| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is BaeS7 [H]
Identifier: 20808059
GI number: 20808059
Start: 1583311
End: 1584681
Strand: Reverse
Name: BaeS7 [H]
Synonym: TTE1632
Alternate gene names: 20808059
Gene position: 1584681-1583311 (Counterclockwise)
Preceding gene: 20808060
Following gene: 20808058
Centisome position: 58.92
GC content: 36.32
Gene sequence:
>1371_bases ATGCTTAGGAAATCTTATTATAGGTTATTTTTTATAAACCTCATAGGGATTTTGACATTGGCTTTATTTTTTTGGGGCAA AGTCTCAATTGAAAATTTGCTCATAGGTGTAGGAATTGCCCTTTTTATCTCTTTTGTTTTAAGTTACAGGTTTTTACGGC GAATAATTGACCCCCTTCAGGAAATTACAGAAGTAACGAAAGACATTGCCAACGGTATATATCACCACGGCATAAAAGAT AATTCGATTGACGAGATAAGGGAACTGTACTTTGCAGTGAGCTCTATGTCTCACAAGTTAAGAGAGACCATCGAGGAATT AAACGATAGAAATGCTACACTAGAAGCTATTTTAAAGAGCATTGCCAATGGAGTTATAGCATTTGATAATGCAGAAAGGA TATTAATGATGAACGATTCGGCAAAAAAAATTTTGGGGATTGAAGAGAAAGATTTGACGGGAAGGCGCGTCTTTGAAGTC ATAAGGAGCAGCAAATTGTATGAGGTTTTTGAAACGTTGAGGAAGAACAAAGTCCTTTCTTCGAAAAGCCTTGAACTTAA CTTTTTCAACAAGCACCTCAAAGTCTATATAAGCCCCATCTTACACCCTGTTTCCCATGTGAATTTAGGTTTTGTTCTGG TAATTGACGACATCACTGAGATGAGGAAATTGGAAAAGATAAGAAGCGAATTTGTAGCAAATGTGTCTCATGAACTCAGA ACTCCTTTGACCTCAATAAGGGGTTTTATTGAAACTCTGAGGAGTGGTGCCATTGAAAACCCAGAGGCAAGAGAAAAATT TCTAGATATAATTGACTTTGAAGCTGAAAGGCTTACAAGACTGATAAATGACATTTTGACTCTTTCTGAGATTGAAAATG TGAAAGAAGGATACCCCGTAGAAAAGATAGAAATGGATAAGGAGATTGAGGACATCCTCTATATAATGGAAAAAGCTGCA AAAGATAAAAGCATAACATTAAAAAGGGACTTAAATTGTGGAAATTTGACTATAATTGCAAACAGGGATCGATTCCACCA GATGATGATTAACCTTATAGATAACGGGATAAAATATACACAAGAAGGCGGCTTTGTTAAGGTGAGTACTAGATTAGAAG GGGAGAAAATAATTATAGAAGTTGAAGATAACGGGATTGGGATACCAAAGGATAAGATTCCGAGGCTTTTTGAGAGATTT TACAGAGTGGATAAAAGTCGCTCGAGAAAGCTTGGAGGTACAGGGCTTGGACTTGCAATTGTTAAGCATATTGTAGAATC GATGAAAGGCGAAATAAGTGTTGAGAGCGAAGTCGGCAAAGGGACAAAGTTTACTATAAGGTTTAACAGAAAGGATTTAA CAAAAACTTAA
Upstream 100 bases:
>100_bases AAGAAGATAGAAGATGACGACAAGGCGCCTGTCTATATTGAGACTGTGCGAGGGATAGGTTACAAACTCAGAGACTTGAG TGAAGACAAAGGTGAAGAAG
Downstream 100 bases:
>100_bases CATTGTCTTAATACAGACTTTACACTAAACTGTTACAATTGACTTGTACAAAATCAAAAAAGTGTGGAGGTGCTTTGATG TTAACCAGTAGATTTGCAAA
Product: sensory transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MLRKSYYRLFFINLIGILTLALFFWGKVSIENLLIGVGIALFISFVLSYRFLRRIIDPLQEITEVTKDIANGIYHHGIKD NSIDEIRELYFAVSSMSHKLRETIEELNDRNATLEAILKSIANGVIAFDNAERILMMNDSAKKILGIEEKDLTGRRVFEV IRSSKLYEVFETLRKNKVLSSKSLELNFFNKHLKVYISPILHPVSHVNLGFVLVIDDITEMRKLEKIRSEFVANVSHELR TPLTSIRGFIETLRSGAIENPEAREKFLDIIDFEAERLTRLINDILTLSEIENVKEGYPVEKIEMDKEIEDILYIMEKAA KDKSITLKRDLNCGNLTIIANRDRFHQMMINLIDNGIKYTQEGGFVKVSTRLEGEKIIIEVEDNGIGIPKDKIPRLFERF YRVDKSRSRKLGGTGLGLAIVKHIVESMKGEISVESEVGKGTKFTIRFNRKDLTKT
Sequences:
>Translated_456_residues MLRKSYYRLFFINLIGILTLALFFWGKVSIENLLIGVGIALFISFVLSYRFLRRIIDPLQEITEVTKDIANGIYHHGIKD NSIDEIRELYFAVSSMSHKLRETIEELNDRNATLEAILKSIANGVIAFDNAERILMMNDSAKKILGIEEKDLTGRRVFEV IRSSKLYEVFETLRKNKVLSSKSLELNFFNKHLKVYISPILHPVSHVNLGFVLVIDDITEMRKLEKIRSEFVANVSHELR TPLTSIRGFIETLRSGAIENPEAREKFLDIIDFEAERLTRLINDILTLSEIENVKEGYPVEKIEMDKEIEDILYIMEKAA KDKSITLKRDLNCGNLTIIANRDRFHQMMINLIDNGIKYTQEGGFVKVSTRLEGEKIIIEVEDNGIGIPKDKIPRLFERF YRVDKSRSRKLGGTGLGLAIVKHIVESMKGEISVESEVGKGTKFTIRFNRKDLTKT >Mature_456_residues MLRKSYYRLFFINLIGILTLALFFWGKVSIENLLIGVGIALFISFVLSYRFLRRIIDPLQEITEVTKDIANGIYHHGIKD NSIDEIRELYFAVSSMSHKLRETIEELNDRNATLEAILKSIANGVIAFDNAERILMMNDSAKKILGIEEKDLTGRRVFEV IRSSKLYEVFETLRKNKVLSSKSLELNFFNKHLKVYISPILHPVSHVNLGFVLVIDDITEMRKLEKIRSEFVANVSHELR TPLTSIRGFIETLRSGAIENPEAREKFLDIIDFEAERLTRLINDILTLSEIENVKEGYPVEKIEMDKEIEDILYIMEKAA KDKSITLKRDLNCGNLTIIANRDRFHQMMINLIDNGIKYTQEGGFVKVSTRLEGEKIIIEVEDNGIGIPKDKIPRLFERF YRVDKSRSRKLGGTGLGLAIVKHIVESMKGEISVESEVGKGTKFTIRFNRKDLTKT
Specific function: Member of the two-component regulatory system phoP/phoR involved in the alkaline phosphatase genes regulation. PhoR may function as a membrane-associated protein kinase that phosphorylates phoP in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=360, Percent_Identity=32.5, Blast_Score=186, Evalue=3e-48, Organism=Escherichia coli, GI1789149, Length=244, Percent_Identity=35.2459016393443, Blast_Score=126, Evalue=3e-30, Organism=Escherichia coli, GI1788549, Length=376, Percent_Identity=25.2659574468085, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI48994928, Length=450, Percent_Identity=27.1111111111111, Blast_Score=123, Evalue=3e-29, Organism=Escherichia coli, GI145693157, Length=228, Percent_Identity=33.7719298245614, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1788393, Length=231, Percent_Identity=30.7359307359307, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI87081816, Length=238, Percent_Identity=33.6134453781513, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1788713, Length=344, Percent_Identity=27.906976744186, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1790436, Length=239, Percent_Identity=30.9623430962343, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI1786783, Length=268, Percent_Identity=30.9701492537313, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1790861, Length=226, Percent_Identity=27.4336283185841, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1790346, Length=229, Percent_Identity=27.9475982532751, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI87082128, Length=234, Percent_Identity=26.9230769230769, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1786912, Length=230, Percent_Identity=28.2608695652174, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1787894, Length=221, Percent_Identity=28.0542986425339, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1789403, Length=196, Percent_Identity=29.0816326530612, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1787374, Length=237, Percent_Identity=26.5822784810127, Blast_Score=85, Evalue=9e-18, Organism=Escherichia coli, GI1789808, Length=221, Percent_Identity=29.8642533936652, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1788279, Length=262, Percent_Identity=28.6259541984733, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1790551, Length=225, Percent_Identity=24.4444444444444, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1790300, Length=358, Percent_Identity=25.1396648044693, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790567, Length=348, Percent_Identity=25.2873563218391, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 52406; Mature: 52406
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKSYYRLFFINLIGILTLALFFWGKVSIENLLIGVGIALFISFVLSYRFLRRIIDPLQ CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EITEVTKDIANGIYHHGIKDNSIDEIRELYFAVSSMSHKLRETIEELNDRNATLEAILKS HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH IANGVIAFDNAERILMMNDSAKKILGIEEKDLTGRRVFEVIRSSKLYEVFETLRKNKVLS HHCCEEEECCCCEEEEECCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC SKSLELNFFNKHLKVYISPILHPVSHVNLGFVLVIDDITEMRKLEKIRSEFVANVSHELR CCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH TPLTSIRGFIETLRSGAIENPEAREKFLDIIDFEAERLTRLINDILTLSEIENVKEGYPV CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC EKIEMDKEIEDILYIMEKAAKDKSITLKRDLNCGNLTIIANRDRFHQMMINLIDNGIKYT HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHCCCCEE QEGGFVKVSTRLEGEKIIIEVEDNGIGIPKDKIPRLFERFYRVDKSRSRKLGGTGLGLAI CCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHH VKHIVESMKGEISVESEVGKGTKFTIRFNRKDLTKT HHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCCCC >Mature Secondary Structure MLRKSYYRLFFINLIGILTLALFFWGKVSIENLLIGVGIALFISFVLSYRFLRRIIDPLQ CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EITEVTKDIANGIYHHGIKDNSIDEIRELYFAVSSMSHKLRETIEELNDRNATLEAILKS HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH IANGVIAFDNAERILMMNDSAKKILGIEEKDLTGRRVFEVIRSSKLYEVFETLRKNKVLS HHCCEEEECCCCEEEEECCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC SKSLELNFFNKHLKVYISPILHPVSHVNLGFVLVIDDITEMRKLEKIRSEFVANVSHELR CCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH TPLTSIRGFIETLRSGAIENPEAREKFLDIIDFEAERLTRLINDILTLSEIENVKEGYPV CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC EKIEMDKEIEDILYIMEKAAKDKSITLKRDLNCGNLTIIANRDRFHQMMINLIDNGIKYT HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHCCCCEE QEGGFVKVSTRLEGEKIIIEVEDNGIGIPKDKIPRLFERFYRVDKSRSRKLGGTGLGLAI CCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHH VKHIVESMKGEISVESEVGKGTKFTIRFNRKDLTKT HHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3142862; 9387221; 9384377 [H]