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The map label for this gene is DppB2 [C]

Identifier: 20806748

GI number: 20806748

Start: 231663

End: 232682

Strand: Direct

Name: DppB2 [C]

Synonym: TTE0225

Alternate gene names: 20806748

Gene position: 231663-232682 (Clockwise)

Preceding gene: 20806747

Following gene: 20806749

Centisome position: 8.61

GC content: 33.73

Gene sequence:

>1020_bases
ATGATGAAAAAAATCTTAACAAATTACTTTTTCATAAGATTTTTAAGAGCATTAGTTACAATTTTTGTGGTAGCTACTTT
TACGTTTTTCTTGATACGCCTTATGCCGGGGAATCCTTTAGATATTTTTATAGCAACTCAGTTATCTCAGGGAGTTCCTT
TACAAGAGGCGCAAGAAAGAGCAGCTTCGCTATTTCACATAGACTTAAGTAAACCTTTGTTAGTGCAATACGTGGATTAT
TTAAAAAATTTAGCAAGAGGGGATTTTGGAGTATCAATTATTTCTACAAATACTCCAGTAAGTAAAATAATATTGCGCTT
TTTACCTTGGACGTTGTTTGTAGTTACTGTGTCGCTATTTATAAGTTTTGTTGGCGGTGTACTTCTAGGGGTTTTAATGG
CAATTTACAGGAATAGTTGGTTAGATCAAATTCTCTCTTTCTTTGCTTCTATTATTTCAGCTATACCGAATTACGTTATA
GCTATGTTAATAGTAGTTTACTTTGGAGTAAAATTGAAATGGTTTAATATCGCTGAGATAAGAGGTTCCTTATCGCCAGG
TGTAAGACCTGAATTTTCACTCTATTTTTTGAAAGATGCTTTTTACCATGCTATGCTTCCGATAATAGTGTATGTACTTA
CAACCATAGGCTCGTGGATGTTAGTTATGAAATCAAGTACAATTTCAACTTTAGGGGAAGATTATGTAGAAGTTGCAAAA
GCGAGAGGAATAAAGCAAGCTAATATAATGATAAACTATGTAGGACGAAATGCTATCTTGCCATTATTTGTATCTTTAGC
AATTTCTATTGGATTTGTAGTAGGTGGTTCGCCTTTAATTGAAAGTATTTTTGTGTATCAAGGCATAGGGCTCAAACTTA
GCGATGCTATAGTTACGCGAGATTATCCTGTAATGCAAGCAATATTTCTAATAATTACTGCTTCGGTTGTATTTGCGAAT
TTCTTAGCAGATATTTTGCTAGGAGTGTTAGATCCTAGAATACGTACTTCCAGAAGCTGA

Upstream 100 bases:

>100_bases
AAGAAGGGAGGTATACAAAAATTTACATTGAAAGACAAGTATTTTCTTTAAAAAAGATAAACTTTATGTAAACTTTTAAT
AATGGAATAGGTGATGATAA

Downstream 100 bases:

>100_bases
ATTAATAAATAAATTATCGGGAGAGGAAAGGTAGTAATGAAAAATATATTAGCTAGCTTAAAAGAATCTTTAAAAATTAT
GATGAGGAATAAGGTGGGCT

Product: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MMKKILTNYFFIRFLRALVTIFVVATFTFFLIRLMPGNPLDIFIATQLSQGVPLQEAQERAASLFHIDLSKPLLVQYVDY
LKNLARGDFGVSIISTNTPVSKIILRFLPWTLFVVTVSLFISFVGGVLLGVLMAIYRNSWLDQILSFFASIISAIPNYVI
AMLIVVYFGVKLKWFNIAEIRGSLSPGVRPEFSLYFLKDAFYHAMLPIIVYVLTTIGSWMLVMKSSTISTLGEDYVEVAK
ARGIKQANIMINYVGRNAILPLFVSLAISIGFVVGGSPLIESIFVYQGIGLKLSDAIVTRDYPVMQAIFLIITASVVFAN
FLADILLGVLDPRIRTSRS

Sequences:

>Translated_339_residues
MMKKILTNYFFIRFLRALVTIFVVATFTFFLIRLMPGNPLDIFIATQLSQGVPLQEAQERAASLFHIDLSKPLLVQYVDY
LKNLARGDFGVSIISTNTPVSKIILRFLPWTLFVVTVSLFISFVGGVLLGVLMAIYRNSWLDQILSFFASIISAIPNYVI
AMLIVVYFGVKLKWFNIAEIRGSLSPGVRPEFSLYFLKDAFYHAMLPIIVYVLTTIGSWMLVMKSSTISTLGEDYVEVAK
ARGIKQANIMINYVGRNAILPLFVSLAISIGFVVGGSPLIESIFVYQGIGLKLSDAIVTRDYPVMQAIFLIITASVVFAN
FLADILLGVLDPRIRTSRS
>Mature_339_residues
MMKKILTNYFFIRFLRALVTIFVVATFTFFLIRLMPGNPLDIFIATQLSQGVPLQEAQERAASLFHIDLSKPLLVQYVDY
LKNLARGDFGVSIISTNTPVSKIILRFLPWTLFVVTVSLFISFVGGVLLGVLMAIYRNSWLDQILSFFASIISAIPNYVI
AMLIVVYFGVKLKWFNIAEIRGSLSPGVRPEFSLYFLKDAFYHAMLPIIVYVLTTIGSWMLVMKSSTISTLGEDYVEVAK
ARGIKQANIMINYVGRNAILPLFVSLAISIGFVVGGSPLIESIFVYQGIGLKLSDAIVTRDYPVMQAIFLIITASVVFAN
FLADILLGVLDPRIRTSRS

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=330, Percent_Identity=28.1818181818182, Blast_Score=158, Evalue=5e-40,
Organism=Escherichia coli, GI1789965, Length=347, Percent_Identity=28.2420749279539, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1789888, Length=333, Percent_Identity=28.8288288288288, Blast_Score=137, Evalue=9e-34,
Organism=Escherichia coli, GI1787497, Length=323, Percent_Identity=27.2445820433437, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1788504, Length=358, Percent_Identity=28.4916201117318, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1787761, Length=325, Percent_Identity=26.7692307692308, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1787550, Length=270, Percent_Identity=25.1851851851852, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37842; Mature: 37842

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKILTNYFFIRFLRALVTIFVVATFTFFLIRLMPGNPLDIFIATQLSQGVPLQEAQER
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCHHHHHHH
AASLFHIDLSKPLLVQYVDYLKNLARGDFGVSIISTNTPVSKIILRFLPWTLFVVTVSLF
HHHEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
ISFVGGVLLGVLMAIYRNSWLDQILSFFASIISAIPNYVIAMLIVVYFGVKLKWFNIAEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHH
RGSLSPGVRPEFSLYFLKDAFYHAMLPIIVYVLTTIGSWMLVMKSSTISTLGEDYVEVAK
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ARGIKQANIMINYVGRNAILPLFVSLAISIGFVVGGSPLIESIFVYQGIGLKLSDAIVTR
HCCCCCHHHEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHCC
DYPVMQAIFLIITASVVFANFLADILLGVLDPRIRTSRS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MMKKILTNYFFIRFLRALVTIFVVATFTFFLIRLMPGNPLDIFIATQLSQGVPLQEAQER
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCHHHHHHH
AASLFHIDLSKPLLVQYVDYLKNLARGDFGVSIISTNTPVSKIILRFLPWTLFVVTVSLF
HHHEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
ISFVGGVLLGVLMAIYRNSWLDQILSFFASIISAIPNYVIAMLIVVYFGVKLKWFNIAEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHH
RGSLSPGVRPEFSLYFLKDAFYHAMLPIIVYVLTTIGSWMLVMKSSTISTLGEDYVEVAK
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ARGIKQANIMINYVGRNAILPLFVSLAISIGFVVGGSPLIESIFVYQGIGLKLSDAIVTR
HCCCCCHHHEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHCC
DYPVMQAIFLIITASVVFANFLADILLGVLDPRIRTSRS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA