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The map label for this gene is yaaA [H]

Identifier: 20806545

GI number: 20806545

Start: 3060

End: 3266

Strand: Direct

Name: yaaA [H]

Synonym: TTE0003

Alternate gene names: 20806545

Gene position: 3060-3266 (Clockwise)

Preceding gene: 20806544

Following gene: 20806546

Centisome position: 0.11

GC content: 33.82

Gene sequence:

>207_bases
ATGATAGAGATTCCCATCAAAACAGAGTATATAACTTTGGGACAGTTTTTGAAGTATGCAAAGGTGTGCGATACAGGTGG
ACAAGCAAAGAGATTTATCCAAGAAGGAAAAGTAAAGGTAAACGGAGTTATAGAGCTTAAAAGAGGAAGGAAACTTTATA
AAAATGATATAATTGAAGTGGAAGGAAAGACTTTTGTGATAAAGTGA

Upstream 100 bases:

>100_bases
TTCATAAACAGCATAAATCCGCTAATAATAAAACCAGTGGGGGAAAAGGAATACCTCTACATGATACTGCCGGTGAAGCT
TAACTAAGAGGTGTTATTTG

Downstream 100 bases:

>100_bases
GGAGTCCATCTTGTACTTAAAGGAAATTTTTGTAGACAATTTTAGAAATTTAAAAAAGCAAAAATTAGAATTCTGTGAAG
GAGTCAATTTGATATATGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MIEIPIKTEYITLGQFLKYAKVCDTGGQAKRFIQEGKVKVNGVIELKRGRKLYKNDIIEVEGKTFVIK

Sequences:

>Translated_68_residues
MIEIPIKTEYITLGQFLKYAKVCDTGGQAKRFIQEGKVKVNGVIELKRGRKLYKNDIIEVEGKTFVIK
>Mature_68_residues
MIEIPIKTEYITLGQFLKYAKVCDTGGQAKRFIQEGKVKVNGVIELKRGRKLYKNDIIEVEGKTFVIK

Specific function: Unknown

COG id: COG2501

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014330
- InterPro:   IPR002942 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7788; Mature: 7788

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEIPIKTEYITLGQFLKYAKVCDTGGQAKRFIQEGKVKVNGVIELKRGRKLYKNDIIEV
CEECCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEEEECCCCCCCCCCEEEE
EGKTFVIK
CCCEEEEC
>Mature Secondary Structure
MIEIPIKTEYITLGQFLKYAKVCDTGGQAKRFIQEGKVKVNGVIELKRGRKLYKNDIIEV
CEECCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEEEECCCCCCCCCCEEEE
EGKTFVIK
CCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987847; 7584024; 9384377 [H]