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The map label for this gene is UgpB4 [C]

Identifier: 20808342

GI number: 20808342

Start: 1881870

End: 1883186

Strand: Reverse

Name: UgpB4 [C]

Synonym: TTE1938

Alternate gene names: 20808342

Gene position: 1883186-1881870 (Counterclockwise)

Preceding gene: 20808343

Following gene: 20808341

Centisome position: 70.02

GC content: 36.98

Gene sequence:

>1317_bases
ATGAAAAAGTGGAGTAAGCTAATTTATATTGTTGTTTCTTTAATTCTAGTGTTTGCGCTATTTACAAGTGGTTGTTCTTC
TAAACAACCAGAGACAAGCCAGGCACCGTCAACCGAACAAAAATCAGAACCTACTCAAAAAGTGACTTTGGATTTTGTAT
GGTTTACTGACGGAGTAGAAGGGCAAGTAATGAAAGAGATTATTAAAGATTATCAAAAAACACATCCTAATGTAGAGATT
AACTTAGTCGAGGTGCCTTACGACGACTTAGAAGCAAAACTAAAAACAATGATTACAGGAGGCAAACCGCCAGCTTTAGC
ACGTGTTACGAACCCGGGAGCGTTTGCTTCAGCTGCATTAGATTTAACTCCTTATCTTGGAGATAAAGATCAGTTTATGA
GTCAATTCCTTGATGGATTGAAATATTATTGCATTGTTGAAGGAAAGCTTATTGCAGCACCAATGGAGGTAACAGCAAAT
GGCTTGATATACAACAAAACATTATTTGATAAGGCAGGCGTGAAGGTACCCCAGTCTCCAGATGAAGTTTGGACTTGGGA
TGAATTTGCTAATGCTATTAAAGAAGTAAAAGCTAAAGCAGGAGCAAAATATGGGGTAGTATGGGATCCAACTCCTCACA
GATGGACAACTCTGCTTTATGAGTTTGGCGGAAGCATATTTAATAGCGATGCTACAGATACAAACATAAATAAACCAGAA
GCTGTAGAGACACTAAATTACTTCAAAAAATTAGTTGATGAAGATATAGTTTCTAAAGCTACATGGTTGGGTGGAGAAAA
TGCTAATAACATTTTTAGGTCTGGTACAGCTGCAGCTCACTTATCTGGAAGTTGGATGATTTCAAATTACAGAGATACAA
TTAAGAATTTTGAGTGGGGTGTAACTTATCTACCCAAAGCCAAAATAAGATCTTCAGTCTTGGGTGCGAAGTTTGTAATG
GCATTTAAAAATTCAGGTGTAGAAAAGGAAGCAGGAGAGTTTATAAAATATTTGGCTTCTAAAGAAGTGGATGATAAATA
TGTAAGAGAATCTTTGTTCTTGAGCCCAAGGAAAAATCCAGATGTGACTTATGATTTTGGAACGGAATTCTTTAAGATTT
TCAGCAACGAATTGGCTGTATCTCCTCCAGCTGCTTCATACGATTGGTCAAGACAAGATATAATACCTAAGTTTACAAGT
GACTTAAAAGAAGCAATCGTTTCTGTATTGCAAGGTAAACAAACAGCTCAACAAGCTTTAGATCATGTTGCAGAGTTAGC
AAGACAAGCCATAAAAGAGGCTCAGCAGGGTAAGTAA

Upstream 100 bases:

>100_bases
GTAGAAAATGATATAAAGGAGGTGATATACCAAAGAAACATATTCAATACCTAGTTTAAAATGTTTAAGTGATTCTAAGA
AAAGAGGGGGAAGTAGGGTT

Downstream 100 bases:

>100_bases
TATACAATAAAATAGGCGGGTAGTGAAAATTAAATTTCATTACCCGCCTATTTTAGATAAATTAAAATAAACAGAGGTGT
GAATTGTATGGAAAGAAGTT

Product: sugar-binding periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MKKWSKLIYIVVSLILVFALFTSGCSSKQPETSQAPSTEQKSEPTQKVTLDFVWFTDGVEGQVMKEIIKDYQKTHPNVEI
NLVEVPYDDLEAKLKTMITGGKPPALARVTNPGAFASAALDLTPYLGDKDQFMSQFLDGLKYYCIVEGKLIAAPMEVTAN
GLIYNKTLFDKAGVKVPQSPDEVWTWDEFANAIKEVKAKAGAKYGVVWDPTPHRWTTLLYEFGGSIFNSDATDTNINKPE
AVETLNYFKKLVDEDIVSKATWLGGENANNIFRSGTAAAHLSGSWMISNYRDTIKNFEWGVTYLPKAKIRSSVLGAKFVM
AFKNSGVEKEAGEFIKYLASKEVDDKYVRESLFLSPRKNPDVTYDFGTEFFKIFSNELAVSPPAASYDWSRQDIIPKFTS
DLKEAIVSVLQGKQTAQQALDHVAELARQAIKEAQQGK

Sequences:

>Translated_438_residues
MKKWSKLIYIVVSLILVFALFTSGCSSKQPETSQAPSTEQKSEPTQKVTLDFVWFTDGVEGQVMKEIIKDYQKTHPNVEI
NLVEVPYDDLEAKLKTMITGGKPPALARVTNPGAFASAALDLTPYLGDKDQFMSQFLDGLKYYCIVEGKLIAAPMEVTAN
GLIYNKTLFDKAGVKVPQSPDEVWTWDEFANAIKEVKAKAGAKYGVVWDPTPHRWTTLLYEFGGSIFNSDATDTNINKPE
AVETLNYFKKLVDEDIVSKATWLGGENANNIFRSGTAAAHLSGSWMISNYRDTIKNFEWGVTYLPKAKIRSSVLGAKFVM
AFKNSGVEKEAGEFIKYLASKEVDDKYVRESLFLSPRKNPDVTYDFGTEFFKIFSNELAVSPPAASYDWSRQDIIPKFTS
DLKEAIVSVLQGKQTAQQALDHVAELARQAIKEAQQGK
>Mature_438_residues
MKKWSKLIYIVVSLILVFALFTSGCSSKQPETSQAPSTEQKSEPTQKVTLDFVWFTDGVEGQVMKEIIKDYQKTHPNVEI
NLVEVPYDDLEAKLKTMITGGKPPALARVTNPGAFASAALDLTPYLGDKDQFMSQFLDGLKYYCIVEGKLIAAPMEVTAN
GLIYNKTLFDKAGVKVPQSPDEVWTWDEFANAIKEVKAKAGAKYGVVWDPTPHRWTTLLYEFGGSIFNSDATDTNINKPE
AVETLNYFKKLVDEDIVSKATWLGGENANNIFRSGTAAAHLSGSWMISNYRDTIKNFEWGVTYLPKAKIRSSVLGAKFVM
AFKNSGVEKEAGEFIKYLASKEVDDKYVRESLFLSPRKNPDVTYDFGTEFFKIFSNELAVSPPAASYDWSRQDIIPKFTS
DLKEAIVSVLQGKQTAQQALDHVAELARQAIKEAQQGK

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=426, Percent_Identity=24.4131455399061, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 48838; Mature: 48838

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWSKLIYIVVSLILVFALFTSGCSSKQPETSQAPSTEQKSEPTQKVTLDFVWFTDGVE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCEEEEEEEEECCCCC
GQVMKEIIKDYQKTHPNVEINLVEVPYDDLEAKLKTMITGGKPPALARVTNPGAFASAAL
HHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHH
DLTPYLGDKDQFMSQFLDGLKYYCIVEGKLIAAPMEVTANGLIYNKTLFDKAGVKVPQSP
CCCCCCCCHHHHHHHHHHCCEEEEEECCEEEECCHHHCCCCEEEECHHHHHCCCCCCCCC
DEVWTWDEFANAIKEVKAKAGAKYGVVWDPTPHRWTTLLYEFGGSIFNSDATDTNINKPE
CCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCH
AVETLNYFKKLVDEDIVSKATWLGGENANNIFRSGTAAAHLSGSWMISNYRDTIKNFEWG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEECCCCEEEHHHHHHHCCCCCC
VTYLPKAKIRSSVLGAKFVMAFKNSGVEKEAGEFIKYLASKEVDDKYVRESLFLSPRKNP
CEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
DVTYDFGTEFFKIFSNELAVSPPAASYDWSRQDIIPKFTSDLKEAIVSVLQGKQTAQQAL
CEEEHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCHHHHHHHH
DHVAELARQAIKEAQQGK
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKWSKLIYIVVSLILVFALFTSGCSSKQPETSQAPSTEQKSEPTQKVTLDFVWFTDGVE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCEEEEEEEEECCCCC
GQVMKEIIKDYQKTHPNVEINLVEVPYDDLEAKLKTMITGGKPPALARVTNPGAFASAAL
HHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHH
DLTPYLGDKDQFMSQFLDGLKYYCIVEGKLIAAPMEVTANGLIYNKTLFDKAGVKVPQSP
CCCCCCCCHHHHHHHHHHCCEEEEEECCEEEECCHHHCCCCEEEECHHHHHCCCCCCCCC
DEVWTWDEFANAIKEVKAKAGAKYGVVWDPTPHRWTTLLYEFGGSIFNSDATDTNINKPE
CCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCH
AVETLNYFKKLVDEDIVSKATWLGGENANNIFRSGTAAAHLSGSWMISNYRDTIKNFEWG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEECCCCEEEHHHHHHHCCCCCC
VTYLPKAKIRSSVLGAKFVMAFKNSGVEKEAGEFIKYLASKEVDDKYVRESLFLSPRKNP
CEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
DVTYDFGTEFFKIFSNELAVSPPAASYDWSRQDIIPKFTSDLKEAIVSVLQGKQTAQQAL
CEEEHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCHHHHHHHH
DHVAELARQAIKEAQQGK
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA