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The map label for this gene is ycbT [H]

Identifier: 209398343

GI number: 209398343

Start: 4801540

End: 4802622

Strand: Reverse

Name: ycbT [H]

Synonym: ECH74115_5159

Alternate gene names: 209398343

Gene position: 4802622-4801540 (Counterclockwise)

Preceding gene: 209395769

Following gene: 209400241

Centisome position: 86.19

GC content: 43.77

Gene sequence:

>1083_bases
ATGAAAAAATGGCATTATATATTTTGCATAATTCTCTTTCATTTAGGGTTACCGTGCGGGTATGCGGCAAATGATGGCAC
GTGTGCAACAAGAGGCGGCACACATACATTAAGCCTTAATTTTCCTCTGACAACGGTCAGTGCAGCAAACAATGTGCCTG
GAAATACATTAATAGATATTGCTAATGCAACATCTTCTGAAAATTATAGCGTTCTGTGTAACTGTGATTCAAAACATAGC
AATGGCGCTTATCACGAAATATATTATACCGCAGACCCTGCTCCCGGTATGGTTTATAGCACCACCGCAAGTGGTCTTGC
TTTTTACTATCTTAACGAATATGTCGATGTGGGAACAAAAATATCTGTGCTAAATGCGGGGTATACGGCAGTTCCTTTTG
AACATGTTTCCAACCAGGCAACTACAACAGATCACACTTGTCAGGGAAACAAAACTACAGCGGTTGGCGTGAGCCTGAAA
ACTGGAGCAGATGCGAAGATTTCATTTCGTATTAAACGTTCAATAAATGGAACGGTAGTAATACCTATCACCGATATTGC
ATTGCTGTATGCCAACATATCCAGCACCACGACCCGTGGTGAGGCGATTGCAAAAGTTCGAATTTCAGGCAGTTTGACCG
CACCACAGTCTTGTCAGATAAATGCAGGACAGGTGATTTATTTTGATTTTGATACTATTCCTGCGTCCGAATTTTCATCT
ACCGCCGGGCAAGCCATTACTTCACGAAAAATCACTAAAACAGTGAGTATTGAGTGTACGGGGATGGGGTATGAGCGTAC
GCAGAAAGTCGATGCTTCTTTTACGGGGACGAACCGAAGCAGTGACGATACGATGGTGGCGACAGACAATGCTGATGTCG
GGATCAAAATTTACAATAAATCGAATGCTGAAGTTAGCGTCAACAACGGCAAGTTACCCGCAGACATGGGCAACACGACC
ATTTTTGGTCGTAAAAATGGTTCGGTAACTTTTTCGGCAGCACCTGCCAGCTTTACCGGTGCCCGGCCTCAGCCCGGCGT
TTTTAACGCTACCGCGACCTTAACCATTGAATTTGTAAACTAA

Upstream 100 bases:

>100_bases
GACGGGCGCAAAACCAGCGCCTGATAATGGATTTACCGCTACAGCCACGCTGGTTATTGAATTTACTAACTAATCTTGTG
TTAGTAAAAGGAATAATTTC

Downstream 100 bases:

>100_bases
CCTTTTGCGGCTGTTTTATGACAGCCGTTCATATTTCCTCTCCTTTCATGAAAAAATGCTGATATTTTTCCCCTTCAATA
TCAATAAGTAATAACTTTCC

Product: fimbrial family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKKWHYIFCIILFHLGLPCGYAANDGTCATRGGTHTLSLNFPLTTVSAANNVPGNTLIDIANATSSENYSVLCNCDSKHS
NGAYHEIYYTADPAPGMVYSTTASGLAFYYLNEYVDVGTKISVLNAGYTAVPFEHVSNQATTTDHTCQGNKTTAVGVSLK
TGADAKISFRIKRSINGTVVIPITDIALLYANISSTTTRGEAIAKVRISGSLTAPQSCQINAGQVIYFDFDTIPASEFSS
TAGQAITSRKITKTVSIECTGMGYERTQKVDASFTGTNRSSDDTMVATDNADVGIKIYNKSNAEVSVNNGKLPADMGNTT
IFGRKNGSVTFSAAPASFTGARPQPGVFNATATLTIEFVN

Sequences:

>Translated_360_residues
MKKWHYIFCIILFHLGLPCGYAANDGTCATRGGTHTLSLNFPLTTVSAANNVPGNTLIDIANATSSENYSVLCNCDSKHS
NGAYHEIYYTADPAPGMVYSTTASGLAFYYLNEYVDVGTKISVLNAGYTAVPFEHVSNQATTTDHTCQGNKTTAVGVSLK
TGADAKISFRIKRSINGTVVIPITDIALLYANISSTTTRGEAIAKVRISGSLTAPQSCQINAGQVIYFDFDTIPASEFSS
TAGQAITSRKITKTVSIECTGMGYERTQKVDASFTGTNRSSDDTMVATDNADVGIKIYNKSNAEVSVNNGKLPADMGNTT
IFGRKNGSVTFSAAPASFTGARPQPGVFNATATLTIEFVN
>Mature_360_residues
MKKWHYIFCIILFHLGLPCGYAANDGTCATRGGTHTLSLNFPLTTVSAANNVPGNTLIDIANATSSENYSVLCNCDSKHS
NGAYHEIYYTADPAPGMVYSTTASGLAFYYLNEYVDVGTKISVLNAGYTAVPFEHVSNQATTTDHTCQGNKTTAVGVSLK
TGADAKISFRIKRSINGTVVIPITDIALLYANISSTTTRGEAIAKVRISGSLTAPQSCQINAGQVIYFDFDTIPASEFSS
TAGQAITSRKITKTVSIECTGMGYERTQKVDASFTGTNRSSDDTMVATDNADVGIKIYNKSNAEVSVNNGKLPADMGNTT
IFGRKNGSVTFSAAPASFTGARPQPGVFNATATLTIEFVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1787173, Length=344, Percent_Identity=28.1976744186047, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1789534, Length=390, Percent_Identity=26.9230769230769, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI145693100, Length=205, Percent_Identity=27.3170731707317, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38136; Mature: 38136

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWHYIFCIILFHLGLPCGYAANDGTCATRGGTHTLSLNFPLTTVSAANNVPGNTLIDI
CCCEEEEHEEHHHHHCCCCCCCCCCCEEEECCCEEEEEEECCEEEEECCCCCCCCEEEEE
ANATSSENYSVLCNCDSKHSNGAYHEIYYTADPAPGMVYSTTASGLAFYYLNEYVDVGTK
ECCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEEEEHHHHCCCCE
ISVLNAGYTAVPFEHVSNQATTTDHTCQGNKTTAVGVSLKTGADAKISFRIKRSINGTVV
EEEEECCCEEECHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCEEE
IPITDIALLYANISSTTTRGEAIAKVRISGSLTAPQSCQINAGQVIYFDFDTIPASEFSS
EEECCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCEECCCEEEEEECCCCCCHHHCC
TAGQAITSRKITKTVSIECTGMGYERTQKVDASFTGTNRSSDDTMVATDNADVGIKIYNK
HHCCHHHCCEEEEEEEEEEECCCCHHHEEECCEEECCCCCCCCCEEEECCCCEEEEEEEC
SNAEVSVNNGKLPADMGNTTIFGRKNGSVTFSAAPASFTGARPQPGVFNATATLTIEFVN
CCCEEEECCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEC
>Mature Secondary Structure
MKKWHYIFCIILFHLGLPCGYAANDGTCATRGGTHTLSLNFPLTTVSAANNVPGNTLIDI
CCCEEEEHEEHHHHHCCCCCCCCCCCEEEECCCEEEEEEECCEEEEECCCCCCCCEEEEE
ANATSSENYSVLCNCDSKHSNGAYHEIYYTADPAPGMVYSTTASGLAFYYLNEYVDVGTK
ECCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEEEEHHHHCCCCE
ISVLNAGYTAVPFEHVSNQATTTDHTCQGNKTTAVGVSLKTGADAKISFRIKRSINGTVV
EEEEECCCEEECHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCEEE
IPITDIALLYANISSTTTRGEAIAKVRISGSLTAPQSCQINAGQVIYFDFDTIPASEFSS
EEECCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCEECCCEEEEEECCCCCCHHHCC
TAGQAITSRKITKTVSIECTGMGYERTQKVDASFTGTNRSSDDTMVATDNADVGIKIYNK
HHCCHHHCCEEEEEEEEEEECCCCHHHEEECCEEECCCCCCCCCEEEECCCCEEEEEEEC
SNAEVSVNNGKLPADMGNTTIFGRKNGSVTFSAAPASFTGARPQPGVFNATATLTIEFVN
CCCEEEECCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]