| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is MviM5 [H]
Identifier: 20808538
GI number: 20808538
Start: 2071555
End: 2072676
Strand: Reverse
Name: MviM5 [H]
Synonym: TTE2148
Alternate gene names: 20808538
Gene position: 2072676-2071555 (Counterclockwise)
Preceding gene: 20808539
Following gene: 20808537
Centisome position: 77.07
GC content: 35.92
Gene sequence:
>1122_bases GTGAGCAAAAAAATGATAAAACTCGGATTTGCTGGACTTGGGTTTATTGGATCAATTCACGCTATTGCCTGCTTTTCAAT GCCACTTATATTTAAAAATCTTCCTTTTGAAGTTAAACTGGGAAGAGTTTATAAAAACAACCTCAATGACATACCTCATT TTTTTGAAAAAGGGGCAAAGAGCTTAGAGGAAGTTTTAGAAAATTCAGATGCTGTTGATATATGTACTCCCAATTACCTT CATTATGAACAAGCCATGAAGACCATAGAAAGAGGTATACCTTTGTATCTTGAAAAGCCTATAGGGGTAAACAGTAAGGA AGCCTATGATATAATGGAGAGTGCAAAAAAGAAAGGACTAATACATCAGACAGCTTTGATGTACAGGTTTATGCCTGCTA TAACACAGGCAAGGGATATGATTAAAAATGGGGAAATAGGAGAAATTTTAAATTTTAAGGCTTTGATGCTTCACTCTGGA TATATGGACCCTAAAAGGCCTATTTCGTGGAAATTGAAAAAGTCCACTTCTGGTGGTGGAGCTATACTGGATATGGGGAT ACACCTTGTAGATGCAGTAAGGTTCATGCTGGGGGAGATAAAATCTTTGAGGGCGATTTCTAAAACTTATTTTAAAGAAA GACCCGTGGAGAAAGGTTCAGAAATTTACGATTGCGTAGATGTGGATGACTGGACAAGTGTAGAGGTAGAACTGGAGGGA GGAGGCTGGGGAACCATGGAAGCTTCTAGAATATCTCCTGATATTGAGGAAGAGACGAAATTTGAAATTTATGGTACTAA AGGGTCGATAAAAATATCTACAAAGCACCCGAGATATGCTATTTTGTACAAAAAGCAAGAGAATAAAGAGATAACAGGGG ATTATGATAATAAAAGTGAATTTAGCAAATATGTGAATTCAATTTATCCCCCCGAAAAATACTCACTGGGTTGGATGGTA GATATGCACATGGCAAGCCTTATAAACTTTTTTACAAACATTGTAGAAAGTGAAATTGTATTTGAGGAGACACCTACATT TGAAGAGGCTTATAAAGACCAAGTTGTACTGGATAAAATAATTTTATCTGCTGAAAATAATGGTGAAACTATAAAGTTTT AA
Upstream 100 bases:
>100_bases AGAAACTCTATAAGTCTAAAGGTAGCGTTAGAAGCTACCTTTTAAATATTTTAGTGCTATAATTATTTTGTAGATTTTAT AGAAAATAAGGAGTGATTGT
Downstream 100 bases:
>100_bases AAATAGGGGTAATAAGAGATGAAAGTACCGGTCAAAGAAGAGTTTTTAAAGAGGATGAAGGAGCTTTTAAAGGAAGAGTA CGAAGCCTTTTTGAAGGAGT
Product: dehydrogenase and related proteins
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MSKKMIKLGFAGLGFIGSIHAIACFSMPLIFKNLPFEVKLGRVYKNNLNDIPHFFEKGAKSLEEVLENSDAVDICTPNYL HYEQAMKTIERGIPLYLEKPIGVNSKEAYDIMESAKKKGLIHQTALMYRFMPAITQARDMIKNGEIGEILNFKALMLHSG YMDPKRPISWKLKKSTSGGGAILDMGIHLVDAVRFMLGEIKSLRAISKTYFKERPVEKGSEIYDCVDVDDWTSVEVELEG GGWGTMEASRISPDIEEETKFEIYGTKGSIKISTKHPRYAILYKKQENKEITGDYDNKSEFSKYVNSIYPPEKYSLGWMV DMHMASLINFFTNIVESEIVFEETPTFEEAYKDQVVLDKIILSAENNGETIKF
Sequences:
>Translated_373_residues MSKKMIKLGFAGLGFIGSIHAIACFSMPLIFKNLPFEVKLGRVYKNNLNDIPHFFEKGAKSLEEVLENSDAVDICTPNYL HYEQAMKTIERGIPLYLEKPIGVNSKEAYDIMESAKKKGLIHQTALMYRFMPAITQARDMIKNGEIGEILNFKALMLHSG YMDPKRPISWKLKKSTSGGGAILDMGIHLVDAVRFMLGEIKSLRAISKTYFKERPVEKGSEIYDCVDVDDWTSVEVELEG GGWGTMEASRISPDIEEETKFEIYGTKGSIKISTKHPRYAILYKKQENKEITGDYDNKSEFSKYVNSIYPPEKYSLGWMV DMHMASLINFFTNIVESEIVFEETPTFEEAYKDQVVLDKIILSAENNGETIKF >Mature_372_residues SKKMIKLGFAGLGFIGSIHAIACFSMPLIFKNLPFEVKLGRVYKNNLNDIPHFFEKGAKSLEEVLENSDAVDICTPNYLH YEQAMKTIERGIPLYLEKPIGVNSKEAYDIMESAKKKGLIHQTALMYRFMPAITQARDMIKNGEIGEILNFKALMLHSGY MDPKRPISWKLKKSTSGGGAILDMGIHLVDAVRFMLGEIKSLRAISKTYFKERPVEKGSEIYDCVDVDDWTSVEVELEGG GWGTMEASRISPDIEEETKFEIYGTKGSIKISTKHPRYAILYKKQENKEITGDYDNKSEFSKYVNSIYPPEKYSLGWMVD MHMASLINFFTNIVESEIVFEETPTFEEAYKDQVVLDKIILSAENNGETIKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gfo/idh/mocA family [H]
Homologues:
Organism=Escherichia coli, GI87082405, Length=349, Percent_Identity=27.2206303724928, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1787574, Length=180, Percent_Identity=27.2222222222222, Blast_Score=85, Evalue=7e-18, Organism=Drosophila melanogaster, GI24581117, Length=281, Percent_Identity=25.6227758007117, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 42396; Mature: 42265
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKMIKLGFAGLGFIGSIHAIACFSMPLIFKNLPFEVKLGRVYKNNLNDIPHFFEKGAK CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHHHHH SLEEVLENSDAVDICTPNYLHYEQAMKTIERGIPLYLEKPIGVNSKEAYDIMESAKKKGL HHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCH IHQTALMYRFMPAITQARDMIKNGEIGEILNFKALMLHSGYMDPKRPISWKLKKSTSGGG HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCC AILDMGIHLVDAVRFMLGEIKSLRAISKTYFKERPVEKGSEIYDCVDVDDWTSVEVELEG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEECC GGWGTMEASRISPDIEEETKFEIYGTKGSIKISTKHPRYAILYKKQENKEITGDYDNKSE CCCCCCCHHHCCCCCCCCCEEEEEECCCEEEEECCCCCEEEEEEECCCCCCCCCCCCHHH FSKYVNSIYPPEKYSLGWMVDMHMASLINFFTNIVESEIVFEETPTFEEAYKDQVVLDKI HHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHH ILSAENNGETIKF HHCCCCCCCEECC >Mature Secondary Structure SKKMIKLGFAGLGFIGSIHAIACFSMPLIFKNLPFEVKLGRVYKNNLNDIPHFFEKGAK CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHHHHH SLEEVLENSDAVDICTPNYLHYEQAMKTIERGIPLYLEKPIGVNSKEAYDIMESAKKKGL HHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCH IHQTALMYRFMPAITQARDMIKNGEIGEILNFKALMLHSGYMDPKRPISWKLKKSTSGGG HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCC AILDMGIHLVDAVRFMLGEIKSLRAISKTYFKERPVEKGSEIYDCVDVDDWTSVEVELEG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEECC GGWGTMEASRISPDIEEETKFEIYGTKGSIKISTKHPRYAILYKKQENKEITGDYDNKSE CCCCCCCHHHCCCCCCCCCEEEEEECCCEEEEECCCCCEEEEEEECCCCCCCCCCCCHHH FSKYVNSIYPPEKYSLGWMVDMHMASLINFFTNIVESEIVFEETPTFEEAYKDQVVLDKI HHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHH ILSAENNGETIKF HHCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353932; 9384377; 8407808 [H]