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The map label for this gene is gpsA [H]

Identifier: 203284281

GI number: 203284281

Start: 389191

End: 390243

Strand: Reverse

Name: gpsA [H]

Synonym: BDU_363

Alternate gene names: 203284281

Gene position: 390243-389191 (Counterclockwise)

Preceding gene: 203284282

Following gene: 203284274

Centisome position: 41.89

GC content: 28.96

Gene sequence:

>1053_bases
ATGAAAATATCTATTGTGGGAGCAGGGGCTTGGGGTACTGCTGTTGCTAAAGTTTTGGCAGATAAGTTTAAGGATCCTGT
TTTAATATGGTCTTTTGAAGAAGATGTTAGAGAGAGTATTAATAATAGCCATGAGAATACTAAGTATTTAAAAGGTATTA
AATTGCCAGATAATTTGATTGCAAGTTCTGATTTACTTGATATTGTAAATCAATCTGATTATATTTTTGTTGTAACCCCT
TCTCTTTATACTTTGAATGTTTTAAATAAATTGAAAAGTGTGCTTACTACTAAAAAGTTTAAGCTGGCAATATTAACAAA
AGGTTTTATAACAATTGATGATAAACCTTGTACTATTATAGAGGTTGCAGAAGGTGTTTTAAGAGAATATAAGGATGAAA
TTACTTATATTGCAGGACCAAGTCATGCTGAGGAAGTTGGACTTGGAATTATTACGGGACTTGTTGCTGCTAGTAGGAAT
AGAGCCAATGCTTTTGAATTTATTAATTTATTTAGTGGTACTTCTATTTCTATGTTTTATAGTTATGATATTCTTGGTGT
TCAGGTGGCATCAGCTTTAAAAAATATATTTGCCATTGCATTTGGAATTTTGGATGAATGTAAAATTAAAGATCCAAATT
TGATAGGTAATAATACAGAGTCTTTTTTATTTTCTGTTTCTTTAAATGACATGAAAAATATTGCATTTAAGCTTGGATCT
TGCAATGAGGAAACATTTTTGTTTTTAGCTGGTTCTGGAGATTTAGATGTTACATGTAGAAGTATTTTTGGAAGAAATAG
AAGATTTGGTCGTGAAATCGTTGGCAAAAATATTTTGGAGGATTTTAGAGATATAGATGATCTAATAAGTAACATTAATA
AAATTGGTTATTTACCTGAAGGATTGGTTGCTGCTAGGGAAGTTGCTTTGCTTTTTAAATTTTTAGGTATTAGTTCAGAT
TTTCAAAACTTGGCAATGATAGTGTATAAGATTTTAAATAAAGAATTAAAACCAGAAGCAGTTATTGATTATATAAAAAA
TTTTAAATTTTAG

Upstream 100 bases:

>100_bases
GATTTTGAAAAAATTTAAAGAAAATGATAAGATTAGAATTTTTCTAGACGATACGATTAAATATGAGTTATTATAATTTT
ATGGTTATAAGGAGGTATAT

Downstream 100 bases:

>100_bases
GACCCAAATAGTTGGGTCTATTATTTTTTTTTATTTATCATATATATTATGTTGGTGTAAACATCGTCAATTATTGCAAA
ATTCATTACGATTTCTGTAA

Product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MKISIVGAGAWGTAVAKVLADKFKDPVLIWSFEEDVRESINNSHENTKYLKGIKLPDNLIASSDLLDIVNQSDYIFVVTP
SLYTLNVLNKLKSVLTTKKFKLAILTKGFITIDDKPCTIIEVAEGVLREYKDEITYIAGPSHAEEVGLGIITGLVAASRN
RANAFEFINLFSGTSISMFYSYDILGVQVASALKNIFAIAFGILDECKIKDPNLIGNNTESFLFSVSLNDMKNIAFKLGS
CNEETFLFLAGSGDLDVTCRSIFGRNRRFGREIVGKNILEDFRDIDDLISNINKIGYLPEGLVAAREVALLFKFLGISSD
FQNLAMIVYKILNKELKPEAVIDYIKNFKF

Sequences:

>Translated_350_residues
MKISIVGAGAWGTAVAKVLADKFKDPVLIWSFEEDVRESINNSHENTKYLKGIKLPDNLIASSDLLDIVNQSDYIFVVTP
SLYTLNVLNKLKSVLTTKKFKLAILTKGFITIDDKPCTIIEVAEGVLREYKDEITYIAGPSHAEEVGLGIITGLVAASRN
RANAFEFINLFSGTSISMFYSYDILGVQVASALKNIFAIAFGILDECKIKDPNLIGNNTESFLFSVSLNDMKNIAFKLGS
CNEETFLFLAGSGDLDVTCRSIFGRNRRFGREIVGKNILEDFRDIDDLISNINKIGYLPEGLVAAREVALLFKFLGISSD
FQNLAMIVYKILNKELKPEAVIDYIKNFKF
>Mature_350_residues
MKISIVGAGAWGTAVAKVLADKFKDPVLIWSFEEDVRESINNSHENTKYLKGIKLPDNLIASSDLLDIVNQSDYIFVVTP
SLYTLNVLNKLKSVLTTKKFKLAILTKGFITIDDKPCTIIEVAEGVLREYKDEITYIAGPSHAEEVGLGIITGLVAASRN
RANAFEFINLFSGTSISMFYSYDILGVQVASALKNIFAIAFGILDECKIKDPNLIGNNTESFLFSVSLNDMKNIAFKLGS
CNEETFLFLAGSGDLDVTCRSIFGRNRRFGREIVGKNILEDFRDIDDLISNINKIGYLPEGLVAAREVALLFKFLGISSD
FQNLAMIVYKILNKELKPEAVIDYIKNFKF

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI24307999, Length=297, Percent_Identity=31.3131313131313, Blast_Score=115, Evalue=6e-26,
Organism=Homo sapiens, GI33695088, Length=347, Percent_Identity=27.9538904899135, Blast_Score=110, Evalue=2e-24,
Organism=Escherichia coli, GI1790037, Length=319, Percent_Identity=29.7805642633229, Blast_Score=116, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI32564399, Length=363, Percent_Identity=27.5482093663912, Blast_Score=114, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI193210136, Length=371, Percent_Identity=27.2237196765499, Blast_Score=111, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI32564403, Length=371, Percent_Identity=27.2237196765499, Blast_Score=111, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI17507425, Length=367, Percent_Identity=25.0681198910082, Blast_Score=94, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6320181, Length=364, Percent_Identity=26.9230769230769, Blast_Score=95, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6324513, Length=368, Percent_Identity=24.7282608695652, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI17136200, Length=360, Percent_Identity=29.4444444444444, Blast_Score=111, Evalue=7e-25,
Organism=Drosophila melanogaster, GI17136204, Length=360, Percent_Identity=29.4444444444444, Blast_Score=111, Evalue=7e-25,
Organism=Drosophila melanogaster, GI17136202, Length=360, Percent_Identity=29.4444444444444, Blast_Score=111, Evalue=8e-25,
Organism=Drosophila melanogaster, GI45551945, Length=359, Percent_Identity=24.2339832869081, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI281362270, Length=220, Percent_Identity=26.8181818181818, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI22026922, Length=354, Percent_Identity=23.1638418079096, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24648969, Length=348, Percent_Identity=23.2758620689655, Blast_Score=75, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]

EC number: =1.1.1.94 [H]

Molecular weight: Translated: 38879; Mature: 38879

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISIVGAGAWGTAVAKVLADKFKDPVLIWSFEEDVRESINNSHENTKYLKGIKLPDNLI
CEEEEEECCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCCHHHHCCCCCCHHHH
ASSDLLDIVNQSDYIFVVTPSLYTLNVLNKLKSVLTTKKFKLAILTKGFITIDDKPCTII
HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEEEEEECCEEEECCCCCHHH
EVAEGVLREYKDEITYIAGPSHAEEVGLGIITGLVAASRNRANAFEFINLFSGTSISMFY
HHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEE
SYDILGVQVASALKNIFAIAFGILDECKIKDPNLIGNNTESFLFSVSLNDMKNIAFKLGS
EEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCC
CNEETFLFLAGSGDLDVTCRSIFGRNRRFGREIVGKNILEDFRDIDDLISNINKIGYLPE
CCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GLVAAREVALLFKFLGISSDFQNLAMIVYKILNKELKPEAVIDYIKNFKF
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKISIVGAGAWGTAVAKVLADKFKDPVLIWSFEEDVRESINNSHENTKYLKGIKLPDNLI
CEEEEEECCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCCHHHHCCCCCCHHHH
ASSDLLDIVNQSDYIFVVTPSLYTLNVLNKLKSVLTTKKFKLAILTKGFITIDDKPCTII
HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEEEEEECCEEEECCCCCHHH
EVAEGVLREYKDEITYIAGPSHAEEVGLGIITGLVAASRNRANAFEFINLFSGTSISMFY
HHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEE
SYDILGVQVASALKNIFAIAFGILDECKIKDPNLIGNNTESFLFSVSLNDMKNIAFKLGS
EEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCC
CNEETFLFLAGSGDLDVTCRSIFGRNRRFGREIVGKNILEDFRDIDDLISNINKIGYLPE
CCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GLVAAREVALLFKFLGISSDFQNLAMIVYKILNKELKPEAVIDYIKNFKF
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA