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The map label for this gene is RbsB2 [H]

Identifier: 20806807

GI number: 20806807

Start: 299317

End: 300324

Strand: Direct

Name: RbsB2 [H]

Synonym: TTE0286

Alternate gene names: 20806807

Gene position: 299317-300324 (Clockwise)

Preceding gene: 20806806

Following gene: 20806808

Centisome position: 11.13

GC content: 36.31

Gene sequence:

>1008_bases
ATGAAAACGTTAAAAGAGAAATTTTTTAAATTACTTGACAAAGTGATAATAGTATCAATTATCGCCATTTCTATTTCAGC
CTTTTTGCTGTATAAATTTCAGACTGCTCAAAAGCCTATATTTGCCAAAGTACCTGAATATCATTTCTACATGGTGGGAC
AAAATTCAGTAGATCCTTTCTGGAAGGAAATAAAAATGGGAGCGATGGAGGCGGCTAAGTACTACAATGTGGCACTTGAG
TTCAATGCTCCCAAGTTCAATAACATACAAGAAGAGCTTAAGTACTTGGAAATTGCTATATTTTCAAAAGTTGACGGAAT
AATTACCCATGTTGCTAACAATGAAGAGTTTGTAAATTTAATTGAAGAGGCCTATAAAGAGGGTATTCCTGTTATCACAG
TGGAAAACGATGCGAAGGACAGCAAAAGGCAAGCTTTTATAGGCACGAACAGCTTTCATCTGGGAGAAGAAGCTGCAAGA
CTTATGGCAAAGGCGACAAAGGGAAAAGCCAACATAGCCATAATTGTCAGCAATGACTATCAGTTGGATAGTGTCAATCA
AAATCTTAAGATTAACGGCTTTCTGGACGCAATAAAGAACTATCCGGAAATGAAAGTGGTTAGAGTTTATACATCAAAAC
TCGGGACCTTGAGTGCAGAAGAGATTACTCAATCTATTATAAGCGGAAAGGATAAGATAAACGCTATATATGTGACAGAT
TCTGTTGATACAATTGGCACAGCTCAAGTGGTTGTAGATTTTAACAAGGTAGGAGAGATTACTGTGGTGGGATACGGCGA
TACTCCAGATATTTTAAGATACATTGAAAAAGGCGTTATATACGGGACAGTTATGAGCGACCCTTATAAAATAGGGTATG
AAAGTATAAAGGCGATGGTGGAGTTTAAGAAAAAAAATACAGTCTCTACTTTTGTAGACATTGGAGTGAATGTCATTACT
AAAGAAAATGTTAACGAATATTTCAAGAGAATCCAATCACTAGACTGA

Upstream 100 bases:

>100_bases
CGCACCTTTTTTAATTTAACAGATTTTTAGCGTTGATATACCGAAAAAGATGGTTTATCATTATATCAAAGGACAATTGC
GAAGGGAAGGAAGTAATTTC

Downstream 100 bases:

>100_bases
GAAGGTGCAAAAGATGCTTAGAGACTTGTGGAAAGCAGGAGGAATTCGCAAAAAGCTGATAATTTATTATCTTATTGTAA
CTGTCTTGATGGGTATGACC

Product: periplasmic sugar-binding proteins

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: ALBP [H]

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MKTLKEKFFKLLDKVIIVSIIAISISAFLLYKFQTAQKPIFAKVPEYHFYMVGQNSVDPFWKEIKMGAMEAAKYYNVALE
FNAPKFNNIQEELKYLEIAIFSKVDGIITHVANNEEFVNLIEEAYKEGIPVITVENDAKDSKRQAFIGTNSFHLGEEAAR
LMAKATKGKANIAIIVSNDYQLDSVNQNLKINGFLDAIKNYPEMKVVRVYTSKLGTLSAEEITQSIISGKDKINAIYVTD
SVDTIGTAQVVVDFNKVGEITVVGYGDTPDILRYIEKGVIYGTVMSDPYKIGYESIKAMVEFKKKNTVSTFVDIGVNVIT
KENVNEYFKRIQSLD

Sequences:

>Translated_335_residues
MKTLKEKFFKLLDKVIIVSIIAISISAFLLYKFQTAQKPIFAKVPEYHFYMVGQNSVDPFWKEIKMGAMEAAKYYNVALE
FNAPKFNNIQEELKYLEIAIFSKVDGIITHVANNEEFVNLIEEAYKEGIPVITVENDAKDSKRQAFIGTNSFHLGEEAAR
LMAKATKGKANIAIIVSNDYQLDSVNQNLKINGFLDAIKNYPEMKVVRVYTSKLGTLSAEEITQSIISGKDKINAIYVTD
SVDTIGTAQVVVDFNKVGEITVVGYGDTPDILRYIEKGVIYGTVMSDPYKIGYESIKAMVEFKKKNTVSTFVDIGVNVIT
KENVNEYFKRIQSLD
>Mature_335_residues
MKTLKEKFFKLLDKVIIVSIIAISISAFLLYKFQTAQKPIFAKVPEYHFYMVGQNSVDPFWKEIKMGAMEAAKYYNVALE
FNAPKFNNIQEELKYLEIAIFSKVDGIITHVANNEEFVNLIEEAYKEGIPVITVENDAKDSKRQAFIGTNSFHLGEEAAR
LMAKATKGKANIAIIVSNDYQLDSVNQNLKINGFLDAIKNYPEMKVVRVYTSKLGTLSAEEITQSIISGKDKINAIYVTD
SVDTIGTAQVVVDFNKVGEITVVGYGDTPDILRYIEKGVIYGTVMSDPYKIGYESIKAMVEFKKKNTVSTFVDIGVNVIT
KENVNEYFKRIQSLD

Specific function: Part of the binding-protein-dependent transport system AlsBAC for D-allose [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790526, Length=260, Percent_Identity=24.6153846153846, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 37696; Mature: 37696

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLKEKFFKLLDKVIIVSIIAISISAFLLYKFQTAQKPIFAKVPEYHFYMVGQNSVDPF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEECCCCCHH
WKEIKMGAMEAAKYYNVALEFNAPKFNNIQEELKYLEIAIFSKVDGIITHVANNEEFVNL
HHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHH
IEEAYKEGIPVITVENDAKDSKRQAFIGTNSFHLGEEAARLMAKATKGKANIAIIVSNDY
HHHHHHCCCCEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCE
QLDSVNQNLKINGFLDAIKNYPEMKVVRVYTSKLGTLSAEEITQSIISGKDKINAIYVTD
EECCCCCCEEEHHHHHHHCCCCCEEEEEEEHHHCCCCCHHHHHHHHHCCCCCEEEEEEEC
SVDTIGTAQVVVDFNKVGEITVVGYGDTPDILRYIEKGVIYGTVMSDPYKIGYESIKAMV
CCCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHCCCEEEEEECCCHHHCHHHHHHHH
EFKKKNTVSTFVDIGVNVITKENVNEYFKRIQSLD
HHHHCCHHHHHHHCCCEEEECCCHHHHHHHHHCCC
>Mature Secondary Structure
MKTLKEKFFKLLDKVIIVSIIAISISAFLLYKFQTAQKPIFAKVPEYHFYMVGQNSVDPF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEECCCCCHH
WKEIKMGAMEAAKYYNVALEFNAPKFNNIQEELKYLEIAIFSKVDGIITHVANNEEFVNL
HHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHH
IEEAYKEGIPVITVENDAKDSKRQAFIGTNSFHLGEEAARLMAKATKGKANIAIIVSNDY
HHHHHHCCCCEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCE
QLDSVNQNLKINGFLDAIKNYPEMKVVRVYTSKLGTLSAEEITQSIISGKDKINAIYVTD
EECCCCCCEEEHHHHHHHCCCCCEEEEEEEHHHCCCCCHHHHHHHHHCCCCCEEEEEEEC
SVDTIGTAQVVVDFNKVGEITVVGYGDTPDILRYIEKGVIYGTVMSDPYKIGYESIKAMV
CCCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHCCCEEEEEECCCHHHCHHHHHHHH
EFKKKNTVSTFVDIGVNVITKENVNEYFKRIQSLD
HHHHCCHHHHHHHCCCEEEECCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 8576032; 9401019; 10064713 [H]