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The map label for this gene is ctp [H]

Identifier: 203284274

GI number: 203284274

Start: 381282

End: 382766

Strand: Reverse

Name: ctp [H]

Synonym: BDU_356

Alternate gene names: 203284274

Gene position: 382766-381282 (Counterclockwise)

Preceding gene: 203284281

Following gene: 203284273

Centisome position: 41.08

GC content: 30.17

Gene sequence:

>1485_bases
TTGTGTAGGAATTTTTCAATGAAAAAGAAATTTTTGGTATTTTTATACGTTGTATTAGCTTTAGTTATCAGTTCTTCAGT
TATTGTAGAGTCTATTTTTGCTCAAGCAAATTCTTCTAAGAGCAATTTGTCTGCGTCAAGTTATGGTCAGATGATGATGG
AGGCTTTTAATTTTATTAAGAAAAATTATGTTGAACCTATTGATGATGAGGCTGTTTTTGAAGGGGCTTTACAGGGTATG
TTTAAGGCATTAAATGATCCTTATTCTCAGTATTTGACAAAAAAAGATTTAGTAGAGATTTCAAAAACTACTGAGGGAAA
TTATGTGGGAATTGGGGTTGTTATTGCAAAAAAGGAGATTTCTAAAAAGTCTAACAATACTGCTTCTGATGTTCCTTATA
TAATGATTATTAATGCTTTTGAAGAAGGACCTGCTTATAGAGCTGGTGTTCGCTCTGGTGATTATATTAAGGCTATTGAT
GGTAATAGTACTGATTCTATGACAATAGAGCAGGTTAGCGAGCTTTTAAAGGGAAAAGCGGGTACAAAAGTTAAAATTTC
TATTTTGAGAAATAAAAATTTAGAACTTGAATATGATCTTGTGAGAGAAAAAATAGATATAGAAACAATTAAATATAGTG
TTATTAATAATGATGTCGGATATATTAGGATATTAAGTTTTAATCCAAGTACTAATATTTACTTTAAAAAAGCTTTTGAA
AAACTTAAATTGCAAAATATCAACTCTTTAATTTTAGATTTAAGGCTTAATCTTGGAGGTTATCTTACCGATGCAATAGA
AATTGCAAATGATATTTTGGCTGAAGGACTCATTGTATCAACAAAGGCAAGAGATTTTAAAATACCTTTAGAATATGTCA
CAAGGGAGTATAGAGCCGATTCTTCACATATAGTACCTTTAGATATGCCAATTGTTGCTTTGATTGATAAATATTCAGCA
TCAGCTTCGGAAGTTTTAGTTGGAGCTTTAAGAGATAATCAAAGAGTGTATGTTATAGGTGAAAAATCTTATGGAAAAGG
AGTGATTCAGCGTATAGTGCCTTTCCATACAGGAGGATTTAAGATTACGCATTCAAAATATTATACCCCTTCTGGACAGA
GTATTCATAATGTTGGTATTAAACCTGATTTGGAGATTAAGGAAAGAGAATTATCTGAAGTTGAATTTGGAGTTTATACC
CGAATGCTTAATGAGGAGGCTATAGAAAAGTTTTTAAATAGCAAGATAAATAAAAAATCGCTTTCTGAGAAAGAGGTAGA
TATTTTTGTGGATAAATTTCTTGAAACTTCTTATGTAAAGGCTGGTAAGGATATTAGTAATATAGATAAGAAAGCTTTGG
GGCGTTATTTGTTTTTGCAATTTTATCAAGATATACACCATAATCAGCCAATTTATAATTTATATTATGATGAAGTCTTG
AAAACTGCTTATGAATATCTTGTAAAGAAAGGGACACAAAATTAA

Upstream 100 bases:

>100_bases
TTGCGATAATGAGAGTTATGATTATTCTTTTTGTTTTTAAGCTATTTATCTTTAACATAATCTTAAAATATTATATTATG
AAGATAAAATCAAGTTTTAT

Downstream 100 bases:

>100_bases
TTTGTGAAACAAATAGTTTTAGATTATAGTTGTCTATTTGATGATGACATCATTATTGATGATATTAAGATTTATCACTA
TCTTGTTAATGTAAGAAGAT

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MCRNFSMKKKFLVFLYVVLALVISSSVIVESIFAQANSSKSNLSASSYGQMMMEAFNFIKKNYVEPIDDEAVFEGALQGM
FKALNDPYSQYLTKKDLVEISKTTEGNYVGIGVVIAKKEISKKSNNTASDVPYIMIINAFEEGPAYRAGVRSGDYIKAID
GNSTDSMTIEQVSELLKGKAGTKVKISILRNKNLELEYDLVREKIDIETIKYSVINNDVGYIRILSFNPSTNIYFKKAFE
KLKLQNINSLILDLRLNLGGYLTDAIEIANDILAEGLIVSTKARDFKIPLEYVTREYRADSSHIVPLDMPIVALIDKYSA
SASEVLVGALRDNQRVYVIGEKSYGKGVIQRIVPFHTGGFKITHSKYYTPSGQSIHNVGIKPDLEIKERELSEVEFGVYT
RMLNEEAIEKFLNSKINKKSLSEKEVDIFVDKFLETSYVKAGKDISNIDKKALGRYLFLQFYQDIHHNQPIYNLYYDEVL
KTAYEYLVKKGTQN

Sequences:

>Translated_494_residues
MCRNFSMKKKFLVFLYVVLALVISSSVIVESIFAQANSSKSNLSASSYGQMMMEAFNFIKKNYVEPIDDEAVFEGALQGM
FKALNDPYSQYLTKKDLVEISKTTEGNYVGIGVVIAKKEISKKSNNTASDVPYIMIINAFEEGPAYRAGVRSGDYIKAID
GNSTDSMTIEQVSELLKGKAGTKVKISILRNKNLELEYDLVREKIDIETIKYSVINNDVGYIRILSFNPSTNIYFKKAFE
KLKLQNINSLILDLRLNLGGYLTDAIEIANDILAEGLIVSTKARDFKIPLEYVTREYRADSSHIVPLDMPIVALIDKYSA
SASEVLVGALRDNQRVYVIGEKSYGKGVIQRIVPFHTGGFKITHSKYYTPSGQSIHNVGIKPDLEIKERELSEVEFGVYT
RMLNEEAIEKFLNSKINKKSLSEKEVDIFVDKFLETSYVKAGKDISNIDKKALGRYLFLQFYQDIHHNQPIYNLYYDEVL
KTAYEYLVKKGTQN
>Mature_494_residues
MCRNFSMKKKFLVFLYVVLALVISSSVIVESIFAQANSSKSNLSASSYGQMMMEAFNFIKKNYVEPIDDEAVFEGALQGM
FKALNDPYSQYLTKKDLVEISKTTEGNYVGIGVVIAKKEISKKSNNTASDVPYIMIINAFEEGPAYRAGVRSGDYIKAID
GNSTDSMTIEQVSELLKGKAGTKVKISILRNKNLELEYDLVREKIDIETIKYSVINNDVGYIRILSFNPSTNIYFKKAFE
KLKLQNINSLILDLRLNLGGYLTDAIEIANDILAEGLIVSTKARDFKIPLEYVTREYRADSSHIVPLDMPIVALIDKYSA
SASEVLVGALRDNQRVYVIGEKSYGKGVIQRIVPFHTGGFKITHSKYYTPSGQSIHNVGIKPDLEIKERELSEVEFGVYT
RMLNEEAIEKFLNSKINKKSLSEKEVDIFVDKFLETSYVKAGKDISNIDKKALGRYLFLQFYQDIHHNQPIYNLYYDEVL
KTAYEYLVKKGTQN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=342, Percent_Identity=28.6549707602339, Blast_Score=111, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 55904; Mature: 55904

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRNFSMKKKFLVFLYVVLALVISSSVIVESIFAQANSSKSNLSASSYGQMMMEAFNFIK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
KNYVEPIDDEAVFEGALQGMFKALNDPYSQYLTKKDLVEISKTTEGNYVGIGVVIAKKEI
HHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHH
SKKSNNTASDVPYIMIINAFEEGPAYRAGVRSGDYIKAIDGNSTDSMTIEQVSELLKGKA
HHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHCCCC
GTKVKISILRNKNLELEYDLVREKIDIETIKYSVINNDVGYIRILSFNPSTNIYFKKAFE
CCEEEEEEEECCCCCEEHHHHHHHHCHHHEEEEEECCCCCEEEEEEECCCCCCHHHHHHH
KLKLQNINSLILDLRLNLGGYLTDAIEIANDILAEGLIVSTKARDFKIPLEYVTREYRAD
HHHHHHHHHEEHHEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCC
SSHIVPLDMPIVALIDKYSASASEVLVGALRDNQRVYVIGEKSYGKGVIQRIVPFHTGGF
CCCEEECCCHHHHHHHHCCCCHHHHHHEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCE
KITHSKYYTPSGQSIHNVGIKPDLEIKERELSEVEFGVYTRMLNEEAIEKFLNSKINKKS
EEEECEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LSEKEVDIFVDKFLETSYVKAGKDISNIDKKALGRYLFLQFYQDIHHNQPIYNLYYDEVL
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
KTAYEYLVKKGTQN
HHHHHHHHHCCCCC
>Mature Secondary Structure
MCRNFSMKKKFLVFLYVVLALVISSSVIVESIFAQANSSKSNLSASSYGQMMMEAFNFIK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
KNYVEPIDDEAVFEGALQGMFKALNDPYSQYLTKKDLVEISKTTEGNYVGIGVVIAKKEI
HHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHH
SKKSNNTASDVPYIMIINAFEEGPAYRAGVRSGDYIKAIDGNSTDSMTIEQVSELLKGKA
HHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHCCCC
GTKVKISILRNKNLELEYDLVREKIDIETIKYSVINNDVGYIRILSFNPSTNIYFKKAFE
CCEEEEEEEECCCCCEEHHHHHHHHCHHHEEEEEECCCCCEEEEEEECCCCCCHHHHHHH
KLKLQNINSLILDLRLNLGGYLTDAIEIANDILAEGLIVSTKARDFKIPLEYVTREYRAD
HHHHHHHHHEEHHEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCC
SSHIVPLDMPIVALIDKYSASASEVLVGALRDNQRVYVIGEKSYGKGVIQRIVPFHTGGF
CCCEEECCCHHHHHHHHCCCCHHHHHHEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCE
KITHSKYYTPSGQSIHNVGIKPDLEIKERELSEVEFGVYTRMLNEEAIEKFLNSKINKKS
EEEECEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LSEKEVDIFVDKFLETSYVKAGKDISNIDKKALGRYLFLQFYQDIHHNQPIYNLYYDEVL
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
KTAYEYLVKKGTQN
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]