Click here to switch to the map view.

The map label for this gene is OmpR4 [H]

Identifier: 20808060

GI number: 20808060

Start: 1584674

End: 1585396

Strand: Reverse

Name: OmpR4 [H]

Synonym: TTE1633

Alternate gene names: 20808060

Gene position: 1585396-1584674 (Counterclockwise)

Preceding gene: 20808061

Following gene: 20808059

Centisome position: 58.95

GC content: 40.39

Gene sequence:

>723_bases
ATGCCTTATACTGTCCTGGTGATAGAAGATGAGATCCATATCTTAGAGCTATTGAGATATAATCTAGAGGCTGCAGGATA
TAAAGTCATGGCTTCGGAAAATGGGAAAGAAGGTTTGGAGAAAGCTTTGGAAGAAAAGCCGGATCTGCTGATACTAGATT
TGATGTTACCTGATATGGATGGGTTAGAGATATGCAAAGTGCTGAAGAAAAATGAGGATACTAAGAACATTCCAATAATA
ATGCTGACTGCAAGAAGTGAAGAATTTGATAAGGTATTGGGACTAGAACTGGGAGCTGATGATTACATTACTAAACCTTT
TAGTGTGAGAGAGCTTTTAGCTAGAATAAAGGCGGTTCTTCGGCGAACGCAGCAGGTAGAGGAAGAAAAAGAAGAAATAA
TAAAGTTTGGGGATATAGTGATAGATACTGGAAAGCATGTAGTGTACAAGAAAGGAAAGGCGCTGGATCTGACTTTGAAA
GAATTTGAGCTTTTAAAGCTCCTCTCTCAAAATAAAGGGAAAGTGCTGACGAGAGACTATTTGCTGGACAAGGTGTGGGG
ATACGAATACGCTGGTGAAACGAGGACTGTTGACGTTCACATAAGGCATTTGAGAAAGAAGATAGAAGATGACGACAAGG
CGCCTGTCTATATTGAGACTGTGCGAGGGATAGGTTACAAACTCAGAGACTTGAGTGAAGACAAAGGTGAAGAAGATGCT
TAG

Upstream 100 bases:

>100_bases
ATTTAAGGATATAAACACTTTTATGGATGAGCTAAAAAAACTTCTTAAAGAGAATGAGGAGAAAAAACAGAAGGAGTAAA
GCCTATTTGGAGGGGTAAAA

Downstream 100 bases:

>100_bases
GAAATCTTATTATAGGTTATTTTTTATAAACCTCATAGGGATTTTGACATTGGCTTTATTTTTTTGGGGCAAAGTCTCAA
TTGAAAATTTGCTCATAGGT

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MPYTVLVIEDEIHILELLRYNLEAAGYKVMASENGKEGLEKALEEKPDLLILDLMLPDMDGLEICKVLKKNEDTKNIPII
MLTARSEEFDKVLGLELGADDYITKPFSVRELLARIKAVLRRTQQVEEEKEEIIKFGDIVIDTGKHVVYKKGKALDLTLK
EFELLKLLSQNKGKVLTRDYLLDKVWGYEYAGETRTVDVHIRHLRKKIEDDDKAPVYIETVRGIGYKLRDLSEDKGEEDA

Sequences:

>Translated_240_residues
MPYTVLVIEDEIHILELLRYNLEAAGYKVMASENGKEGLEKALEEKPDLLILDLMLPDMDGLEICKVLKKNEDTKNIPII
MLTARSEEFDKVLGLELGADDYITKPFSVRELLARIKAVLRRTQQVEEEKEEIIKFGDIVIDTGKHVVYKKGKALDLTLK
EFELLKLLSQNKGKVLTRDYLLDKVWGYEYAGETRTVDVHIRHLRKKIEDDDKAPVYIETVRGIGYKLRDLSEDKGEEDA
>Mature_239_residues
PYTVLVIEDEIHILELLRYNLEAAGYKVMASENGKEGLEKALEEKPDLLILDLMLPDMDGLEICKVLKKNEDTKNIPIIM
LTARSEEFDKVLGLELGADDYITKPFSVRELLARIKAVLRRTQQVEEEKEEIIKFGDIVIDTGKHVVYKKGKALDLTLKE
FELLKLLSQNKGKVLTRDYLLDKVWGYEYAGETRTVDVHIRHLRKKIEDDDKAPVYIETVRGIGYKLRDLSEDKGEEDA

Specific function: Member of the two-component regulatory system phoP/phoR involved in the regulation of alkaline phosphatase genes phoA and phoB and of phosphodiesterase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=228, Percent_Identity=42.9824561403509, Blast_Score=179, Evalue=1e-46,
Organism=Escherichia coli, GI1789809, Length=228, Percent_Identity=40.3508771929825, Blast_Score=177, Evalue=5e-46,
Organism=Escherichia coli, GI1788394, Length=223, Percent_Identity=42.152466367713, Blast_Score=176, Evalue=1e-45,
Organism=Escherichia coli, GI1786911, Length=225, Percent_Identity=40.8888888888889, Blast_Score=174, Evalue=3e-45,
Organism=Escherichia coli, GI1790860, Length=232, Percent_Identity=42.2413793103448, Blast_Score=164, Evalue=5e-42,
Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=40.1785714285714, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI87082012, Length=225, Percent_Identity=40, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI2367329, Length=227, Percent_Identity=38.3259911894273, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1789402, Length=225, Percent_Identity=37.7777777777778, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=36.5217391304348, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1787375, Length=222, Percent_Identity=35.5855855855856, Blast_Score=127, Evalue=6e-31,
Organism=Escherichia coli, GI1790552, Length=225, Percent_Identity=36, Blast_Score=127, Evalue=6e-31,
Organism=Escherichia coli, GI1787229, Length=234, Percent_Identity=32.9059829059829, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=34.051724137931, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI1790299, Length=126, Percent_Identity=32.5396825396825, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788550, Length=129, Percent_Identity=29.4573643410853, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1790437, Length=135, Percent_Identity=30.3703703703704, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1790576, Length=114, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27592; Mature: 27461

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYTVLVIEDEIHILELLRYNLEAAGYKVMASENGKEGLEKALEEKPDLLILDLMLPDMD
CCEEEEEEECCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCC
GLEICKVLKKNEDTKNIPIIMLTARSEEFDKVLGLELGADDYITKPFSVRELLARIKAVL
HHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHH
RRTQQVEEEKEEIIKFGDIVIDTGKHVVYKKGKALDLTLKEFELLKLLSQNKGKVLTRDY
HHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCEEEEHHHHHHHHHHHHCCCCCEEHHHH
LLDKVWGYEYAGETRTVDVHIRHLRKKIEDDDKAPVYIETVRGIGYKLRDLSEDKGEEDA
HHHHHCCCEECCCCEEEEHHHHHHHHHCCCCCCCCEEEEEHHCCCHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PYTVLVIEDEIHILELLRYNLEAAGYKVMASENGKEGLEKALEEKPDLLILDLMLPDMD
CEEEEEEECCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCC
GLEICKVLKKNEDTKNIPIIMLTARSEEFDKVLGLELGADDYITKPFSVRELLARIKAVL
HHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHH
RRTQQVEEEKEEIIKFGDIVIDTGKHVVYKKGKALDLTLKEFELLKLLSQNKGKVLTRDY
HHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCEEEEHHHHHHHHHHHHCCCCCEEHHHH
LLDKVWGYEYAGETRTVDVHIRHLRKKIEDDDKAPVYIETVRGIGYKLRDLSEDKGEEDA
HHHHHCCCEECCCCEEEEHHHHHHHHHCCCCCCCCEEEEEHHCCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1454550; 3036763; 9387221; 9384377; 8045898; 3142862 [H]