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The map label for this gene is RpiR [C]

Identifier: 20806737

GI number: 20806737

Start: 217737

End: 218585

Strand: Direct

Name: RpiR [C]

Synonym: TTE0211

Alternate gene names: 20806737

Gene position: 217737-218585 (Clockwise)

Preceding gene: 20806736

Following gene: 20806738

Centisome position: 8.1

GC content: 38.16

Gene sequence:

>849_bases
ATGACGGACGTTTTAGCAGTAATCAGAGAAATGAGCTCTAGTTTTACACCTTCAGAAGCCAAAATTGCAAAGTACATTTT
AGAGAATCCGACTGTTGTTACAGAATTATCTGTAAATGAATTGGCCAATGCTTGTGATACTAGTGAGGCAAGTATCATAA
GGTTTTGTAGAACTATAGGCTTGAAAGGGTTTCAAGAGTTAAAAATCAAAATTGCTGTCTCCCTTGCAAAGCAAACAAGA
AAGCTGGATGGAGGCATTACTAGTGAAGACGATGTTATGGCTGTGATACAGAAAATAGCTAATTTTAACAAACAAGCGAT
CGATAGCACTATCGCAGTTTTAAACGCAGAGGAATTGACAAAAGCTGCAGAAGCTCTTGCAAATGCAAATAAGATTGATT
TTTACGGGGTTGCGGCTTCTGGAGTGGTGGCTTATGACGCAATGTTAAAATTTTCTAGAATAAATATACCATGCACTGCG
TATCAAGACACTCACCTACAGCTAACGTCTGCAGTTAATTTAAAAAAGGGAGATGTAGCATTTGGAATTTCTTATTCAGG
AGCTACTAAAGAAATAGTTGAAGCTATTCAAACTGCCAAGGAGGCGGGAGCAACTACTATAAGCTTGACGAAATACGGAC
AGTCACCCCTTGCCAAAGCTGCTGATATAAATCTATTTGTTTCTTCTGAGGAGGCTATGTTTAGAGCGGGGGCTATGGCC
TCCCGCATAGCCCAACTTACTGTTATTGATATATTATTCATTTTAGTAGCACAAAAAAAGTATAACGACGTAGTCAGATA
TCTTGAAAACACCAGTGAAGTGCTATCTATGCGCAAAATAAATAATTAA

Upstream 100 bases:

>100_bases
TGTTTATGAAGTAAAACTACACATTTTTTTAAAATTTAAGAAGGAATTTTACAACTTACGTCGAATATATATATTAACAA
GAAAGAGAAGGGCGGTCAGT

Downstream 100 bases:

>100_bases
ATCAAAGAAAGGACTGGGTTTAATGACGCTAGAGGAATTAATAACCGAAGGAAGAAATCCAAACACTATGGATATAGATA
GACTTAGCACCGTTGATATG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MTDVLAVIREMSSSFTPSEAKIAKYILENPTVVTELSVNELANACDTSEASIIRFCRTIGLKGFQELKIKIAVSLAKQTR
KLDGGITSEDDVMAVIQKIANFNKQAIDSTIAVLNAEELTKAAEALANANKIDFYGVAASGVVAYDAMLKFSRINIPCTA
YQDTHLQLTSAVNLKKGDVAFGISYSGATKEIVEAIQTAKEAGATTISLTKYGQSPLAKAADINLFVSSEEAMFRAGAMA
SRIAQLTVIDILFILVAQKKYNDVVRYLENTSEVLSMRKINN

Sequences:

