCAGAGCATCGATGTCGATTTTCAAAAAATTAATAGCGCTGAGTTCTCCTCAACGGCGGGTTCAATTATT
GCAGAAAGAAAGATTAAAACCGAAGTCACAGTATCCTGTACCGGGATGGAAGACGTAAGGTCCACGGAGGTGGTGAGTGC
GTCGATGATTGCGGCAAACAGAAGTGCCGATGCCACCATGATCGTGACGAGTAATCCGGATGTGGGAATTAAGATTTTTG
ATAAGAACGACCGTCCAGTGAATGTGGATGGGGGCAACTTACCCGCTGATATGGGTGCTATTAGTCGATTAGGAAAAACC
GATGGTAGCGTAACGTTTTATTCAGCGCCCGCCAGTCTGACGGGCGCAAAACCAGCGCCTGATAATGGATTTACCGCTAC
AGCCACGCTGGTTATTGAATTTACTAACTAA

Upstream 100 bases:

>100_bases
CTGCGGATGAAAAATGTAAGGCGGCCTATCACATCACCCATAAACCTGATGATACCAGCCTGGTTCAAATGGATGCGATT
TGTCGCTAAAGGAAGCATGA

Downstream 100 bases:

>100_bases
TCTTGTGTTAGTAAAAGGAATAATTTCATGAAAAAATGGCATTATATATTTTGCATAATTCTCTTTCATTTAGGGTTACC
GTGCGGGTATGCGGCAAATG

Product: putative fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MKKILSGLILLLCCPYGFAANGDGATHMSNLSFGPLTVAAANNHSGYNIFEALSNTTGTYPVRCHCDDTHGGPGQQTAFF
PIFYTGDAAPGLVLERTLNGLNYYALNDYLSVGVTIFIINNQYAAIPFEHLSNQSTSPQHTCGAGNNGSTVNLDSGRSAK
LSFYVRHSITGTVTIPTTEVAWLYAGMSDHFPKTTPVSKVTIRGQLTAPQNCELTPNQSIDVDFQKINSAEFSSTAGSII
AERKIKTEVTVSCTGMEDVRSTEVVSASMIAANRSADATMIVTSNPDVGIKIFDKNDRPVNVDGGNLPADMGAISRLGKT
DGSVTFYSAPASLTGAKPAPDNGFTATATLVIEFTN

Sequences:

>Translated_356_residues
MKKILSGLILLLCCPYGFAANGDGATHMSNLSFGPLTVAAANNHSGYNIFEALSNTTGTYPVRCHCDDTHGGPGQQTAFF
PIFYTGDAAPGLVLERTLNGLNYYALNDYLSVGVTIFIINNQYAAIPFEHLSNQSTSPQHTCGAGNNGSTVNLDSGRSAK
LSFYVRHSITGTVTIPTTEVAWLYAGMSDHFPKTTPVSKVTIRGQLTAPQNCELTPNQSIDVDFQKINSAEFSSTAGSII
AERKIKTEVTVSCTGMEDVRSTEVVSASMIAANRSADATMIVTSNPDVGIKIFDKNDRPVNVDGGNLPADMGAISRLGKT
DGSVTFYSAPASLTGAKPAPDNGFTATATLVIEFTN
>Mature_356_residues
MKKILSGLILLLCCPYGFAANGDGATHMSNLSFGPLTVAAANNHSGYNIFEALSNTTGTYPVRCHCDDTHGGPGQQTAFF
PIFYTGDAAPGLVLERTLNGLNYYALNDYLSVGVTIFIINNQYAAIPFEHLSNQSTSPQHTCGAGNNGSTVNLDSGRSAK
LSFYVRHSITGTVTIPTTEVAWLYAGMSDHFPKTTPVSKVTIRGQLTAPQNCELTPNQSIDVDFQKINSAEFSSTAGSII
AERKIKTEVTVSCTGMEDVRSTEVVSASMIAANRSADATMIVTSNPDVGIKIFDKNDRPVNVDGGNLPADMGAISRLGKT
DGSVTFYSAPASLTGAKPAPDNGFTATATLVIEFTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1787173, Length=372, Percent_Identity=25.8064516129032, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI145693100, Length=275, Percent_Identity=24, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789534, Length=389, Percent_Identity=25.1928020565553, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37646; Mature: 37646

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILSGLILLLCCPYGFAANGDGATHMSNLSFGPLTVAAANNHSGYNIFEALSNTTGTY
CHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCHHHHHHHCCCCCC
PVRCHCDDTHGGPGQQTAFFPIFYTGDAAPGLVLERTLNGLNYYALNDYLSVGVTIFIIN
EEEEEECCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHCCCEEEEECCEEECCEEEEEEC
NQYAAIPFEHLSNQSTSPQHTCGAGNNGSTVNLDSGRSAKLSFYVRHSITGTVTIPTTEV
CCEEEEEHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEECCEEEEEECCCEE
AWLYAGMSDHFPKTTPVSKVTIRGQLTAPQNCELTPNQSIDVDFQKINSAEFSSTAGSII
EEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEHHHCCCCCCCCCCCCEE
AERKIKTEVTVSCTGMEDVRSTEVVSASMIAANRSADATMIVTSNPDVGIKIFDKNDRPV
EEEEECEEEEEEECCCHHCCCHHHEEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEE
NVDGGNLPADMGAISRLGKTDGSVTFYSAPASLTGAKPAPDNGFTATATLVIEFTN
EECCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MKKILSGLILLLCCPYGFAANGDGATHMSNLSFGPLTVAAANNHSGYNIFEALSNTTGTY
CHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCHHHHHHHCCCCCC
PVRCHCDDTHGGPGQQTAFFPIFYTGDAAPGLVLERTLNGLNYYALNDYLSVGVTIFIIN
EEEEEECCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHCCCEEEEECCEEECCEEEEEEC
NQYAAIPFEHLSNQSTSPQHTCGAGNNGSTVNLDSGRSAKLSFYVRHSITGTVTIPTTEV
CCEEEEEHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEECCEEEEEECCCEE
AWLYAGMSDHFPKTTPVSKVTIRGQLTAPQNCELTPNQSIDVDFQKINSAEFSSTAGSII
EEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEHHHCCCCCCCCCCCCEE
AERKIKTEVTVSCTGMEDVRSTEVVSASMIAANRSADATMIVTSNPDVGIKIFDKNDRPV
EEEEECEEEEEEECCCHHCCCHHHEEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEE
NVDGGNLPADMGAISRLGKTDGSVTFYSAPASLTGAKPAPDNGFTATATLVIEFTN
EECCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]