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The map label for this gene is fliP [H]

Identifier: 20807873

GI number: 20807873

Start: 1405708

End: 1406373

Strand: Reverse

Name: fliP [H]

Synonym: TTE1426

Alternate gene names: 20807873

Gene position: 1406373-1405708 (Counterclockwise)

Preceding gene: 20807874

Following gene: 20807872

Centisome position: 52.29

GC content: 37.69

Gene sequence:

>666_bases
ATGGATTTAAGTAATTTGGTGTCCTCTGTTACTTCTCCTTCTAATTTATCTACGAGTTTGCAAATTGTACTTTTGCTCAC
AGTTTTGACCCTTGCACCTTCTATACTCATAATGATGACCTCTTTTACGAGAATAGTCATTGTGCTGGCCTTCTTGAGAA
ATGCTTTAGGGCTTCAGCAGATGCCGCCTAATCAGGTGTTGATTGGGTTGGCTTTGTTCCTCACCTTTTACATAATGGCA
CCTGTTGGATATGACATAAACAACAATGCCATAAAACCCTATGTGGAAGGTCAAATAAACCAGTATGAAGCTTATCAGAG
AGCAATCAAACCCCTAAAAAACTTTATGTTAAGGCAGACAAGGCAAAATGACCTTGCGCTTTTTGTGAATCTCGCAAAGA
TTAAAGTAGACAAGGTAGAAGACCTCCCCATGAGAGTTGTAATACCTGCTTTTATAATAAGCGAGTTGAAGACAGCTTTT
GAGATAGGATTTATAATCTACATCCCGTTTTTAGTAATAGATATAATTGTTGCCAGTGTGCTCATGTCAATGGGAATGTT
CATGTTGCCACCTGTTTTGATATCTCTGCCATTTAAAGTGCTTCTTTTCATTCTTGTAGATGGGTGGAATTTGGTAGTTA
AGTCTCTCATTTTAGGTTTTAGATAA

Upstream 100 bases:

>100_bases
GAGAACATGTAAAAATAGAAAAACCAAAGAACTTTGCATCTGAACTAAACTTTTCTCTAGAAAGATTTAGAAACCTTTTT
AAAAAAGATGGTGATAAATG

Downstream 100 bases:

>100_bases
GGGGATGAAAAAATGTCAAGTAGTATGGCGGTTGACCTTGGAAGAGAGGCTTTATCTGTTGCCTTGACAGTGGCAACTCC
TATGCTGGCAGTAGCCCTTG

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MDLSNLVSSVTSPSNLSTSLQIVLLLTVLTLAPSILIMMTSFTRIVIVLAFLRNALGLQQMPPNQVLIGLALFLTFYIMA
PVGYDINNNAIKPYVEGQINQYEAYQRAIKPLKNFMLRQTRQNDLALFVNLAKIKVDKVEDLPMRVVIPAFIISELKTAF
EIGFIIYIPFLVIDIIVASVLMSMGMFMLPPVLISLPFKVLLFILVDGWNLVVKSLILGFR

Sequences:

>Translated_221_residues
MDLSNLVSSVTSPSNLSTSLQIVLLLTVLTLAPSILIMMTSFTRIVIVLAFLRNALGLQQMPPNQVLIGLALFLTFYIMA
PVGYDINNNAIKPYVEGQINQYEAYQRAIKPLKNFMLRQTRQNDLALFVNLAKIKVDKVEDLPMRVVIPAFIISELKTAF
EIGFIIYIPFLVIDIIVASVLMSMGMFMLPPVLISLPFKVLLFILVDGWNLVVKSLILGFR
>Mature_221_residues
MDLSNLVSSVTSPSNLSTSLQIVLLLTVLTLAPSILIMMTSFTRIVIVLAFLRNALGLQQMPPNQVLIGLALFLTFYIMA
PVGYDINNNAIKPYVEGQINQYEAYQRAIKPLKNFMLRQTRQNDLALFVNLAKIKVDKVEDLPMRVVIPAFIISELKTAF
EIGFIIYIPFLVIDIIVASVLMSMGMFMLPPVLISLPFKVLLFILVDGWNLVVKSLILGFR

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=208, Percent_Identity=54.8076923076923, Blast_Score=233, Evalue=1e-62,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 24764; Mature: 24764

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSNLVSSVTSPSNLSTSLQIVLLLTVLTLAPSILIMMTSFTRIVIVLAFLRNALGLQQ
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
MPPNQVLIGLALFLTFYIMAPVGYDINNNAIKPYVEGQINQYEAYQRAIKPLKNFMLRQT
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH
RQNDLALFVNLAKIKVDKVEDLPMRVVIPAFIISELKTAFEIGFIIYIPFLVIDIIVASV
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMSMGMFMLPPVLISLPFKVLLFILVDGWNLVVKSLILGFR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MDLSNLVSSVTSPSNLSTSLQIVLLLTVLTLAPSILIMMTSFTRIVIVLAFLRNALGLQQ
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
MPPNQVLIGLALFLTFYIMAPVGYDINNNAIKPYVEGQINQYEAYQRAIKPLKNFMLRQT
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH
RQNDLALFVNLAKIKVDKVEDLPMRVVIPAFIISELKTAFEIGFIIYIPFLVIDIIVASV
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMSMGMFMLPPVLISLPFKVLLFILVDGWNLVVKSLILGFR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]