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The map label for this gene is yhfA [H]

Identifier: 20807479

GI number: 20807479

Start: 1001778

End: 1003130

Strand: Reverse

Name: yhfA [H]

Synonym: TTE0999

Alternate gene names: 20807479

Gene position: 1003130-1001778 (Counterclockwise)

Preceding gene: 20807481

Following gene: 20807476

Centisome position: 37.3

GC content: 38.36

Gene sequence:

>1353_bases
GTGGAGCTTACAGCATCTCAAATAGCTTACTTTATTGCAATTTTAGTTATACTTATACTTCTTTTAATGAGAAAAGATAT
AATCCTGCCTGTTATCATAGCAATTTTTGCAATTGGGCTTTTGGCTACAAAGGATGTGATAAAAGCAATACAAATAATTT
ACACTGCCATATTGGTTTCAGGAATACGCCTGTGGCACATAATAGTGATAATTTCCCTCATAATAGCTATGTCAAAAGCT
CTGGACGACATAGGAGCAGACGTAATATTGACAAAACCTTTTATAAGGCATCTAAAAAGCCCCACGTATTCTTTCTGGAT
AATAGGTCTGTTTATGATGCTACTTTCTTTTTTCATGTGGCCTGCCCCTGCTGTAGGCCTCATAGGTACAGTATTGATAA
TTCCTTCATTAAAATCAGGCATTGACAAAGTTTCTTTAGCTTCCATAGTGTCCGTTTTTGGATTTGGCATAGCGCTTTCA
GGAGATTTCTTTATACAGGGTGCTCCTTCAATAACAGCAAAAGCAGCGGGAATAAATACGCATCAGCTGGTTCAGAATAT
TCTGCCAATTTGGGCAGTATCTTCTGTCGTAGCTAGTGTATCTTTATATTTTTGTGTTCTTTATACATCAAAACACCATC
CACCTTCAGAATACGTAGAGACAAAACCGATCCACGGGAGACCAGTTTCATTTAAAAGTTATACAGTATCAGTAATAGCA
GTAGTGCTCTTTTTGATAGACGTTCTCATAATGATACTTTTTAAAATCCATTCCAGCGGAGCCACTGCCTTAATAGGTGG
AACAGCCATAATTGTTTTAATAGCTTCTGCAGCAATTCAAGAAAATTTTCTGGATAAAACAAGAGATTACTTAAGAGAAG
GTTTTTTAAACGGCATGAGGACCTTTGCCCCCGTTATAATAATAAGTGCATTCTTTCTGTTGGGAGAAACCAGTATGGCA
AAGCAAGTAATAGGTCCTCATGCAAGAGGATATCTTGTAGACCTTGGAACTTACCTATCTCATCATATACCTCTTAATAA
ATACACTGCTTCCCTTTTGGAACTGGCAATGGGAATTCTCACGGGAATGTCTGGCTCGGGATTTTCAGGCCTTCCTTTAA
TAGGCGCTTTAGCAAAGACTTTTTCCTCAGCAGCTTTCCTCAACCCAGCTTTATTAGCTTCTATAGGACAGTTAGCTGCA
GTCTGGACAGGAGGGGGTACATTAATACCCTGGAGCACAGCCGTAGTGTCAGCTGTAATAGATGTTGACTCCAGAAAAAT
ATCTAAGAGAAATTTTATACCTGCAGTACTGGGGCTTATCTCAGCTTACATTGTAACAGTCATACTTTTATAA

Upstream 100 bases:

>100_bases
ATATTGCCATAATTTCAATTTAAAACCTAAATACTCCAGTATAAAAATGCAGAAAATTAGCTACCATATAAACTGTAAAA
AAGAAAGGGAGTGAAAAAGT

Downstream 100 bases:

>100_bases
AAACTAGCCTGTTGATGAAGTATCAACAAATTAAGCCGAGGTAAAAAATACCTCGGCTTTCAAGATATCCCCCTCATTAT
CAGGTTCATCATGCTGTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MELTASQIAYFIAILVILILLLMRKDIILPVIIAIFAIGLLATKDVIKAIQIIYTAILVSGIRLWHIIVIISLIIAMSKA
LDDIGADVILTKPFIRHLKSPTYSFWIIGLFMMLLSFFMWPAPAVGLIGTVLIIPSLKSGIDKVSLASIVSVFGFGIALS
GDFFIQGAPSITAKAAGINTHQLVQNILPIWAVSSVVASVSLYFCVLYTSKHHPPSEYVETKPIHGRPVSFKSYTVSVIA
VVLFLIDVLIMILFKIHSSGATALIGGTAIIVLIASAAIQENFLDKTRDYLREGFLNGMRTFAPVIIISAFFLLGETSMA
KQVIGPHARGYLVDLGTYLSHHIPLNKYTASLLELAMGILTGMSGSGFSGLPLIGALAKTFSSAAFLNPALLASIGQLAA
VWTGGGTLIPWSTAVVSAVIDVDSRKISKRNFIPAVLGLISAYIVTVILL

Sequences:

>Translated_450_residues
MELTASQIAYFIAILVILILLLMRKDIILPVIIAIFAIGLLATKDVIKAIQIIYTAILVSGIRLWHIIVIISLIIAMSKA
LDDIGADVILTKPFIRHLKSPTYSFWIIGLFMMLLSFFMWPAPAVGLIGTVLIIPSLKSGIDKVSLASIVSVFGFGIALS
GDFFIQGAPSITAKAAGINTHQLVQNILPIWAVSSVVASVSLYFCVLYTSKHHPPSEYVETKPIHGRPVSFKSYTVSVIA
VVLFLIDVLIMILFKIHSSGATALIGGTAIIVLIASAAIQENFLDKTRDYLREGFLNGMRTFAPVIIISAFFLLGETSMA
KQVIGPHARGYLVDLGTYLSHHIPLNKYTASLLELAMGILTGMSGSGFSGLPLIGALAKTFSSAAFLNPALLASIGQLAA
VWTGGGTLIPWSTAVVSAVIDVDSRKISKRNFIPAVLGLISAYIVTVILL
>Mature_450_residues
MELTASQIAYFIAILVILILLLMRKDIILPVIIAIFAIGLLATKDVIKAIQIIYTAILVSGIRLWHIIVIISLIIAMSKA
LDDIGADVILTKPFIRHLKSPTYSFWIIGLFMMLLSFFMWPAPAVGLIGTVLIIPSLKSGIDKVSLASIVSVFGFGIALS
GDFFIQGAPSITAKAAGINTHQLVQNILPIWAVSSVVASVSLYFCVLYTSKHHPPSEYVETKPIHGRPVSFKSYTVSVIA
VVLFLIDVLIMILFKIHSSGATALIGGTAIIVLIASAAIQENFLDKTRDYLREGFLNGMRTFAPVIIISAFFLLGETSMA
KQVIGPHARGYLVDLGTYLSHHIPLNKYTASLLELAMGILTGMSGSGFSGLPLIGALAKTFSSAAFLNPALLASIGQLAA
VWTGGGTLIPWSTAVVSAVIDVDSRKISKRNFIPAVLGLISAYIVTVILL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48247; Mature: 48247

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTASQIAYFIAILVILILLLMRKDIILPVIIAIFAIGLLATKDVIKAIQIIYTAILVS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIRLWHIIVIISLIIAMSKALDDIGADVILTKPFIRHLKSPTYSFWIIGLFMMLLSFFMW
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
PAPAVGLIGTVLIIPSLKSGIDKVSLASIVSVFGFGIALSGDFFIQGAPSITAKAAGINT
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCH
HQLVQNILPIWAVSSVVASVSLYFCVLYTSKHHPPSEYVETKPIHGRPVSFKSYTVSVIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHH
VVLFLIDVLIMILFKIHSSGATALIGGTAIIVLIASAAIQENFLDKTRDYLREGFLNGMR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFAPVIIISAFFLLGETSMAKQVIGPHARGYLVDLGTYLSHHIPLNKYTASLLELAMGIL
HHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
TGMSGSGFSGLPLIGALAKTFSSAAFLNPALLASIGQLAAVWTGGGTLIPWSTAVVSAVI
HCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHH
DVDSRKISKRNFIPAVLGLISAYIVTVILL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MELTASQIAYFIAILVILILLLMRKDIILPVIIAIFAIGLLATKDVIKAIQIIYTAILVS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIRLWHIIVIISLIIAMSKALDDIGADVILTKPFIRHLKSPTYSFWIIGLFMMLLSFFMW
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
PAPAVGLIGTVLIIPSLKSGIDKVSLASIVSVFGFGIALSGDFFIQGAPSITAKAAGINT
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCH
HQLVQNILPIWAVSSVVASVSLYFCVLYTSKHHPPSEYVETKPIHGRPVSFKSYTVSVIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHH
VVLFLIDVLIMILFKIHSSGATALIGGTAIIVLIASAAIQENFLDKTRDYLREGFLNGMR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFAPVIIISAFFLLGETSMAKQVIGPHARGYLVDLGTYLSHHIPLNKYTASLLELAMGIL
HHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
TGMSGSGFSGLPLIGALAKTFSSAAFLNPALLASIGQLAAVWTGGGTLIPWSTAVVSAVI
HCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHH
DVDSRKISKRNFIPAVLGLISAYIVTVILL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]