| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is DppD2 [C]
Identifier: 20806750
GI number: 20806750
Start: 233587
End: 234621
Strand: Direct
Name: DppD2 [C]
Synonym: TTE0227
Alternate gene names: 20806750
Gene position: 233587-234621 (Clockwise)
Preceding gene: 20806749
Following gene: 20806751
Centisome position: 8.69
GC content: 36.91
Gene sequence:
>1035_bases ATGGCAACAAAACACATTATAGTAGAGGATTTGAGTGTTGAATATTTAGGACCTACCAAAAAAATTTATGCACTCCAGCA TGTTTCGCTCGAAATATACAGAGGAGAATCTATTGCGCTGGTTGGAGAAAGTGGTTGTGGGAAATCAACATTGGGCGTAG CTTTTATAAGACTACTTCCTGTAAACAGCAGGATAACTAGTGGGCGAATAAGATTCGTAGATGGTTCAAGAGAAATAAAT ATTCTTGAACTTTCACAGAGTGAATTACAAAAAATTCGCTGGTCAAAAATAGTTATGATGGCGCAAGGAGCACTTAATGC TTTCAACCCAGTGATGCGCATAAAAGACCATTTCATAGATACAGCTTACTCACATGGGTGGAAAAATAAAACGGAAGTTT TAAAGAAAGCACGTTATTTGTTAGAAAGAGTACACTTAGACAGTGAAAGAGTATTAAACTCATTTCCCCATGAATTATCT GGAGGGATGAGGCAAAGAGTACTTCTTTCATTGGGGTTGTTCTTAAATCCAGAAGTTGTAATACTTGATGAACCTACGAC TGCTTTGGATATATTGACACAAAGGAATATAATAGAGTTATTAAAGGAACTCAAAAAGGAGTTTAATTTCACGCTGATAT TTATAACGCATGACCTTAGTTTAGCTGCTGAACTAGCAGATAGGGTTGCAGTGATGTATGCAGGGAAAATAGTAGAAGTT GGAGATGTGTATAATATATTTGGCACTCCGTACCATCCCTATACTGCAGGATTAATTACTTCTACTCCTAAATTGAGAGG CAAAAGCACAGAAATAACTTCTATCCCAGGGTCACCTCCTAATTTATCAGAGATATTCAAAGGATGTCCATTTTATGAAA GGTGTCCTTTAAGGAGTAGTGTATGCTTAAATACACCACCTACATTGACCTTTGTAGACGGGCAGGAAGGGCATTTCGTA GCATGTCATCATGCAAGCAAAGATACTTTATCTAAAATAAGACAAAGTGATTGGCTTTCAACTATCCAAAAATAG
Upstream 100 bases:
>100_bases GTTCCAATAACCATTATAGTGTTACTGCAGTTGTCTCTTATCACTATGACTCGATCAATGGAAGAACTATTTAACCCCAG GTTAAGAAGAGGAGGATAAT
Downstream 100 bases:
>100_bases AGAGGGATTAAAAGTGGAAGAATTGGTAATTGAACTTAACAATATAAAAAAATTTTACCGGAAAAGAAATAGAGTGGTGA AAGTTATAAACGATATAAGC
Product: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MATKHIIVEDLSVEYLGPTKKIYALQHVSLEIYRGESIALVGESGCGKSTLGVAFIRLLPVNSRITSGRIRFVDGSREIN ILELSQSELQKIRWSKIVMMAQGALNAFNPVMRIKDHFIDTAYSHGWKNKTEVLKKARYLLERVHLDSERVLNSFPHELS GGMRQRVLLSLGLFLNPEVVILDEPTTALDILTQRNIIELLKELKKEFNFTLIFITHDLSLAAELADRVAVMYAGKIVEV GDVYNIFGTPYHPYTAGLITSTPKLRGKSTEITSIPGSPPNLSEIFKGCPFYERCPLRSSVCLNTPPTLTFVDGQEGHFV ACHHASKDTLSKIRQSDWLSTIQK
Sequences:
>Translated_344_residues MATKHIIVEDLSVEYLGPTKKIYALQHVSLEIYRGESIALVGESGCGKSTLGVAFIRLLPVNSRITSGRIRFVDGSREIN ILELSQSELQKIRWSKIVMMAQGALNAFNPVMRIKDHFIDTAYSHGWKNKTEVLKKARYLLERVHLDSERVLNSFPHELS GGMRQRVLLSLGLFLNPEVVILDEPTTALDILTQRNIIELLKELKKEFNFTLIFITHDLSLAAELADRVAVMYAGKIVEV GDVYNIFGTPYHPYTAGLITSTPKLRGKSTEITSIPGSPPNLSEIFKGCPFYERCPLRSSVCLNTPPTLTFVDGQEGHFV ACHHASKDTLSKIRQSDWLSTIQK >Mature_343_residues ATKHIIVEDLSVEYLGPTKKIYALQHVSLEIYRGESIALVGESGCGKSTLGVAFIRLLPVNSRITSGRIRFVDGSREINI LELSQSELQKIRWSKIVMMAQGALNAFNPVMRIKDHFIDTAYSHGWKNKTEVLKKARYLLERVHLDSERVLNSFPHELSG GMRQRVLLSLGLFLNPEVVILDEPTTALDILTQRNIIELLKELKKEFNFTLIFITHDLSLAAELADRVAVMYAGKIVEVG DVYNIFGTPYHPYTAGLITSTPKLRGKSTEITSIPGSPPNLSEIFKGCPFYERCPLRSSVCLNTPPTLTFVDGQEGHFVA CHHASKDTLSKIRQSDWLSTIQK
Specific function: Probably part of a binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for energy coupling to the transport system [H]
COG id: COG0444
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI153792144, Length=243, Percent_Identity=29.2181069958848, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI27436953, Length=250, Percent_Identity=26, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI27477115, Length=259, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI105990541, Length=229, Percent_Identity=29.6943231441048, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI116734710, Length=250, Percent_Identity=28.4, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI4505771, Length=232, Percent_Identity=27.5862068965517, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI9961252, Length=232, Percent_Identity=27.5862068965517, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI9961250, Length=232, Percent_Identity=28.0172413793103, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI27262624, Length=250, Percent_Identity=27.6, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI27262626, Length=250, Percent_Identity=27.6, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI6005701, Length=256, Percent_Identity=25.78125, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI21536376, Length=232, Percent_Identity=30.1724137931034, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI45446740, Length=265, Percent_Identity=26.4150943396226, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI47078218, Length=265, Percent_Identity=26.4150943396226, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI27881501, Length=242, Percent_Identity=28.9256198347107, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI30795238, Length=242, Percent_Identity=28.9256198347107, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI31657092, Length=220, Percent_Identity=28.6363636363636, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI48994883, Length=309, Percent_Identity=39.4822006472492, Blast_Score=246, Evalue=1e-66, Organism=Escherichia coli, GI1787759, Length=326, Percent_Identity=35.2760736196319, Blast_Score=213, Evalue=2e-56, Organism=Escherichia coli, GI1789963, Length=323, Percent_Identity=33.7461300309598, Blast_Score=204, Evalue=5e-54, Organism=Escherichia coli, GI145693107, Length=263, Percent_Identity=38.0228136882129, Blast_Score=204, Evalue=7e-54, Organism=Escherichia coli, GI1789962, Length=314, Percent_Identity=34.7133757961783, Blast_Score=183, Evalue=1e-47, Organism=Escherichia coli, GI1787500, Length=322, Percent_Identity=33.5403726708075, Blast_Score=181, Evalue=5e-47, Organism=Escherichia coli, GI1788506, Length=265, Percent_Identity=38.1132075471698, Blast_Score=176, Evalue=2e-45, Organism=Escherichia coli, GI1787548, Length=325, Percent_Identity=31.0769230769231, Blast_Score=172, Evalue=3e-44, Organism=Escherichia coli, GI1787758, Length=299, Percent_Identity=33.7792642140468, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI1789890, Length=241, Percent_Identity=36.9294605809129, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI1786398, Length=281, Percent_Identity=33.8078291814947, Blast_Score=124, Evalue=9e-30, Organism=Escherichia coli, GI1789032, Length=234, Percent_Identity=35.8974358974359, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI48994997, Length=236, Percent_Identity=30.5084745762712, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1789891, Length=225, Percent_Identity=36, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1788225, Length=252, Percent_Identity=33.3333333333333, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI87081791, Length=246, Percent_Identity=34.5528455284553, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1790162, Length=262, Percent_Identity=29.7709923664122, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI87081709, Length=235, Percent_Identity=28.936170212766, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1788761, Length=255, Percent_Identity=30.1960784313725, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1787712, Length=252, Percent_Identity=31.7460317460317, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787029, Length=237, Percent_Identity=31.2236286919831, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1790467, Length=252, Percent_Identity=30.1587301587302, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1787089, Length=222, Percent_Identity=31.5315315315315, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1787547, Length=248, Percent_Identity=26.2096774193548, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI87082267, Length=243, Percent_Identity=30.0411522633745, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1787370, Length=235, Percent_Identity=29.3617021276596, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1786803, Length=241, Percent_Identity=31.1203319502075, Blast_Score=88, Evalue=8e-19, Organism=Escherichia coli, GI1786703, Length=215, Percent_Identity=36.2790697674419, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1789672, Length=241, Percent_Identity=28.6307053941909, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787105, Length=231, Percent_Identity=30.7359307359307, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1786872, Length=209, Percent_Identity=33.9712918660287, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1790739, Length=265, Percent_Identity=32.0754716981132, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI87081834, Length=230, Percent_Identity=31.304347826087, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1787143, Length=235, Percent_Identity=30.6382978723404, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI1788644, Length=125, Percent_Identity=34.4, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787164, Length=213, Percent_Identity=32.3943661971831, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1786319, Length=218, Percent_Identity=28.8990825688073, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI48994943, Length=218, Percent_Identity=27.0642201834862, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1790534, Length=219, Percent_Identity=28.310502283105, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788450, Length=233, Percent_Identity=25.7510729613734, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1787112, Length=250, Percent_Identity=28.8, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787182, Length=238, Percent_Identity=29.4117647058824, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789586, Length=231, Percent_Identity=29.8701298701299, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1786563, Length=212, Percent_Identity=26.8867924528302, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI87082268, Length=225, Percent_Identity=28, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1789991, Length=239, Percent_Identity=26.7782426778243, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1786698, Length=236, Percent_Identity=29.2372881355932, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1786345, Length=240, Percent_Identity=27.0833333333333, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787792, Length=221, Percent_Identity=26.6968325791855, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1786653, Length=231, Percent_Identity=29.004329004329, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25146777, Length=238, Percent_Identity=31.0924369747899, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17565586, Length=260, Percent_Identity=28.0769230769231, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI71996550, Length=248, Percent_Identity=31.4516129032258, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17543740, Length=239, Percent_Identity=32.2175732217573, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17569143, Length=232, Percent_Identity=30.6034482758621, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17541710, Length=251, Percent_Identity=29.4820717131474, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17567269, Length=237, Percent_Identity=30.379746835443, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17569145, Length=233, Percent_Identity=30.0429184549356, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI115535101, Length=232, Percent_Identity=28.0172413793103, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17510237, Length=221, Percent_Identity=24.8868778280543, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI212646699, Length=252, Percent_Identity=28.1746031746032, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17569081, Length=229, Percent_Identity=26.2008733624454, Blast_Score=65, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6319856, Length=225, Percent_Identity=27.1111111111111, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI85726357, Length=243, Percent_Identity=27.5720164609054, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI17136662, Length=244, Percent_Identity=27.4590163934426, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI221512771, Length=234, Percent_Identity=26.4957264957265, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI281363262, Length=253, Percent_Identity=27.6679841897233, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21357907, Length=237, Percent_Identity=32.0675105485232, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24653245, Length=253, Percent_Identity=27.6679841897233, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI28574744, Length=218, Percent_Identity=28.8990825688073, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI17136592, Length=252, Percent_Identity=24.6031746031746, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24648314, Length=226, Percent_Identity=23.4513274336283, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR010066 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 38567; Mature: 38436
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKHIIVEDLSVEYLGPTKKIYALQHVSLEIYRGESIALVGESGCGKSTLGVAFIRLLP CCCCEEEEEECEEEECCCCHHEEEEEEEEEEEEECCEEEEEECCCCCCHHHHHHHHHEEE VNSRITSGRIRFVDGSREINILELSQSELQKIRWSKIVMMAQGALNAFNPVMRIKDHFID CCCCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH TAYSHGWKNKTEVLKKARYLLERVHLDSERVLNSFPHELSGGMRQRVLLSLGLFLNPEVV HHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCEE ILDEPTTALDILTQRNIIELLKELKKEFNFTLIFITHDLSLAAELADRVAVMYAGKIVEV EEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHCCCEEEE GDVYNIFGTPYHPYTAGLITSTPKLRGKSTEITSIPGSPPNLSEIFKGCPFYERCPLRSS CCCHHHCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCHHHHHCCCCCHHCCCCCCC VCLNTPPTLTFVDGQEGHFVACHHASKDTLSKIRQSDWLSTIQK EEECCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ATKHIIVEDLSVEYLGPTKKIYALQHVSLEIYRGESIALVGESGCGKSTLGVAFIRLLP CCCEEEEEECEEEECCCCHHEEEEEEEEEEEEECCEEEEEECCCCCCHHHHHHHHHEEE VNSRITSGRIRFVDGSREINILELSQSELQKIRWSKIVMMAQGALNAFNPVMRIKDHFID CCCCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH TAYSHGWKNKTEVLKKARYLLERVHLDSERVLNSFPHELSGGMRQRVLLSLGLFLNPEVV HHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCEE ILDEPTTALDILTQRNIIELLKELKKEFNFTLIFITHDLSLAAELADRVAVMYAGKIVEV EEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHCCCEEEE GDVYNIFGTPYHPYTAGLITSTPKLRGKSTEITSIPGSPPNLSEIFKGCPFYERCPLRSS CCCHHHCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCHHHHHCCCCCHHCCCCCCC VCLNTPPTLTFVDGQEGHFVACHHASKDTLSKIRQSDWLSTIQK EEECCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]