Click here to switch to the map view.

The map label for this gene is MalF4 [H]

Identifier: 20808341

GI number: 20808341

Start: 1880898

End: 1881782

Strand: Reverse

Name: MalF4 [H]

Synonym: TTE1937

Alternate gene names: 20808341

Gene position: 1881782-1880898 (Counterclockwise)

Preceding gene: 20808342

Following gene: 20808340

Centisome position: 69.97

GC content: 31.64

Gene sequence:

>885_bases
ATGGAAAGAAGTTATACTATGTACAAACTGGAAAAAAAGTTAATTCCATATTTATTTTTATTGCCTAATTTACTTATTTT
TGGGATTTTCGTAATTTTCCCAGCGTTTTTCGGGTTGTACTATTCTTTTACTAATTTTGACGGACTTTCAAGAATGGATT
TTATAGGATTACAGAATTATATTAATATTTTTCATGACACTCTGTTTTGGCATTCTTTTCTAAGGACAACAATATATGCA
GCTATAGTGGTGCCGTTGATATATGTAGGAGCATTAGGAACGGCTATTTTACTTACACAAAAAATTATTTTAAAGGGTAT
TTTTAGGGCTATTATTTACTGGCCTACAATGGTTTCGTTTATTGTAGTTGGTTTGATATGGAAATGGATTTTTGGAGATA
GTTTTGGTATTTTAAATTATTTTTTAGAATTAATTGGTAAACAACCAATTCCGTGGCTATCCAATGGATTTTTTGCTAAC
ATTACGGTAATAATAGCAACTTTGTGGTCAAGAATTGGATTTTATATGGTAATTTTCCTTGCAGCTTTGGAAAGTATACC
TACAGTATATTACGAAGCTGCAGATATAGATGGTGCATCTCCAATACGGAAATTCTTTAATATTACACTACCATTATTGA
AACCTACAAGTCTTTTAGTAATTATTCTTTCTCTAATAGATGCGTTTAAAGCTTTTCCGTTGATTTTAGCCTTAACAGGA
GGAGGTCCTGGCAGAGATACCACATACGTTGTACAGCATATTTATCAATTTGCTTTTATCAAAACAAAAATGGGATATGC
AAGTGCAATGTCTGTAATACTATTTCTGGTTATTGCTATACTAACGTGGTTGCAGTTTAGGGTAGGAAGAGGAGGAGAGA
TATAA

Upstream 100 bases:

>100_bases
GCAGGGTAAGTAATATACAATAAAATAGGCGGGTAGTGAAAATTAAATTTCATTACCCGCCTATTTTAGATAAATTAAAA
TAAACAGAGGTGTGAATTGT

Downstream 100 bases:

>100_bases
ATGAGTTTACAAAAAATTACTTCAAAAGCTATAACATATACTTTGCTAACCCTTGTTACTTTATTCTTTCTTATTCCAGT
ATTATGGGTAGTGTTTTCAT

Product: ABC-type sugar transport systems, permease components

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MERSYTMYKLEKKLIPYLFLLPNLLIFGIFVIFPAFFGLYYSFTNFDGLSRMDFIGLQNYINIFHDTLFWHSFLRTTIYA
AIVVPLIYVGALGTAILLTQKIILKGIFRAIIYWPTMVSFIVVGLIWKWIFGDSFGILNYFLELIGKQPIPWLSNGFFAN
ITVIIATLWSRIGFYMVIFLAALESIPTVYYEAADIDGASPIRKFFNITLPLLKPTSLLVIILSLIDAFKAFPLILALTG
GGPGRDTTYVVQHIYQFAFIKTKMGYASAMSVILFLVIAILTWLQFRVGRGGEI

Sequences:

>Translated_294_residues
MERSYTMYKLEKKLIPYLFLLPNLLIFGIFVIFPAFFGLYYSFTNFDGLSRMDFIGLQNYINIFHDTLFWHSFLRTTIYA
AIVVPLIYVGALGTAILLTQKIILKGIFRAIIYWPTMVSFIVVGLIWKWIFGDSFGILNYFLELIGKQPIPWLSNGFFAN
ITVIIATLWSRIGFYMVIFLAALESIPTVYYEAADIDGASPIRKFFNITLPLLKPTSLLVIILSLIDAFKAFPLILALTG
GGPGRDTTYVVQHIYQFAFIKTKMGYASAMSVILFLVIAILTWLQFRVGRGGEI
>Mature_294_residues
MERSYTMYKLEKKLIPYLFLLPNLLIFGIFVIFPAFFGLYYSFTNFDGLSRMDFIGLQNYINIFHDTLFWHSFLRTTIYA
AIVVPLIYVGALGTAILLTQKIILKGIFRAIIYWPTMVSFIVVGLIWKWIFGDSFGILNYFLELIGKQPIPWLSNGFFAN
ITVIIATLWSRIGFYMVIFLAALESIPTVYYEAADIDGASPIRKFFNITLPLLKPTSLLVIILSLIDAFKAFPLILALTG
GGPGRDTTYVVQHIYQFAFIKTKMGYASAMSVILFLVIAILTWLQFRVGRGGEI

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=282, Percent_Identity=34.3971631205674, Blast_Score=144, Evalue=5e-36,
Organism=Escherichia coli, GI1787570, Length=245, Percent_Identity=30.2040816326531, Blast_Score=104, Evalue=8e-24,
Organism=Escherichia coli, GI1790465, Length=253, Percent_Identity=31.6205533596838, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33469; Mature: 33469

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]