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The map label for this gene is DppC2 [H]

Identifier: 20806749

GI number: 20806749

Start: 232719

End: 233585

Strand: Direct

Name: DppC2 [H]

Synonym: TTE0226

Alternate gene names: 20806749

Gene position: 232719-233585 (Clockwise)

Preceding gene: 20806748

Following gene: 20806750

Centisome position: 8.65

GC content: 37.72

Gene sequence:

>867_bases
ATGAAAAATATATTAGCTAGCTTAAAAGAATCTTTAAAAATTATGATGAGGAATAAGGTGGGCTTTGTAGGTTTTATAGG
TACTCTGTTTTTTATACTGCTTGCTTTTATAGGACCTTATTTGATGCCTCTTAATATGAAAACAGATCTTAATAGTATTT
ACACGGGTCCTACCCTGGCTCATCCACTAGGTACAGATTACCAAGGAAGAGACATACTGATGCAGGTTCTTCATGGAGGT
AGAGAGGTAATATATGTAGCTTTAATGGCAGCGCTTTTAACTGTGCTAATTGCGGCGACTTTTGGTGCTTTGGCGGCGGT
GGTGGGTGGGATTGTGGATACATTGTTAAATGGTTTAGCAGAGATAATAATAACTATTCCTCATTTTCCATTATTGTTAG
TTTTAGCTTCACTTATCAAATTTAAATCTGCCACAGGATTAGCTGTAATATTGGCTGCTATTGGCTGGGGAGGATTAATG
AGAGCCATAAGAGCACAGGTTTTATCCTTAAAAGAAAGGGATTATGTAGAGGCGGCGAGAGTTTTAGGTTTGCCTACTAG
CCATATAATTTTCAAGGAAATTCTTCCTAATATGTTAAGTTATATCTCTGTACAATTTATTTTAAGTATGACAGGAGCTA
TATACGCACAAGTAGGGTTAATTTTCTTGGGAGTAGTTCCTATGGAACAGCATAACTGGGGTGTAATGATTACACTGGCA
TGGAACCAGGGGGCGTTGTTCAATCCGAAAGCCCAATGGTACTTGTTAGTTCCAATAACCATTATAGTGTTACTGCAGTT
GTCTCTTATCACTATGACTCGATCAATGGAAGAACTATTTAACCCCAGGTTAAGAAGAGGAGGATAA

Upstream 100 bases:

>100_bases
GAATTTCTTAGCAGATATTTTGCTAGGAGTGTTAGATCCTAGAATACGTACTTCCAGAAGCTGAATTAATAAATAAATTA
TCGGGAGAGGAAAGGTAGTA

Downstream 100 bases:

>100_bases
TATGGCAACAAAACACATTATAGTAGAGGATTTGAGTGTTGAATATTTAGGACCTACCAAAAAAATTTATGCACTCCAGC
ATGTTTCGCTCGAAATATAC

Product: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKNILASLKESLKIMMRNKVGFVGFIGTLFFILLAFIGPYLMPLNMKTDLNSIYTGPTLAHPLGTDYQGRDILMQVLHGG
REVIYVALMAALLTVLIAATFGALAAVVGGIVDTLLNGLAEIIITIPHFPLLLVLASLIKFKSATGLAVILAAIGWGGLM
RAIRAQVLSLKERDYVEAARVLGLPTSHIIFKEILPNMLSYISVQFILSMTGAIYAQVGLIFLGVVPMEQHNWGVMITLA
WNQGALFNPKAQWYLLVPITIIVLLQLSLITMTRSMEELFNPRLRRGG

Sequences:

>Translated_288_residues
MKNILASLKESLKIMMRNKVGFVGFIGTLFFILLAFIGPYLMPLNMKTDLNSIYTGPTLAHPLGTDYQGRDILMQVLHGG
REVIYVALMAALLTVLIAATFGALAAVVGGIVDTLLNGLAEIIITIPHFPLLLVLASLIKFKSATGLAVILAAIGWGGLM
RAIRAQVLSLKERDYVEAARVLGLPTSHIIFKEILPNMLSYISVQFILSMTGAIYAQVGLIFLGVVPMEQHNWGVMITLA
WNQGALFNPKAQWYLLVPITIIVLLQLSLITMTRSMEELFNPRLRRGG
>Mature_288_residues
MKNILASLKESLKIMMRNKVGFVGFIGTLFFILLAFIGPYLMPLNMKTDLNSIYTGPTLAHPLGTDYQGRDILMQVLHGG
REVIYVALMAALLTVLIAATFGALAAVVGGIVDTLLNGLAEIIITIPHFPLLLVLASLIKFKSATGLAVILAAIGWGGLM
RAIRAQVLSLKERDYVEAARVLGLPTSHIIFKEILPNMLSYISVQFILSMTGAIYAQVGLIFLGVVPMEQHNWGVMITLA
WNQGALFNPKAQWYLLVPITIIVLLQLSLITMTRSMEELFNPRLRRGG

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=260, Percent_Identity=26.1538461538462, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787498, Length=284, Percent_Identity=28.169014084507, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1789964, Length=290, Percent_Identity=27.5862068965517, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787054, Length=236, Percent_Identity=25.4237288135593, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1788505, Length=227, Percent_Identity=26.8722466960352, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789889, Length=213, Percent_Identity=27.2300469483568, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31547; Mature: 31547

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNILASLKESLKIMMRNKVGFVGFIGTLFFILLAFIGPYLMPLNMKTDLNSIYTGPTLA
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCC
HPLGTDYQGRDILMQVLHGGREVIYVALMAALLTVLIAATFGALAAVVGGIVDTLLNGLA
CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIIITIPHFPLLLVLASLIKFKSATGLAVILAAIGWGGLMRAIRAQVLSLKERDYVEAAR
HHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGLPTSHIIFKEILPNMLSYISVQFILSMTGAIYAQVGLIFLGVVPMEQHNWGVMITLA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
WNQGALFNPKAQWYLLVPITIIVLLQLSLITMTRSMEELFNPRLRRGG
ECCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MKNILASLKESLKIMMRNKVGFVGFIGTLFFILLAFIGPYLMPLNMKTDLNSIYTGPTLA
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCC
HPLGTDYQGRDILMQVLHGGREVIYVALMAALLTVLIAATFGALAAVVGGIVDTLLNGLA
CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIIITIPHFPLLLVLASLIKFKSATGLAVILAAIGWGGLMRAIRAQVLSLKERDYVEAAR
HHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGLPTSHIIFKEILPNMLSYISVQFILSMTGAIYAQVGLIFLGVVPMEQHNWGVMITLA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
WNQGALFNPKAQWYLLVPITIIVLLQLSLITMTRSMEELFNPRLRRGG
ECCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377; 3145906 [H]