| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is 203284219
Identifier: 203284219
GI number: 203284219
Start: 320798
End: 321487
Strand: Reverse
Name: 203284219
Synonym: BDU_301
Alternate gene names: NA
Gene position: 321487-320798 (Counterclockwise)
Preceding gene: 203284220
Following gene: 203284218
Centisome position: 34.51
GC content: 27.97
Gene sequence:
>690_bases ATGAAGAGATGTGTATCGGTATTTTTGTTACTATGGGTTTCTTGTGGTGATGGAGCTAAAGAAAAATCAAATCTTGGACT TAGAATCAGAGAAGTGGAATTATCTGGTGGTGGTTCATTAGAAAAGGTAGAAGTTTATAAAGAATTTATTGATAGGGAAG AAAAAAATGTTTTAAAAATAATAAATTCTATTGATAAGAAGGCCAGGTTTTTTATCTTAATTGGTCTTGAGCTTATTAAG CTTGGTCAATATTTGCCTGCTATTGAATATTTAAATAAAAATTTAGAGTATGGACCCGATAATCATTTGTCTCATTTTTA TATAGGTGTTTCTTCTTATAATTTAGCTAAGGGAATGCAAACTCAAGACAAGATAGAGGAGTATTTTACTCTTGCTGAAA ATTCTTTTTTAAAATCGATATCTCTTAAAGATGATTTTAAGGAAGCAATTTTTGCTCTCTCTACTATGTATGTTTATGAT CTTGATAAGCAATTAGAAGCTAAAGGTTATTTAAGTAAACTTGAATTTATGGGAGAAAATTATTTTGAGTTTTTGATGTT AAGAGGTGCAAATTATTATTCTCTTGGTGATTTTAATAATGCTTTATTATTTTATAATAAAGCAAAAAGTAAGGCTTCAA CTCAAGAACAGATAGAGGGAGTTAGTAAAATAATAAATGATTTTAAGTAG
Upstream 100 bases:
>100_bases TAATTTTATAGCAAAATCAAAAAATGTGAATTATTTTGAAGATGATATTGATGTTCCCACATTTCTTAGAAATTTAAATA AGAAAAATGGCGACAATTGA
Downstream 100 bases:
>100_bases TTTTTATGTGCAAATTACTTTATGTTGATAATTTAAAATTTTTAAAGAGCAAAGAAAAGCTTAGGATTTTTAATAATTTT GATTTCAATGAACTTTGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MKRCVSVFLLLWVSCGDGAKEKSNLGLRIREVELSGGGSLEKVEVYKEFIDREEKNVLKIINSIDKKARFFILIGLELIK LGQYLPAIEYLNKNLEYGPDNHLSHFYIGVSSYNLAKGMQTQDKIEEYFTLAENSFLKSISLKDDFKEAIFALSTMYVYD LDKQLEAKGYLSKLEFMGENYFEFLMLRGANYYSLGDFNNALLFYNKAKSKASTQEQIEGVSKIINDFK
Sequences:
>Translated_229_residues MKRCVSVFLLLWVSCGDGAKEKSNLGLRIREVELSGGGSLEKVEVYKEFIDREEKNVLKIINSIDKKARFFILIGLELIK LGQYLPAIEYLNKNLEYGPDNHLSHFYIGVSSYNLAKGMQTQDKIEEYFTLAENSFLKSISLKDDFKEAIFALSTMYVYD LDKQLEAKGYLSKLEFMGENYFEFLMLRGANYYSLGDFNNALLFYNKAKSKASTQEQIEGVSKIINDFK >Mature_229_residues MKRCVSVFLLLWVSCGDGAKEKSNLGLRIREVELSGGGSLEKVEVYKEFIDREEKNVLKIINSIDKKARFFILIGLELIK LGQYLPAIEYLNKNLEYGPDNHLSHFYIGVSSYNLAKGMQTQDKIEEYFTLAENSFLKSISLKDDFKEAIFALSTMYVYD LDKQLEAKGYLSKLEFMGENYFEFLMLRGANYYSLGDFNNALLFYNKAKSKASTQEQIEGVSKIINDFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00515 TPR_1 [H]
EC number: NA
Molecular weight: Translated: 26319; Mature: 26319
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRCVSVFLLLWVSCGDGAKEKSNLGLRIREVELSGGGSLEKVEVYKEFIDREEKNVLKI CHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHH INSIDKKARFFILIGLELIKLGQYLPAIEYLNKNLEYGPDNHLSHFYIGVSSYNLAKGMQ HHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHCCC TQDKIEEYFTLAENSFLKSISLKDDFKEAIFALSTMYVYDLDKQLEAKGYLSKLEFMGEN HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCH YFEFLMLRGANYYSLGDFNNALLFYNKAKSKASTQEQIEGVSKIINDFK HHHHHHHCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRCVSVFLLLWVSCGDGAKEKSNLGLRIREVELSGGGSLEKVEVYKEFIDREEKNVLKI CHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHH INSIDKKARFFILIGLELIKLGQYLPAIEYLNKNLEYGPDNHLSHFYIGVSSYNLAKGMQ HHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHCCC TQDKIEEYFTLAENSFLKSISLKDDFKEAIFALSTMYVYDLDKQLEAKGYLSKLEFMGEN HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCH YFEFLMLRGANYYSLGDFNNALLFYNKAKSKASTQEQIEGVSKIINDFK HHHHHHHCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]