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The map label for this gene is nrdR [H]

Identifier: 20808061

GI number: 20808061

Start: 1585418

End: 1585894

Strand: Reverse

Name: nrdR [H]

Synonym: TTE1634

Alternate gene names: 20808061

Gene position: 1585894-1585418 (Counterclockwise)

Preceding gene: 20808062

Following gene: 20808060

Centisome position: 58.97

GC content: 37.95

Gene sequence:

>477_bases
ATGAAATGTCCGTACTGTGGTTATCCTGATTCGAGGGTGATAGATTCACGGCCTACAGACGACAATACCGCTATAAGGAG
AAGAAGAGAATGTCTTAAATGTGGCAAGAGATTTACTACCTATGAGAAGGTAGAGCAACTTCCTATACTTGTGATTAAAA
AAGATAACCGCAGAGAGCTTTACGACAAAGAAAAGATATTAAGAGGGATGATAAAAGCCTGTGAAAAGAGGCCTGTTCCT
ATAAAAGTGCTGGAAGAAATCACTGATGAAATTGACAGGAAGATAGTAAATTCAATGGTTAGGGAAATTACCTCTGCTGA
GATTGGAGAAATGGTGATGGAAAAGTTAAAGAGCGTAGATGAGGTGGCTTATGTGAGGTTTGCGTCTGTCTACAGGCAAT
TTAAGGATATAAACACTTTTATGGATGAGCTAAAAAAACTTCTTAAAGAGAATGAGGAGAAAAAACAGAAGGAGTAA

Upstream 100 bases:

>100_bases
GTAATATTAGTGGATTTTAGGAGTGCCAATGGTTCAGTTTGACTAACAAACTCAAGTTTATTATAATTTTATTAAACGAT
GAATTTTTGGAGGTACAGTC

Downstream 100 bases:

>100_bases
AGCCTATTTGGAGGGGTAAAAATGCCTTATACTGTCCTGGTGATAGAAGATGAGATCCATATCTTAGAGCTATTGAGATA
TAATCTAGAGGCTGCAGGAT

Product: transcriptional regulator NrdR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MKCPYCGYPDSRVIDSRPTDDNTAIRRRRECLKCGKRFTTYEKVEQLPILVIKKDNRRELYDKEKILRGMIKACEKRPVP
IKVLEEITDEIDRKIVNSMVREITSAEIGEMVMEKLKSVDEVAYVRFASVYRQFKDINTFMDELKKLLKENEEKKQKE

Sequences:

>Translated_158_residues
MKCPYCGYPDSRVIDSRPTDDNTAIRRRRECLKCGKRFTTYEKVEQLPILVIKKDNRRELYDKEKILRGMIKACEKRPVP
IKVLEEITDEIDRKIVNSMVREITSAEIGEMVMEKLKSVDEVAYVRFASVYRQFKDINTFMDELKKLLKENEEKKQKE
>Mature_158_residues
MKCPYCGYPDSRVIDSRPTDDNTAIRRRRECLKCGKRFTTYEKVEQLPILVIKKDNRRELYDKEKILRGMIKACEKRPVP
IKVLEEITDEIDRKIVNSMVREITSAEIGEMVMEKLKSVDEVAYVRFASVYRQFKDINTFMDELKKLLKENEEKKQKE

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes [H]

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain [H]

Homologues:

Organism=Escherichia coli, GI1786615, Length=147, Percent_Identity=44.8979591836735, Blast_Score=135, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR003796 [H]

Pfam domain/function: PF03477 ATP-cone [H]

EC number: NA

Molecular weight: Translated: 18786; Mature: 18786

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCPYCGYPDSRVIDSRPTDDNTAIRRRRECLKCGKRFTTYEKVEQLPILVIKKDNRREL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHH
YDKEKILRGMIKACEKRPVPIKVLEEITDEIDRKIVNSMVREITSAEIGEMVMEKLKSVD
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVAYVRFASVYRQFKDINTFMDELKKLLKENEEKKQKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKCPYCGYPDSRVIDSRPTDDNTAIRRRRECLKCGKRFTTYEKVEQLPILVIKKDNRREL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHH
YDKEKILRGMIKACEKRPVPIKVLEEITDEIDRKIVNSMVREITSAEIGEMVMEKLKSVD
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVAYVRFASVYRQFKDINTFMDELKKLLKENEEKKQKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA