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The map label for this gene is LytS [H]

Identifier: 20806808

GI number: 20806808

Start: 300338

End: 301819

Strand: Direct

Name: LytS [H]

Synonym: TTE0287

Alternate gene names: 20806808

Gene position: 300338-301819 (Clockwise)

Preceding gene: 20806807

Following gene: 20806809

Centisome position: 11.17

GC content: 33.67

Gene sequence:

>1482_bases
ATGCTTAGAGACTTGTGGAAAGCAGGAGGAATTCGCAAAAAGCTGATAATTTATTATCTTATTGTAACTGTCTTGATGGG
TATGACCAGCTTTTATTCTTATTACAACGCTAAGGTAGCTATAGAAAAGCTTAAATCGATCTTCGTAGATTATGTGTATT
TGAACAATTTAAATTCAGATGTAAATATGCTGGAAACGGAAGTAGAAAGATATCTTGCCACAAAATCCTCTGATGCGCTT
TTAAATTACTACTCTTTGTACAATAAATTAGAAAACAAGGCCTCTGATATATTAAGTCAGAATTACTATGATACAGATAG
CCTTATGCTTAAGGATATAGCTAATATGATTAATAAACTCCTTGAAGAGGCAGATGCGGCTGTAAACGCTAAGAGAGGGA
GGATTACTAGTGAATATATTGACCATTTCACAAAATCCATTAAAATAAGCGATTATATAAAATTTTATATGACAAATCTT
TTAAATAACAAGTTGCAGGAAGGGTCAGCAAAATATGCTTCAATTACAAAGAATATGGAGTATCTGAGCTATTTGAATAT
ATTCTTAATCTTAATCTCTATTGGGTTTAGTATATTCCTGGCTTTTTTGTTCACATATAAGATTACAAAACCTATCATTG
ATTTATCCCACCTTGCTGTAAGGGTATCAAAAGGAGATTTTGAAGTGAGGCCTATTGAACTTAAAACAAACGATGAGATA
AAAGTGCTGTCTGAAGCCTTCAACAAAATGGTAGTTAACATAAAAAAGTATATAGGTGAGATAAAGAAACAGGCTGAGAT
GGAGAGGAAGATAAAAGAGGCAGAGCTAAAAGCCCTTCAATCTCAGATAAATCCTCATTTTCTCTTCAATACTTTAAATG
CTGCTGCCCAACTTGCCATGATGGAAGGTGCAGAAAAATCGGCCGAATTCATAGAAAATGTGGCTAATCTTTTTAGGTAT
AATTTGAAAAAGCTGGATTCTACTGTGACTTTAAAAGACGAAATAGAAAATGTCAAGCGTTATATTTACATTTTAAAGAC
TCGCTTTGGAGATAAGATAGATTTTAAATTGGATGTAGAAGAAGAGGTTTTAGATTTGGAAATGCCATGCATGATACTTC
AGCCTGTGGTAGAGAATGCCTTTATCCATGGATTAGAGGATGTAGAAAGAGACGGATTAATTGTTTTAAAGGCTTATAAA
GAAGGTGAAAAAGTGCTGGTAGAAATTGCTGACAATGGTGTAGGAATGGAGCAGGAAAAGATAAAGGCTATTCTGGCGCT
TGATAGTCCTGATGTAGATAAAAAGCATGTTACAGGTATTGGCATGCACAATATAATACACAGATTGCTTGTTTTTTATG
ACATATCTAGTGTAGAAGATGTTATCGAGATAAAAAGTGAGATAGGGAAAGGCACCAAAGTCACTTTAAAAATTCCTGAT
AAAAAGGGTGAAAGGAATTATGGTCAAGTTGTTAATAGCTGA

Upstream 100 bases:

>100_bases
GTCTCTACTTTTGTAGACATTGGAGTGAATGTCATTACTAAAGAAAATGTTAACGAATATTTCAAGAGAATCCAATCACT
AGACTGAGAAGGTGCAAAAG

Downstream 100 bases:

>100_bases
CGATGAGCAGATAGTCCTTGATTCTATTAAGTTTATAATAGAAAAAAACAATGTACAGGCTGAAATTGTGGGCACAGCTA
AGTCTGGCAGGGAAGCTATA

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MLRDLWKAGGIRKKLIIYYLIVTVLMGMTSFYSYYNAKVAIEKLKSIFVDYVYLNNLNSDVNMLETEVERYLATKSSDAL
LNYYSLYNKLENKASDILSQNYYDTDSLMLKDIANMINKLLEEADAAVNAKRGRITSEYIDHFTKSIKISDYIKFYMTNL
LNNKLQEGSAKYASITKNMEYLSYLNIFLILISIGFSIFLAFLFTYKITKPIIDLSHLAVRVSKGDFEVRPIELKTNDEI
KVLSEAFNKMVVNIKKYIGEIKKQAEMERKIKEAELKALQSQINPHFLFNTLNAAAQLAMMEGAEKSAEFIENVANLFRY
NLKKLDSTVTLKDEIENVKRYIYILKTRFGDKIDFKLDVEEEVLDLEMPCMILQPVVENAFIHGLEDVERDGLIVLKAYK
EGEKVLVEIADNGVGMEQEKIKAILALDSPDVDKKHVTGIGMHNIIHRLLVFYDISSVEDVIEIKSEIGKGTKVTLKIPD
KKGERNYGQVVNS

Sequences:

>Translated_493_residues
MLRDLWKAGGIRKKLIIYYLIVTVLMGMTSFYSYYNAKVAIEKLKSIFVDYVYLNNLNSDVNMLETEVERYLATKSSDAL
LNYYSLYNKLENKASDILSQNYYDTDSLMLKDIANMINKLLEEADAAVNAKRGRITSEYIDHFTKSIKISDYIKFYMTNL
LNNKLQEGSAKYASITKNMEYLSYLNIFLILISIGFSIFLAFLFTYKITKPIIDLSHLAVRVSKGDFEVRPIELKTNDEI
KVLSEAFNKMVVNIKKYIGEIKKQAEMERKIKEAELKALQSQINPHFLFNTLNAAAQLAMMEGAEKSAEFIENVANLFRY
NLKKLDSTVTLKDEIENVKRYIYILKTRFGDKIDFKLDVEEEVLDLEMPCMILQPVVENAFIHGLEDVERDGLIVLKAYK
EGEKVLVEIADNGVGMEQEKIKAILALDSPDVDKKHVTGIGMHNIIHRLLVFYDISSVEDVIEIKSEIGKGTKVTLKIPD
KKGERNYGQVVNS
>Mature_493_residues
MLRDLWKAGGIRKKLIIYYLIVTVLMGMTSFYSYYNAKVAIEKLKSIFVDYVYLNNLNSDVNMLETEVERYLATKSSDAL
LNYYSLYNKLENKASDILSQNYYDTDSLMLKDIANMINKLLEEADAAVNAKRGRITSEYIDHFTKSIKISDYIKFYMTNL
LNNKLQEGSAKYASITKNMEYLSYLNIFLILISIGFSIFLAFLFTYKITKPIIDLSHLAVRVSKGDFEVRPIELKTNDEI
KVLSEAFNKMVVNIKKYIGEIKKQAEMERKIKEAELKALQSQINPHFLFNTLNAAAQLAMMEGAEKSAEFIENVANLFRY
NLKKLDSTVTLKDEIENVKRYIYILKTRFGDKIDFKLDVEEEVLDLEMPCMILQPVVENAFIHGLEDVERDGLIVLKAYK
EGEKVLVEIADNGVGMEQEKIKAILALDSPDVDKKHVTGIGMHNIIHRLLVFYDISSVEDVIEIKSEIGKGTKVTLKIPD
KKGERNYGQVVNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788723, Length=244, Percent_Identity=29.9180327868852, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1788446, Length=249, Percent_Identity=30.9236947791165, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR010559
- InterPro:   IPR011620 [H]

Pfam domain/function: PF07694 5TM-5TMR_LYT; PF02518 HATPase_c; PF06580 His_kinase [H]

EC number: NA

Molecular weight: Translated: 56523; Mature: 56523

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS50885 HAMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRDLWKAGGIRKKLIIYYLIVTVLMGMTSFYSYYNAKVAIEKLKSIFVDYVYLNNLNSD
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
VNMLETEVERYLATKSSDALLNYYSLYNKLENKASDILSQNYYDTDSLMLKDIANMINKL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LEEADAAVNAKRGRITSEYIDHFTKSIKISDYIKFYMTNLLNNKLQEGSAKYASITKNME
HHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
YLSYLNIFLILISIGFSIFLAFLFTYKITKPIIDLSHLAVRVSKGDFEVRPIELKTNDEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCHH
KVLSEAFNKMVVNIKKYIGEIKKQAEMERKIKEAELKALQSQINPHFLFNTLNAAAQLAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
MEGAEKSAEFIENVANLFRYNLKKLDSTVTLKDEIENVKRYIYILKTRFGDKIDFKLDVE
HHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCH
EEVLDLEMPCMILQPVVENAFIHGLEDVERDGLIVLKAYKEGEKVLVEIADNGVGMEQEK
HHHHCCCCCHHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHH
IKAILALDSPDVDKKHVTGIGMHNIIHRLLVFYDISSVEDVIEIKSEIGKGTKVTLKIPD
HHEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
KKGERNYGQVVNS
CCCCCCHHHCCCC
>Mature Secondary Structure
MLRDLWKAGGIRKKLIIYYLIVTVLMGMTSFYSYYNAKVAIEKLKSIFVDYVYLNNLNSD
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
VNMLETEVERYLATKSSDALLNYYSLYNKLENKASDILSQNYYDTDSLMLKDIANMINKL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LEEADAAVNAKRGRITSEYIDHFTKSIKISDYIKFYMTNLLNNKLQEGSAKYASITKNME
HHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
YLSYLNIFLILISIGFSIFLAFLFTYKITKPIIDLSHLAVRVSKGDFEVRPIELKTNDEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCHH
KVLSEAFNKMVVNIKKYIGEIKKQAEMERKIKEAELKALQSQINPHFLFNTLNAAAQLAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
MEGAEKSAEFIENVANLFRYNLKKLDSTVTLKDEIENVKRYIYILKTRFGDKIDFKLDVE
HHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCH
EEVLDLEMPCMILQPVVENAFIHGLEDVERDGLIVLKAYKEGEKVLVEIADNGVGMEQEK
HHHHCCCCCHHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHH
IKAILALDSPDVDKKHVTGIGMHNIIHRLLVFYDISSVEDVIEIKSEIGKGTKVTLKIPD
HHEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
KKGERNYGQVVNS
CCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]