>Translated_282_residues
MTDVLAVIREMSSSFTPSEAKIAKYILENPTVVTELSVNELANACDTSEASIIRFCRTIGLKGFQELKIKIAVSLAKQTR
KLDGGITSEDDVMAVIQKIANFNKQAIDSTIAVLNAEELTKAAEALANANKIDFYGVAASGVVAYDAMLKFSRINIPCTA
YQDTHLQLTSAVNLKKGDVAFGISYSGATKEIVEAIQTAKEAGATTISLTKYGQSPLAKAADINLFVSSEEAMFRAGAMA
SRIAQLTVIDILFILVAQKKYNDVVRYLENTSEVLSMRKINN
>Mature_281_residues
TDVLAVIREMSSSFTPSEAKIAKYILENPTVVTELSVNELANACDTSEASIIRFCRTIGLKGFQELKIKIAVSLAKQTRK
LDGGITSEDDVMAVIQKIANFNKQAIDSTIAVLNAEELTKAAEALANANKIDFYGVAASGVVAYDAMLKFSRINIPCTAY
QDTHLQLTSAVNLKKGDVAFGISYSGATKEIVEAIQTAKEAGATTISLTKYGQSPLAKAADINLFVSSEEAMFRAGAMAS
RIAQLTVIDILFILVAQKKYNDVVRYLENTSEVLSMRKINN

Specific function: Represses The Expression Of The Hex Regulon (Zwf, Eda, Glp And Gap) (By Similarity). [C]

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain

Homologues:

Organism=Escherichia coli, GI1788159, Length=264, Percent_Identity=34.8484848484849, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1788767, Length=279, Percent_Identity=32.6164874551971, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI87082369, Length=251, Percent_Identity=28.6852589641434, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI87082130, Length=256, Percent_Identity=27.734375, Blast_Score=107, Evalue=8e-25,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): Y211_THETN (Q8RD36)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_621908.1
- ProteinModelPortal:   Q8RD36
- SMR:   Q8RD36
- GeneID:   995630
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE0211
- NMPDR:   fig|273068.3.peg.881
- HOGENOM:   HBG725281
- OMA:   NELANAC
- ProtClustDB:   CLSK882326
- BioCyc:   TTEN273068:TTE0211-MONOMER
- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF01418 HTH_6; PF01380 SIS

EC number: NA

Molecular weight: Translated: 30480; Mature: 30349

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS51071 HTH_RPIR; PS51464 SIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVLAVIREMSSSFTPSEAKIAKYILENPTVVTELSVNELANACDTSEASIIRFCRTIG
CHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHCCCCHHHHHHHHHHHC
LKGFQELKIKIAVSLAKQTRKLDGGITSEDDVMAVIQKIANFNKQAIDSTIAVLNAEELT
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KAAEALANANKIDFYGVAASGVVAYDAMLKFSRINIPCTAYQDTHLQLTSAVNLKKGDVA
HHHHHHHCCCCCEEEEEHHCCHHHHHHHHHHHHCCCCEEECCCCCEEEEHCCCCCCCCEE
FGISYSGATKEIVEAIQTAKEAGATTISLTKYGQSPLAKAADINLFVSSEEAMFRAGAMA
EEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHCCEEEEEECCHHHHHHHHHH
SRIAQLTVIDILFILVAQKKYNDVVRYLENTSEVLSMRKINN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDVLAVIREMSSSFTPSEAKIAKYILENPTVVTELSVNELANACDTSEASIIRFCRTIG
HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHCCCCHHHHHHHHHHHC
LKGFQELKIKIAVSLAKQTRKLDGGITSEDDVMAVIQKIANFNKQAIDSTIAVLNAEELT
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KAAEALANANKIDFYGVAASGVVAYDAMLKFSRINIPCTAYQDTHLQLTSAVNLKKGDVA
HHHHHHHCCCCCEEEEEHHCCHHHHHHHHHHHHCCCCEEECCCCCEEEEHCCCCCCCCEE
FGISYSGATKEIVEAIQTAKEAGATTISLTKYGQSPLAKAADINLFVSSEEAMFRAGAMA
EEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHCCEEEEEECCHHHHHHHHHH
SRIAQLTVIDILFILVAQKKYNDVVRYLENTSEVLSMRKINN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336