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The map label for this gene is LytE3

Identifier: 20808596

GI number: 20808596

Start: 2127821

End: 2128795

Strand: Direct

Name: LytE3

Synonym: TTE2219

Alternate gene names: NA

Gene position: 2127821-2128795 (Clockwise)

Preceding gene: 20808569

Following gene: 20808602

Centisome position: 79.12

GC content: 42.15

Gene sequence:

>975_bases
ATGATTACAATAGAGATACCTTACGTCGTTCAGCCTGGCGATACTGTATTTTCAATTGCAAGAAAGTTCAACACTTCTGT
AGATGCCATAATAACCCGAAATAACATAATCAATCCCTCTTTGATATATCCAGGTCAAAGGCTAATAATACCAGTACAGG
GCAATTACTACACAGTACAACCAGGTGATACAGTGTATTCAATTGCTCAAAAATTCAATGTGCCCTATGAAAGCATAATA
TACATTAACAATCTGAGCTATCCTTATAACATCTACCCAGGCCAAAGATTGTTCATTCCCGGAATATCAATGAACTATCC
GCCATCACCGGTACCACCTATTCCATCCTCCGGCCCCTGTCCGAAATACTACACTGTGCAGCCAGGTGATACTTTATGGA
GCATAGCGCAGAAATTTGGAATATCCATAGATGAACTCATCCGAGCTAACTACCTCGTAAATCCAGGTATGATATACCCA
GGGCAGACTCTCATAATACCATGCCCTTCGACGCCTCCAGTAGAATACCCTACTTTAAGGCTGGGAGATAGAGGACCTTT
TGTAGTTAACTTACAGGCTCGCCTTAAATCTCTTGGCTTTGATCCAGGACCTATTGACGGAATCTTTGGTCCCAAAACCG
AAGCAGCTGTAAAGGCTTATCAGCAAAGCAGAGGTCTACCCCCTACCGGCATAGTTGATGAAACAACCTGGAATGCGCTT
TTATTTGCCACACCTCCAGCACCACCACCTGCTTCCGGAAAAGTATATATAGTAAAGCCTGGAGAATCCCTGTGGACAAT
AGCCCAAAAATTTAATACAACAGTAGAAGCTATATTAAAGGCAAATCCTGAAATAAAAGACCCAAATCTGATATACCCCG
GCCAGAGAATAATAATCCCTACTTCACAGCAGGCTGCCACCTCTCAGGAAATAATTACTGACAAAGAACCACAAGACAAG
GAAGAAGAAAAATAG

Upstream 100 bases:

>100_bases
TTTCTCGAAAAAATTTTTATTCCAATGTTTTAGAGACTATAGATATGCGAATTTAAGGCTTTAATTTGACGTTACAGAAT
CTAGGAAAGGAGGTAATAAT

Downstream 100 bases:

>100_bases
TCAGGAGACTTCTCCTGACTATTTCTTTAGGCTTTCTATATACTTTTCTGCAGCGTAAGCGGCTGTCGCTCCATCTCCTG
CAGCTGTTATCACCTGTCTT

Product: LysM repeat-containing protein

Products: NA

Alternate protein names: 1,4-beta-N-acetylmuramoylhydrolase; Lysozyme; Peptidoglycan hydrolase; Pg-hydrolase 2 [H]

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MITIEIPYVVQPGDTVFSIARKFNTSVDAIITRNNIINPSLIYPGQRLIIPVQGNYYTVQPGDTVYSIAQKFNVPYESII
YINNLSYPYNIYPGQRLFIPGISMNYPPSPVPPIPSSGPCPKYYTVQPGDTLWSIAQKFGISIDELIRANYLVNPGMIYP
GQTLIIPCPSTPPVEYPTLRLGDRGPFVVNLQARLKSLGFDPGPIDGIFGPKTEAAVKAYQQSRGLPPTGIVDETTWNAL
LFATPPAPPPASGKVYIVKPGESLWTIAQKFNTTVEAILKANPEIKDPNLIYPGQRIIIPTSQQAATSQEIITDKEPQDK
EEEK

Sequences:

>Translated_324_residues
MITIEIPYVVQPGDTVFSIARKFNTSVDAIITRNNIINPSLIYPGQRLIIPVQGNYYTVQPGDTVYSIAQKFNVPYESII
YINNLSYPYNIYPGQRLFIPGISMNYPPSPVPPIPSSGPCPKYYTVQPGDTLWSIAQKFGISIDELIRANYLVNPGMIYP
GQTLIIPCPSTPPVEYPTLRLGDRGPFVVNLQARLKSLGFDPGPIDGIFGPKTEAAVKAYQQSRGLPPTGIVDETTWNAL
LFATPPAPPPASGKVYIVKPGESLWTIAQKFNTTVEAILKANPEIKDPNLIYPGQRIIIPTSQQAATSQEIITDKEPQDK
EEEK
>Mature_324_residues
MITIEIPYVVQPGDTVFSIARKFNTSVDAIITRNNIINPSLIYPGQRLIIPVQGNYYTVQPGDTVYSIAQKFNVPYESII
YINNLSYPYNIYPGQRLFIPGISMNYPPSPVPPIPSSGPCPKYYTVQPGDTLWSIAQKFGISIDELIRANYLVNPGMIYP
GQTLIIPCPSTPPVEYPTLRLGDRGPFVVNLQARLKSLGFDPGPIDGIFGPKTEAAVKAYQQSRGLPPTGIVDETTWNAL
LFATPPAPPPASGKVYIVKPGESLWTIAQKFNTTVEAILKANPEIKDPNLIYPGQRIIIPTSQQAATSQEIITDKEPQDK
EEEK

Specific function: May work in concert with and potentiate the processive hydrolytic action of muramidase-1, which requires binding of the enzyme to non-reducing ends of glycan chains. Hydrolysis in the midst of glycan chains would increase the number of binding sites for m

COG id: COG1388

COG function: function code M; FOG: LysM repeat

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013338
- InterPro:   IPR002901
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01832 Glucosaminidase; PF01476 LysM [H]

EC number: =3.2.1.17 [H]

Molecular weight: Translated: 35704; Mature: 35704

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITIEIPYVVQPGDTVFSIARKFNTSVDAIITRNNIINPSLIYPGQRLIIPVQGNYYTVQ
CEEEEECEEECCCCHHHHHHHHHCCCEEEEEECCCCCCCCEECCCCEEEEEECCCEEEEC
PGDTVYSIAQKFNVPYESIIYINNLSYPYNIYPGQRLFIPGISMNYPPSPVPPIPSSGPC
CCCHHHHHHHHHCCCHHHEEEEECCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCC
PKYYTVQPGDTLWSIAQKFGISIDELIRANYLVNPGMIYPGQTLIIPCPSTPPVEYPTLR
CCEEEECCCHHHHHHHHHHCCCHHHHHHHCEEECCCEECCCCEEEEECCCCCCCCCCEEE
LGDRGPFVVNLQARLKSLGFDPGPIDGIFGPKTEAAVKAYQQSRGLPPTGIVDETTWNAL
ECCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEE
LFATPPAPPPASGKVYIVKPGESLWTIAQKFNTTVEAILKANPEIKDPNLIYPGQRIIIP
EEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEE
TSQQAATSQEIITDKEPQDKEEEK
CCHHHCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MITIEIPYVVQPGDTVFSIARKFNTSVDAIITRNNIINPSLIYPGQRLIIPVQGNYYTVQ
CEEEEECEEECCCCHHHHHHHHHCCCEEEEEECCCCCCCCEECCCCEEEEEECCCEEEEC
PGDTVYSIAQKFNVPYESIIYINNLSYPYNIYPGQRLFIPGISMNYPPSPVPPIPSSGPC
CCCHHHHHHHHHCCCHHHEEEEECCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCC
PKYYTVQPGDTLWSIAQKFGISIDELIRANYLVNPGMIYPGQTLIIPCPSTPPVEYPTLR
CCEEEECCCHHHHHHHHHHCCCHHHHHHHCEEECCCEECCCCEEEEECCCCCCCCCCEEE
LGDRGPFVVNLQARLKSLGFDPGPIDGIFGPKTEAAVKAYQQSRGLPPTGIVDETTWNAL
ECCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEE
LFATPPAPPPASGKVYIVKPGESLWTIAQKFNTTVEAILKANPEIKDPNLIYPGQRIIIP
EEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEE
TSQQAATSQEIITDKEPQDKEEEK
CCHHHCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1347040; 2753858 [H]