| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is manA [H]
Identifier: 203284317
GI number: 203284317
Start: 430267
End: 431388
Strand: Reverse
Name: manA [H]
Synonym: BDU_401
Alternate gene names: 203284317
Gene position: 431388-430267 (Counterclockwise)
Preceding gene: 203284318
Following gene: 203284314
Centisome position: 46.3
GC content: 28.52
Gene sequence:
>1122_bases ATGAGTGTTGATAATATATTTTTGATGAAAAATGAGATTAAGGAGTATGATTGGGGTGGATATGGTTTCATCCCTTCCCT TTTGGGACAAAAAAAAGACGGTTTGCCAAAAGCTGAAATGTGGCTTGGTGCACATAAAACATTTTCTAGTAAAATATTAG TTGATGGTCAATATGTTTCTCTTTTTAATTTTTTAGAAATACATAAAGAGCTTTTAGGTTTTGGGAGTGAATTGTCGTTT TTATTTAAAATTCTTTCAGTGCATAAACCTTTGTCACTGCAGATACATCCTTCAAAAGATATTGCTTTAAAAGGCTTTGC GCTTGAAAATAATAAAAAAATAGTTATTGATGATTCTAAGAGAATTTATAAGGATGAAAATCCTAAAGTAGAGCTTGTTT ATGCTTTGAGTGATTTTTATGCTCTTAAAGGTTTTTTGCCACTTGATGGCATTAACCATATTTATAGAAGTTTAGGATTG GATTTTAATTTTATGACACATGAATCGTTTGTAAAAACCTTATTTGATTTACACGAATTTGAAATTGAGAATATTATTTA TAAAGTGTTAGATAATTTAAATTTTATAGATGAATTTAGAGCTTTTTGGTTTAATGAAATTTATAAAATGTATGGTATTG ATATTGGTCTTTTGGTATTTTTGGGAATGTATATTTTTAAATTAAAAACAGGTGAAGTTTTTTATACTGAAAGTCGAGAA GTTCATGCTTATCTTAAAGGTGAATGCATTGAACTTATGACTAATTCTGATAATGTCATTAGAGCAGGTTTTACAACTAA ACATATTGACAAAGATGAAATGTTGAAGGTTGGAAAATTTGAGGAGGGAGTTTTTTCATTGTTAAAGAGTGAAAATATTG ATGGTTGTGATGTATTTAAGTTGCCAGGTACCAATTTAAGTTTGTTTCACAAATGTATAGGTGGAGAGAGCTACTTTGAA AGAGTTGGTGTTATGATATTATTAGTTATAAAAGGAAAAGTTCAGCTTAATAATAGAATTTCTCTTAAGATGGGAGATAG TGTGTTTATAGGGAATTGTGATTGTAATAAGGAATTGTCAATTTGTGGTAATGGAGAAATTTTTATTGCGCTTTCTTTAT AG
Upstream 100 bases:
>100_bases TTGATCATAAATTTGGATTTCTTGTTGCAATAGCTGTTGGTGTTGCGGTGGCAACAAGTGTAGTTATTTTTTTGAAATCT TTAAAGGTTAAGGTATCTAA
Downstream 100 bases:
>100_bases TTAAGATATTGATTTTTAATTTTTAATTTTAAGAAAAGATATTTAATAATTTATATAAACATTTTAATAAATCCAATTGC AAAAAATTTAAATCTCATGC
Product: mannose-6-phosphate isomerase
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MSVDNIFLMKNEIKEYDWGGYGFIPSLLGQKKDGLPKAEMWLGAHKTFSSKILVDGQYVSLFNFLEIHKELLGFGSELSF LFKILSVHKPLSLQIHPSKDIALKGFALENNKKIVIDDSKRIYKDENPKVELVYALSDFYALKGFLPLDGINHIYRSLGL DFNFMTHESFVKTLFDLHEFEIENIIYKVLDNLNFIDEFRAFWFNEIYKMYGIDIGLLVFLGMYIFKLKTGEVFYTESRE VHAYLKGECIELMTNSDNVIRAGFTTKHIDKDEMLKVGKFEEGVFSLLKSENIDGCDVFKLPGTNLSLFHKCIGGESYFE RVGVMILLVIKGKVQLNNRISLKMGDSVFIGNCDCNKELSICGNGEIFIALSL
Sequences:
>Translated_373_residues MSVDNIFLMKNEIKEYDWGGYGFIPSLLGQKKDGLPKAEMWLGAHKTFSSKILVDGQYVSLFNFLEIHKELLGFGSELSF LFKILSVHKPLSLQIHPSKDIALKGFALENNKKIVIDDSKRIYKDENPKVELVYALSDFYALKGFLPLDGINHIYRSLGL DFNFMTHESFVKTLFDLHEFEIENIIYKVLDNLNFIDEFRAFWFNEIYKMYGIDIGLLVFLGMYIFKLKTGEVFYTESRE VHAYLKGECIELMTNSDNVIRAGFTTKHIDKDEMLKVGKFEEGVFSLLKSENIDGCDVFKLPGTNLSLFHKCIGGESYFE RVGVMILLVIKGKVQLNNRISLKMGDSVFIGNCDCNKELSICGNGEIFIALSL >Mature_372_residues SVDNIFLMKNEIKEYDWGGYGFIPSLLGQKKDGLPKAEMWLGAHKTFSSKILVDGQYVSLFNFLEIHKELLGFGSELSFL FKILSVHKPLSLQIHPSKDIALKGFALENNKKIVIDDSKRIYKDENPKVELVYALSDFYALKGFLPLDGINHIYRSLGLD FNFMTHESFVKTLFDLHEFEIENIIYKVLDNLNFIDEFRAFWFNEIYKMYGIDIGLLVFLGMYIFKLKTGEVFYTESREV HAYLKGECIELMTNSDNVIRAGFTTKHIDKDEMLKVGKFEEGVFSLLKSENIDGCDVFKLPGTNLSLFHKCIGGESYFER VGVMILLVIKGKVQLNNRISLKMGDSVFIGNCDCNKELSICGNGEIFIALSL
Specific function: Involved in the conversion of glucose to GDP-L-fucose, which can be converted to L-fucose, a capsular polysaccharide [H]
COG id: COG1482
COG function: function code G; Phosphomannose isomerase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 1 family [H]
Homologues:
Organism=Homo sapiens, GI4505235, Length=413, Percent_Identity=27.3607748184019, Blast_Score=127, Evalue=2e-29, Organism=Escherichia coli, GI1787899, Length=388, Percent_Identity=30.9278350515464, Blast_Score=161, Evalue=7e-41, Organism=Caenorhabditis elegans, GI71997620, Length=392, Percent_Identity=28.0612244897959, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI21356061, Length=295, Percent_Identity=29.1525423728814, Blast_Score=113, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR001250 - InterPro: IPR016305 - InterPro: IPR018050 - InterPro: IPR014710 [H]
Pfam domain/function: PF01238 PMI_typeI [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 42655; Mature: 42524
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDNIFLMKNEIKEYDWGGYGFIPSLLGQKKDGLPKAEMWLGAHKTFSSKILVDGQYVS CCCCCEEEEEHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEECCHHHH LFNFLEIHKELLGFGSELSFLFKILSVHKPLSLQIHPSKDIALKGFALENNKKIVIDDSK HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEECCCEEEEECCH RIYKDENPKVELVYALSDFYALKGFLPLDGINHIYRSLGLDFNFMTHESFVKTLFDLHEF HHCCCCCCCEEEEEEEHHHHHHHCCCCCCHHHHHHHHHCCCEEEECHHHHHHHHHHHHHH EIENIIYKVLDNLNFIDEFRAFWFNEIYKMYGIDIGLLVFLGMYIFKLKTGEVFYTESRE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCEEEECCCE VHAYLKGECIELMTNSDNVIRAGFTTKHIDKDEMLKVGKFEEGVFSLLKSENIDGCDVFK EEEEECCCEEEEEECCCCEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCEEEE LPGTNLSLFHKCIGGESYFERVGVMILLVIKGKVQLNNRISLKMGDSVFIGNCDCNKELS ECCCCHHHHHHHHCCHHHHHHHHHEEEEEEECEEEECCEEEEEECCEEEEECCCCCCCEE ICGNGEIFIALSL EECCCCEEEEEEC >Mature Secondary Structure SVDNIFLMKNEIKEYDWGGYGFIPSLLGQKKDGLPKAEMWLGAHKTFSSKILVDGQYVS CCCCEEEEEHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEECCHHHH LFNFLEIHKELLGFGSELSFLFKILSVHKPLSLQIHPSKDIALKGFALENNKKIVIDDSK HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEECCCEEEEECCH RIYKDENPKVELVYALSDFYALKGFLPLDGINHIYRSLGLDFNFMTHESFVKTLFDLHEF HHCCCCCCCEEEEEEEHHHHHHHCCCCCCHHHHHHHHHCCCEEEECHHHHHHHHHHHHHH EIENIIYKVLDNLNFIDEFRAFWFNEIYKMYGIDIGLLVFLGMYIFKLKTGEVFYTESRE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCEEEECCCE VHAYLKGECIELMTNSDNVIRAGFTTKHIDKDEMLKVGKFEEGVFSLLKSENIDGCDVFK EEEEECCCEEEEEECCCCEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCEEEE LPGTNLSLFHKCIGGESYFERVGVMILLVIKGKVQLNNRISLKMGDSVFIGNCDCNKELS ECCCCHHHHHHHHCCHHHHHHHHHEEEEEEECEEEECCEEEEEECCEEEEECCCCCCCEE ICGNGEIFIALSL EECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1879695; 11677609 [H]