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The map label for this gene is OppA5 [H]

Identifier: 20807104

GI number: 20807104

Start: 613381

End: 615030

Strand: Direct

Name: OppA5 [H]

Synonym: TTE0609

Alternate gene names: 20807104

Gene position: 613381-615030 (Clockwise)

Preceding gene: 20807103

Following gene: 20807106

Centisome position: 22.81

GC content: 40.42

Gene sequence:

>1650_bases
ATGAGTAAAAGAATTTTAGTGTTGGCATTTGCTGTTTTATTTATCGTCTCTTCAGTTTTGTTTATAGGATGTTCTAAACA
ATCGACAGCACCTTTAGAGACTTCTTCGAAACAGCTCACAGATGAGCAGGTTTTAAACATCAATCTCGGTGAGGAACCGC
CAAACCTTGACCCTCAAAAGGCTACAGACGTTGTATCTTTTGACGTTTTAAATGCTACATTAGAAGGATTGGTTAGACTC
AACAAGGAAGGAAAAGTTGAGAAAGGATCAGGACTTGCACTTGATTGGGAGATTTCACCAGATGGACTAAGGTATGTTTT
CCACTTGAGAGATGCAAAGTGGAGCGATGGGACTCCAATTACCGCTCACGATTTTGAATATGCCTGGAAAAGAGCTTTAG
ACCCTGCAACGGGTTCTCAGTATGCTTACATGCTTTTCTACTTGAAGAATGGTGAAGCCTTTAACGCAGGAAAAGCAAAG
GCTGAGGATGTAGGAGTTAAAGCTTTAGACGATAAAACGCTGGAGGTCATACTTGAGAGGCCAGCACCTCAATTCCTAGG
CTTGACTGCGTTTGGAACATATTTGCCGGCACAGAAGGCAGCAATTGAAAAGTTTGGAGATAAATACGGCAGCTCACCTG
ACACAATGGTTTATTCAGGGCCTTTCATAGTAAAAGAGTGGAACCACGAACAGAATATAGTGCTGGAGAAAAACCCCTAT
TATTGGGATAAAGACAATGTAAAGCTTGAGAGAATAAATATGGACATGTTAAAAGATGAAAATGCTATAGTGCAGAAGTA
TGAAGCTGGAGAATACGATGCAATAGGTGTTCCAGGACAGTACATTGACAAGTACAAAAACGATCCTAATTTCCATCAAA
TGGCGGAAGCTACAACCTTCTATTTGCAATTTAACAATGAAACTGGTGTATTTACAAATGTTAACATGAGAAAAGCTTTC
ACTTACGCTATAGACAGAAAATCTTTTGTTGACAATGTTCTGAAAAACGGTTCTATACCGGCTCTTGCACTTGTGCCTCC
TGGAATACCAGGAGAGAAGGAGGAATTTAGAAAAGAAGGCGGCGATTACTTCAAAGACAATGATGTAGCAAAAGCAAAAG
AATTATTTGAAAAGGGTATGAAAGAATTAGGGCTCACCAAATTCCCTGAGATAAAATTTGTAGCAGGAGATAGTGACGCT
GCGAAGAAACATTCCCAGGTATTGCAGGAGTTCTGGAATAAGAATTTAGGAGTCAAAGTGAACATCCTAAACGTTGCTTT
CAAAGTAAGACTTGACATGATGGACAAAGGGGATTTTGACATAGTATATGCAGGATGGGGAGCTGACTACAACGACCCGA
TGACTTTTCTTGATTTGTGGGTAACAGGCGGTGGTAACAACTCTGCCCGCTATAGCAATCCAAAATATGATGAGCTCATA
AAGAAGGCAAACTCTACAAATGATAATGCTGTAAGAATGCAGGCAATGCACGAAGCAGAAAAACTCTTGATGGAAGATAT
GCCTATAGGACCTCTCTACTTCAGAGGAAGAGCATATCTACAAAGACCATATGTTCACGACTGGGTGAGGTTCCCGGTAG
GTGTTTCCAACGAATGGAAGTGGACTTACATTGAAGGGAAAAACAAATAA

Upstream 100 bases:

>100_bases
TTTTACTGGGGGTGGTGAGAAAAATTTTATTAAAATTTTACTTTTTAGAGTTAGGGGGAGAAATTTTTTAAATAAAAAAT
AAAAAGAGGGAGGCCTTTTG

Downstream 100 bases:

>100_bases
GAAGTAATTTAGCCAGGTCCAGAGGACCTGGCTAAATTTTTATACAATTCAACAAGAATTTTAGATATTACAAAATATTT
TCTTGATTTAGCAAAGGCAA

Product: ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KA [H]

Number of amino acids: Translated: 549; Mature: 548

Protein sequence:

>549_residues
MSKRILVLAFAVLFIVSSVLFIGCSKQSTAPLETSSKQLTDEQVLNINLGEEPPNLDPQKATDVVSFDVLNATLEGLVRL
NKEGKVEKGSGLALDWEISPDGLRYVFHLRDAKWSDGTPITAHDFEYAWKRALDPATGSQYAYMLFYLKNGEAFNAGKAK
AEDVGVKALDDKTLEVILERPAPQFLGLTAFGTYLPAQKAAIEKFGDKYGSSPDTMVYSGPFIVKEWNHEQNIVLEKNPY
YWDKDNVKLERINMDMLKDENAIVQKYEAGEYDAIGVPGQYIDKYKNDPNFHQMAEATTFYLQFNNETGVFTNVNMRKAF
TYAIDRKSFVDNVLKNGSIPALALVPPGIPGEKEEFRKEGGDYFKDNDVAKAKELFEKGMKELGLTKFPEIKFVAGDSDA
AKKHSQVLQEFWNKNLGVKVNILNVAFKVRLDMMDKGDFDIVYAGWGADYNDPMTFLDLWVTGGGNNSARYSNPKYDELI
KKANSTNDNAVRMQAMHEAEKLLMEDMPIGPLYFRGRAYLQRPYVHDWVRFPVGVSNEWKWTYIEGKNK

Sequences:

>Translated_549_residues
MSKRILVLAFAVLFIVSSVLFIGCSKQSTAPLETSSKQLTDEQVLNINLGEEPPNLDPQKATDVVSFDVLNATLEGLVRL
NKEGKVEKGSGLALDWEISPDGLRYVFHLRDAKWSDGTPITAHDFEYAWKRALDPATGSQYAYMLFYLKNGEAFNAGKAK
AEDVGVKALDDKTLEVILERPAPQFLGLTAFGTYLPAQKAAIEKFGDKYGSSPDTMVYSGPFIVKEWNHEQNIVLEKNPY
YWDKDNVKLERINMDMLKDENAIVQKYEAGEYDAIGVPGQYIDKYKNDPNFHQMAEATTFYLQFNNETGVFTNVNMRKAF
TYAIDRKSFVDNVLKNGSIPALALVPPGIPGEKEEFRKEGGDYFKDNDVAKAKELFEKGMKELGLTKFPEIKFVAGDSDA
AKKHSQVLQEFWNKNLGVKVNILNVAFKVRLDMMDKGDFDIVYAGWGADYNDPMTFLDLWVTGGGNNSARYSNPKYDELI
KKANSTNDNAVRMQAMHEAEKLLMEDMPIGPLYFRGRAYLQRPYVHDWVRFPVGVSNEWKWTYIEGKNK
>Mature_548_residues
SKRILVLAFAVLFIVSSVLFIGCSKQSTAPLETSSKQLTDEQVLNINLGEEPPNLDPQKATDVVSFDVLNATLEGLVRLN
KEGKVEKGSGLALDWEISPDGLRYVFHLRDAKWSDGTPITAHDFEYAWKRALDPATGSQYAYMLFYLKNGEAFNAGKAKA
EDVGVKALDDKTLEVILERPAPQFLGLTAFGTYLPAQKAAIEKFGDKYGSSPDTMVYSGPFIVKEWNHEQNIVLEKNPYY
WDKDNVKLERINMDMLKDENAIVQKYEAGEYDAIGVPGQYIDKYKNDPNFHQMAEATTFYLQFNNETGVFTNVNMRKAFT
YAIDRKSFVDNVLKNGSIPALALVPPGIPGEKEEFRKEGGDYFKDNDVAKAKELFEKGMKELGLTKFPEIKFVAGDSDAA
KKHSQVLQEFWNKNLGVKVNILNVAFKVRLDMMDKGDFDIVYAGWGADYNDPMTFLDLWVTGGGNNSARYSNPKYDELIK
KANSTNDNAVRMQAMHEAEKLLMEDMPIGPLYFRGRAYLQRPYVHDWVRFPVGVSNEWKWTYIEGKNK

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, It binds peptides up to five amino acids long with high affinity. Also required for sporulation and competence [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787495, Length=500, Percent_Identity=35.2, Blast_Score=269, Evalue=4e-73,
Organism=Escherichia coli, GI87081878, Length=520, Percent_Identity=31.5384615384615, Blast_Score=258, Evalue=1e-69,
Organism=Escherichia coli, GI1789397, Length=516, Percent_Identity=33.3333333333333, Blast_Score=253, Evalue=3e-68,
Organism=Escherichia coli, GI1787762, Length=479, Percent_Identity=25.4697286012526, Blast_Score=130, Evalue=3e-31,
Organism=Escherichia coli, GI1789966, Length=486, Percent_Identity=25.3086419753086, Blast_Score=119, Evalue=7e-28,
Organism=Escherichia coli, GI1787052, Length=490, Percent_Identity=25.7142857142857, Blast_Score=119, Evalue=7e-28,
Organism=Escherichia coli, GI1787551, Length=456, Percent_Identity=23.0263157894737, Blast_Score=92, Evalue=9e-20,
Organism=Escherichia coli, GI1789887, Length=453, Percent_Identity=24.0618101545254, Blast_Score=73, Evalue=5e-14,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 62083; Mature: 61952

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRILVLAFAVLFIVSSVLFIGCSKQSTAPLETSSKQLTDEQVLNINLGEEPPNLDPQK
CCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHCCCCEEEEEECCCCCCCCCCHH
ATDVVSFDVLNATLEGLVRLNKEGKVEKGSGLALDWEISPDGLRYVFHLRDAKWSDGTPI
HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCE
TAHDFEYAWKRALDPATGSQYAYMLFYLKNGEAFNAGKAKAEDVGVKALDDKTLEVILER
EECCHHHHHHHHCCCCCCCCEEEEEEEEECCCEECCCCCCHHHCCCEEECCCHHHHEECC
PAPQFLGLTAFGTYLPAQKAAIEKFGDKYGSSPDTMVYSGPFIVKEWNHEQNIVLEKNPY
CCCHHCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCCCCCEEECCCCC
YWDKDNVKLERINMDMLKDENAIVQKYEAGEYDAIGVPGQYIDKYKNDPNFHQMAEATTF
EECCCCCEEEEECHHHHCCCCHHHEEECCCCCCEECCCHHHHHHCCCCCCHHHHHCEEEE
YLQFNNETGVFTNVNMRKAFTYAIDRKSFVDNVLKNGSIPALALVPPGIPGEKEEFRKEG
EEEECCCCCEEEECCHHHEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHCC
GDYFKDNDVAKAKELFEKGMKELGLTKFPEIKFVAGDSDAAKKHSQVLQEFWNKNLGVKV
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEE
NILNVAFKVRLDMMDKGDFDIVYAGWGADYNDPMTFLDLWVTGGGNNSARYSNPKYDELI
EEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHH
KKANSTNDNAVRMQAMHEAEKLLMEDMPIGPLYFRGRAYLQRPYVHDWVRFPVGVSNEWK
HHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCCHHHHHHCCCCCCCCEE
WTYIEGKNK
EEEEECCCC
>Mature Secondary Structure 
SKRILVLAFAVLFIVSSVLFIGCSKQSTAPLETSSKQLTDEQVLNINLGEEPPNLDPQK
CCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHCCCCEEEEEECCCCCCCCCCHH
ATDVVSFDVLNATLEGLVRLNKEGKVEKGSGLALDWEISPDGLRYVFHLRDAKWSDGTPI
HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCE
TAHDFEYAWKRALDPATGSQYAYMLFYLKNGEAFNAGKAKAEDVGVKALDDKTLEVILER
EECCHHHHHHHHCCCCCCCCEEEEEEEEECCCEECCCCCCHHHCCCEEECCCHHHHEECC
PAPQFLGLTAFGTYLPAQKAAIEKFGDKYGSSPDTMVYSGPFIVKEWNHEQNIVLEKNPY
CCCHHCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCCCCCEEECCCCC
YWDKDNVKLERINMDMLKDENAIVQKYEAGEYDAIGVPGQYIDKYKNDPNFHQMAEATTF
EECCCCCEEEEECHHHHCCCCHHHEEECCCCCCEECCCHHHHHHCCCCCCHHHHHCEEEE
YLQFNNETGVFTNVNMRKAFTYAIDRKSFVDNVLKNGSIPALALVPPGIPGEKEEFRKEG
EEEECCCCCEEEECCHHHEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHCC
GDYFKDNDVAKAKELFEKGMKELGLTKFPEIKFVAGDSDAAKKHSQVLQEFWNKNLGVKV
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEE
NILNVAFKVRLDMMDKGDFDIVYAGWGADYNDPMTFLDLWVTGGGNNSARYSNPKYDELI
EEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHH
KKANSTNDNAVRMQAMHEAEKLLMEDMPIGPLYFRGRAYLQRPYVHDWVRFPVGVSNEWK
HHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCCHHHHHHCCCCCCCCEE
WTYIEGKNK
EEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]