| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
Click here to switch to the map view.
The map label for this gene is cdsA [H]
Identifier: 203284044
GI number: 203284044
Start: 128463
End: 129428
Strand: Reverse
Name: cdsA [H]
Synonym: BDU_122
Alternate gene names: 203284044
Gene position: 129428-128463 (Counterclockwise)
Preceding gene: 203284045
Following gene: 203284043
Centisome position: 13.89
GC content: 26.71
Gene sequence:
>966_bases TTGCTTATTGTGAATTTATTTTTTCAAATGTTTTATGGCCAGATTATTTTGTTTTTCATTATGAGAGAGATTTGGAATGT TTTAAGAATAGGAAGAGAAACTTTGGGAGATAAAGGTTTATTTAGTATTAGGTCTAAAAAGTTGACATTTGTTGCTAGAC TTGGAACATTTTTATTTTTTGTTCCTTTGGTCTTGCTTTTAATATTTTTAGAGTTTAAGAGTTATTTATTCATTAATATT TTAATTTTTATGTTTAGTGGAATTGCTGCAAAAGAAGTTAATGATTTGCTTAAATTTAAGTCTGCTTCTGTTTCTAGTAC TTTATCTTTCTTTTTAGGAATATTCCCTCCAATTTTGACATATGTGCATTTTAATATTTTAGATTTAGGCATTAATATAG TATTTTATTTAGTTATAACTTTGGTTTTTAGTAACTGGATTGTCAATTTGGTTTTTATTAAAGAAAATGAAATTGTTAAT TTTTTATCACAAGCAACTTCTATAATTTTTATACTCATATATCCAGGTATTTTGATGTCATTTGTTGTTGCTATTACTAC TTTGCCAAAAGCACCTATTCTTTTATTAATACTTTTTTCTATGGTTAGTGGTAATGATACTTTTGCTTATCTTTTTGGAT ATTTCTTTGGAAAAAATAGTTATAAGCCCACTATTATTAGTCCTAATAAGACTATAATGGGATTTTTTGGTGGTATACTA TTTTCTGTCATTGTTGTACTTATTGTAGTAAGCTTAGGATTGATAAATTTAACTTATGGAGAGGCTATGGTTTTTGGAGT TTTAATAGGATTTTTTACTATTATTGGTGATTTGTTTGAATCTGGACTTAAGCGTAGTGCAGGAGTTAAAGATTCTGGTA AAATTATTCCTGGTAGAGGTGGTGCTCTTGATTCAATTGATTCATATCTCTTAACAGGTCCTATATTTTATTTATATTTG TCGTAG
Upstream 100 bases:
>100_bases GAATTTGCTAAGTTTTTAGATAATCAAGAACTTGGTGATCTTGATCTCTTAATTCGAACAGGTGGAGATATGAGAGTAAG TAATTTTCTTTTATGGAGAC
Downstream 100 bases:
>100_bases TTTTGGGGAGTCATTAATGTATATTTTTTTTAGTATTTTAGCTTTCACTTTTATAATATTCATTCATGAGTTGGGGCATT TATTTTTTGCAAGACTTTTT
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MLIVNLFFQMFYGQIILFFIMREIWNVLRIGRETLGDKGLFSIRSKKLTFVARLGTFLFFVPLVLLLIFLEFKSYLFINI LIFMFSGIAAKEVNDLLKFKSASVSSTLSFFLGIFPPILTYVHFNILDLGINIVFYLVITLVFSNWIVNLVFIKENEIVN FLSQATSIIFILIYPGILMSFVVAITTLPKAPILLLILFSMVSGNDTFAYLFGYFFGKNSYKPTIISPNKTIMGFFGGIL FSVIVVLIVVSLGLINLTYGEAMVFGVLIGFFTIIGDLFESGLKRSAGVKDSGKIIPGRGGALDSIDSYLLTGPIFYLYL S
Sequences:
>Translated_321_residues MLIVNLFFQMFYGQIILFFIMREIWNVLRIGRETLGDKGLFSIRSKKLTFVARLGTFLFFVPLVLLLIFLEFKSYLFINI LIFMFSGIAAKEVNDLLKFKSASVSSTLSFFLGIFPPILTYVHFNILDLGINIVFYLVITLVFSNWIVNLVFIKENEIVN FLSQATSIIFILIYPGILMSFVVAITTLPKAPILLLILFSMVSGNDTFAYLFGYFFGKNSYKPTIISPNKTIMGFFGGIL FSVIVVLIVVSLGLINLTYGEAMVFGVLIGFFTIIGDLFESGLKRSAGVKDSGKIIPGRGGALDSIDSYLLTGPIFYLYL S >Mature_321_residues MLIVNLFFQMFYGQIILFFIMREIWNVLRIGRETLGDKGLFSIRSKKLTFVARLGTFLFFVPLVLLLIFLEFKSYLFINI LIFMFSGIAAKEVNDLLKFKSASVSSTLSFFLGIFPPILTYVHFNILDLGINIVFYLVITLVFSNWIVNLVFIKENEIVN FLSQATSIIFILIYPGILMSFVVAITTLPKAPILLLILFSMVSGNDTFAYLFGYFFGKNSYKPTIISPNKTIMGFFGGIL FSVIVVLIVVSLGLINLTYGEAMVFGVLIGFFTIIGDLFESGLKRSAGVKDSGKIIPGRGGALDSIDSYLLTGPIFYLYL S
Specific function: Unknown
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=124, Percent_Identity=37.9032258064516, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1787677, Length=117, Percent_Identity=41.8803418803419, Blast_Score=89, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 35990; Mature: 35990
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIVNLFFQMFYGQIILFFIMREIWNVLRIGRETLGDKGLFSIRSKKLTFVARLGTFLFF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH VPLVLLLIFLEFKSYLFINILIFMFSGIAAKEVNDLLKFKSASVSSTLSFFLGIFPPILT HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH YVHFNILDLGINIVFYLVITLVFSNWIVNLVFIKENEIVNFLSQATSIIFILIYPGILMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH FVVAITTLPKAPILLLILFSMVSGNDTFAYLFGYFFGKNSYKPTIISPNKTIMGFFGGIL HHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHH FSVIVVLIVVSLGLINLTYGEAMVFGVLIGFFTIIGDLFESGLKRSAGVKDSGKIIPGRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GALDSIDSYLLTGPIFYLYLS CCHHHHHHHHHHHHHEEEEEC >Mature Secondary Structure MLIVNLFFQMFYGQIILFFIMREIWNVLRIGRETLGDKGLFSIRSKKLTFVARLGTFLFF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH VPLVLLLIFLEFKSYLFINILIFMFSGIAAKEVNDLLKFKSASVSSTLSFFLGIFPPILT HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH YVHFNILDLGINIVFYLVITLVFSNWIVNLVFIKENEIVNFLSQATSIIFILIYPGILMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH FVVAITTLPKAPILLLILFSMVSGNDTFAYLFGYFFGKNSYKPTIISPNKTIMGFFGGIL HHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHH FSVIVVLIVVSLGLINLTYGEAMVFGVLIGFFTIIGDLFESGLKRSAGVKDSGKIIPGRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GALDSIDSYLLTGPIFYLYLS CCHHHHHHHHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA