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The map label for this gene is fliQ [H]

Identifier: 20807872

GI number: 20807872

Start: 1405426

End: 1405695

Strand: Reverse

Name: fliQ [H]

Synonym: TTE1425

Alternate gene names: 20807872

Gene position: 1405695-1405426 (Counterclockwise)

Preceding gene: 20807873

Following gene: 20807871

Centisome position: 52.27

GC content: 41.11

Gene sequence:

>270_bases
ATGTCAAGTAGTATGGCGGTTGACCTTGGAAGAGAGGCTTTATCTGTTGCCTTGACAGTGGCAACTCCTATGCTGGCAGT
AGCCCTTGGAGTTGGACTTCTTATAAGCATTTTTCAAGCAACAACGCAAATTCAGGAGCAGACTTTGTCTTTTGTGCCAA
AAATCGTAGCTGTGCTTTTAAGTTTGATACTGTTTGGACCTTGGATGCTTACTACCCTTGTAAATTACACACAGCGCCTG
TTTCTCAATATAAATAACTTCATAAAGTGA

Upstream 100 bases:

>100_bases
GATATCTCTGCCATTTAAAGTGCTTCTTTTCATTCTTGTAGATGGGTGGAATTTGGTAGTTAAGTCTCTCATTTTAGGTT
TTAGATAAGGGGATGAAAAA

Downstream 100 bases:

>100_bases
TGTGCTATGGATGCGATGAGCTATATTTTGCAGAATGTACAGGTTTTTATATTACTTTTTGTAAGGATGCTAGGAATTTT
TATACTCGCTCCTTTTTTTG

Product: flagellar biosynthesis protein FliQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MSSSMAVDLGREALSVALTVATPMLAVALGVGLLISIFQATTQIQEQTLSFVPKIVAVLLSLILFGPWMLTTLVNYTQRL
FLNINNFIK

Sequences:

>Translated_89_residues
MSSSMAVDLGREALSVALTVATPMLAVALGVGLLISIFQATTQIQEQTLSFVPKIVAVLLSLILFGPWMLTTLVNYTQRL
FLNINNFIK
>Mature_88_residues
SSSMAVDLGREALSVALTVATPMLAVALGVGLLISIFQATTQIQEQTLSFVPKIVAVLLSLILFGPWMLTTLVNYTQRLF
LNINNFIK

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1987

COG function: function code NU; Flagellar biosynthesis pathway, component FliQ

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family [H]

Homologues:

Organism=Escherichia coli, GI1788260, Length=84, Percent_Identity=52.3809523809524, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002191
- InterPro:   IPR006305 [H]

Pfam domain/function: PF01313 Bac_export_3 [H]

EC number: NA

Molecular weight: Translated: 9669; Mature: 9538

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSMAVDLGREALSVALTVATPMLAVALGVGLLISIFQATTQIQEQTLSFVPKIVAVLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLILFGPWMLTTLVNYTQRLFLNINNFIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSSMAVDLGREALSVALTVATPMLAVALGVGLLISIFQATTQIQEQTLSFVPKIVAVLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLILFGPWMLTTLVNYTQRLFLNINNFIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]