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The map label for this gene is tpn39b [H]

Identifier: 203284033

GI number: 203284033

Start: 116887

End: 117897

Strand: Reverse

Name: tpn39b [H]

Synonym: BDU_111

Alternate gene names: 203284033

Gene position: 117897-116887 (Counterclockwise)

Preceding gene: 203284034

Following gene: 203284032

Centisome position: 12.65

GC content: 30.07

Gene sequence:

>1011_bases
ATGGGTAATTTTTTGTGTTTTTTGTTATTTTGTGTTTTAGGAATAACTTCTTTTGCTCAAAATACTCCTGTTGTAATCAT
TAATTTGCATAGTAATGAAATTATTACTAAAACAGAGTTTGAGTCTAAAGTTAATACATTGAAAAAAACACAAGGTAGAG
ATTTAAGTAATATTGAAAAAAAGCAAGTTTTACAGGTTTTAATTGCTGATGTACTTTTTGGTCAGGAAGCTTTAAAACAG
GGAATTAAAGTTGCAGATGATGAAGTTATGCAAACAATTAGATCTCAGTTTGGACTTGCAAGTCTTACCGATGAACAAAT
TAAGCAGATGATAGAAAGTCAAGGTACAAATTGGAATGAGCTTTTAGCTTCGATGAAAAGATCTCTTGCTGCGCAAAAAT
TAGTTCTAAAAATTGCTCAGCCCAAGTTTTCAGAGATAAAAGCTCCAAGTGAAAAAGAAGTAATTGAATATTATGAGGCT
AATAAAACTAAATTTGTGAATCCTGATATAGCGAGAATTAGTCATGTTTTCTTTTCGGCAAAAGATAAAAAAAGGTCAGA
GGTTCTTGAGCAGGCAAAAGATATTGCAAAGCAAATAAAATCTAGCAAGATTACTTTTGAAGAGGCTGTGAGAAAATATT
CAAATGATGAAGGTTCTAAGGTTAAAAATGGTGACCTTGGATTTTTGGCAAGGGGTGATCAAAGTGCTCAAAATGTTCTT
GGTGCAGACTTTATTAAAGAGGTTTTTGTTCTTAAAAAGGGAAATGTTTCTAATCCAATATCATCAAAGGAAGGTTTTCA
TATAGTGAAAGTTACTGAAATGTATTCTCAAAAATTTTTAGGTCTTCAAGATAAGATATCTCCTAATGTTAATATGACTG
TAAAGGATGCTATTAAAAATAATATGATTAATGTTCATCAACAGCAAATTGTTGCTAAAATACAACAAGAAATTTATGAT
AAACTCAATAAGTCTGCTAGTATACAAATTTTGGATTCTAGTCTAAAATGA

Upstream 100 bases:

>100_bases
ATATAGATAGATAATATTGTTTTGAAGCTAGATTTAAGTTTAATGTTTTGTTAAAATTTTATGAAGCGATTTAGTTTAAT
TTGATATAAGGGTAATTTTT

Downstream 100 bases:

>100_bases
AGATGATATATTTATATATTGGTTATGGATTTGAGACATAAGGCTAGGGTTTTAGCTTTTCAAAAAATTTACAGTATTGA
TGTTAACTGTAAGGCAAAGG

Product: basic membrane protein

Products: Isomerized Proline [C]

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MGNFLCFLLFCVLGITSFAQNTPVVIINLHSNEIITKTEFESKVNTLKKTQGRDLSNIEKKQVLQVLIADVLFGQEALKQ
GIKVADDEVMQTIRSQFGLASLTDEQIKQMIESQGTNWNELLASMKRSLAAQKLVLKIAQPKFSEIKAPSEKEVIEYYEA
NKTKFVNPDIARISHVFFSAKDKKRSEVLEQAKDIAKQIKSSKITFEEAVRKYSNDEGSKVKNGDLGFLARGDQSAQNVL
GADFIKEVFVLKKGNVSNPISSKEGFHIVKVTEMYSQKFLGLQDKISPNVNMTVKDAIKNNMINVHQQQIVAKIQQEIYD
KLNKSASIQILDSSLK

Sequences:

>Translated_336_residues
MGNFLCFLLFCVLGITSFAQNTPVVIINLHSNEIITKTEFESKVNTLKKTQGRDLSNIEKKQVLQVLIADVLFGQEALKQ
GIKVADDEVMQTIRSQFGLASLTDEQIKQMIESQGTNWNELLASMKRSLAAQKLVLKIAQPKFSEIKAPSEKEVIEYYEA
NKTKFVNPDIARISHVFFSAKDKKRSEVLEQAKDIAKQIKSSKITFEEAVRKYSNDEGSKVKNGDLGFLARGDQSAQNVL
GADFIKEVFVLKKGNVSNPISSKEGFHIVKVTEMYSQKFLGLQDKISPNVNMTVKDAIKNNMINVHQQQIVAKIQQEIYD
KLNKSASIQILDSSLK
>Mature_335_residues
GNFLCFLLFCVLGITSFAQNTPVVIINLHSNEIITKTEFESKVNTLKKTQGRDLSNIEKKQVLQVLIADVLFGQEALKQG
IKVADDEVMQTIRSQFGLASLTDEQIKQMIESQGTNWNELLASMKRSLAAQKLVLKIAQPKFSEIKAPSEKEVIEYYEAN
KTKFVNPDIARISHVFFSAKDKKRSEVLEQAKDIAKQIKSSKITFEEAVRKYSNDEGSKVKNGDLGFLARGDQSAQNVLG
ADFIKEVFVLKKGNVSNPISSKEGFHIVKVTEMYSQKFLGLQDKISPNVNMTVKDAIKNNMINVHQQQIVAKIQQEIYDK
LNKSASIQILDSSLK

Specific function: Assist In The Folding Of Extracytoplasmic Proteins. Essential For The Survival Of E.Coli In Stationary Phase. [C]

COG id: COG0760

COG function: function code O; Parvulin-like peptidyl-prolyl isomerase

Gene ontology:

Cell location: Cell membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008880 [H]

Pfam domain/function: NA

EC number: 5.2.1.8 [C]

Molecular weight: Translated: 37722; Mature: 37591

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50198 PPIC_PPIASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNFLCFLLFCVLGITSFAQNTPVVIINLHSNEIITKTEFESKVNTLKKTQGRDLSNIEK
CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHCCCCHHHHHH
KQVLQVLIADVLFGQEALKQGIKVADDEVMQTIRSQFGLASLTDEQIKQMIESQGTNWNE
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHH
LLASMKRSLAAQKLVLKIAQPKFSEIKAPSEKEVIEYYEANKTKFVNPDIARISHVFFSA
HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHCCCCEECCCHHHHHHHHHHCC
KDKKRSEVLEQAKDIAKQIKSSKITFEEAVRKYSNDEGSKVKNGDLGFLARGDQSAQNVL
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHHH
GADFIKEVFVLKKGNVSNPISSKEGFHIVKVTEMYSQKFLGLQDKISPNVNMTVKDAIKN
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCHHCCCCCCCEEHHHHHHC
NMINVHQQQIVAKIQQEIYDKLNKSASIQILDSSLK
CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
>Mature Secondary Structure 
GNFLCFLLFCVLGITSFAQNTPVVIINLHSNEIITKTEFESKVNTLKKTQGRDLSNIEK
CHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHCCCCHHHHHH
KQVLQVLIADVLFGQEALKQGIKVADDEVMQTIRSQFGLASLTDEQIKQMIESQGTNWNE
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHH
LLASMKRSLAAQKLVLKIAQPKFSEIKAPSEKEVIEYYEANKTKFVNPDIARISHVFFSA
HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHCCCCEECCCHHHHHHHHHHCC
KDKKRSEVLEQAKDIAKQIKSSKITFEEAVRKYSNDEGSKVKNGDLGFLARGDQSAQNVL
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHHH
GADFIKEVFVLKKGNVSNPISSKEGFHIVKVTEMYSQKFLGLQDKISPNVNMTVKDAIKN
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCHHCCCCCCCEEHHHHHHC
NMINVHQQQIVAKIQQEIYDKLNKSASIQILDSSLK
CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proline Imidic Peptide Bonds In Oligopeptides [C]

Specific reaction: Cis-Trans Isomerization Of Proline Imidic Peptide Bonds In Oligopeptides. [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3552988; 9665876 [H]