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The map label for this gene is FtsY [C]

Identifier: 20095049

GI number: 20095049

Start: 1620719

End: 1621768

Strand: Reverse

Name: FtsY [C]

Synonym: MK1613

Alternate gene names: 20095049

Gene position: 1621768-1620719 (Counterclockwise)

Preceding gene: 20095050

Following gene: 20095048

Centisome position: 95.68

GC content: 57.52

Gene sequence:

>1050_bases
GTGCCTTCGAGCTTGTTCGGCAAGATGAAGAGCGTTCTAAGCAAGGTAAAGGAGAAGGTGGCGAAGCGCGTGGAGGAGCG
CGCAGAGGAGGCCGAGGAAGCAAAAGTTAAGGAAGTCGAAACGATGCCGGAGGACCTCAAGAAGCCCACGTTGAAGGAAC
GCCTGAAGAGGGTGGTCAAGCGTGAGGTTACGATCACAGAGGCCGACATCGAGGACATCCTCGACGAGCTGGAGCTGGAA
CTCATAAGCAACGACGTCGCGGTTGAAGTCGCCGAGAGCATCCGGGAGGAGCTCAAGAAAGAGCTGGTCGGCCGTCGGGT
TAAGGGTAAATCGGAGATTCCTAAGGTCGTAGAGGAGGGCTTCCGCGAAGCGCTCCTATCGGTACTCGAGCCGAAGAAAG
AGGTCGATCTCATGGAGACCGTTGAGAAGGCCCGGCAAGATGGTCGACCGGCCATCATCATGTTCGTCGGTGTGAACGGG
AGCGGTAAGACCACCACCATCGCCAAGGTCGCGAAACTGCTCAAGGATCACGGTTACTCGGTCGTAATCGCCGCGGCCGA
CACGTTCCGGGCGGCCGCTATTGAACAGTTGGAGGAGCACGCGGAAAGACTCGGCGTCACCCTGATCAAGGGTGAGCGGG
GAGACGATCCGACGGCGGTGGCCTTCAACGCTGTGCAGCACGCGGAAGCGAAGGGGAAGGACGTCGTCCTCGTCGACACC
GCCGGACGGGCGTACACCGACGTTAACTTAATGGAAGAACTGAAAAAGATGAAGCGAGTTCTGGAACCGGATCTCGTCGT
ATTCGTAGGCGACGCACTGGCCGGAAACGACGCGATCGAGCAGGCTAAGACATTCCACGAATACGTGGGAATAGATTGCG
CGATACTGACTAAAGTCGACGCGGACGCCAAAGGTGGTGCCGTACTTTCTATATCGAAAGTTACGGGAGCCCCCATCCTG
TATCTGGGTGTCGGTCAGGATTACGACGACTTAAAGGCGTTCTCGCCGGAATGGTTCGTCGAGCGCGTAATTGGGGGGGA
AGAATCGTGA

Upstream 100 bases:

>100_bases
GGAAGGCACAAGAACTTGCGCAGCAGCTCGAAGGTGCCCAGCGGATCGCCCAGCAGTCCGGTGGAGGGTAATCCTTCCCG
AAACCCGACGTTTTTCGGGG

Downstream 100 bases:

>100_bases
TAGGATTCGCCGATAGGCTTGCTGAAATCACCAAGAAGATCAAAGGAGCCTCGATAATCGATGAGGATTTCGTTAAGGAG
GTGGTACGCGACGTTCAACG

Product: Signal recognition particle GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MPSSLFGKMKSVLSKVKEKVAKRVEERAEEAEEAKVKEVETMPEDLKKPTLKERLKRVVKREVTITEADIEDILDELELE
LISNDVAVEVAESIREELKKELVGRRVKGKSEIPKVVEEGFREALLSVLEPKKEVDLMETVEKARQDGRPAIIMFVGVNG
SGKTTTIAKVAKLLKDHGYSVVIAAADTFRAAAIEQLEEHAERLGVTLIKGERGDDPTAVAFNAVQHAEAKGKDVVLVDT
AGRAYTDVNLMEELKKMKRVLEPDLVVFVGDALAGNDAIEQAKTFHEYVGIDCAILTKVDADAKGGAVLSISKVTGAPIL
YLGVGQDYDDLKAFSPEWFVERVIGGEES

Sequences:

>Translated_349_residues
MPSSLFGKMKSVLSKVKEKVAKRVEERAEEAEEAKVKEVETMPEDLKKPTLKERLKRVVKREVTITEADIEDILDELELE
LISNDVAVEVAESIREELKKELVGRRVKGKSEIPKVVEEGFREALLSVLEPKKEVDLMETVEKARQDGRPAIIMFVGVNG
SGKTTTIAKVAKLLKDHGYSVVIAAADTFRAAAIEQLEEHAERLGVTLIKGERGDDPTAVAFNAVQHAEAKGKDVVLVDT
AGRAYTDVNLMEELKKMKRVLEPDLVVFVGDALAGNDAIEQAKTFHEYVGIDCAILTKVDADAKGGAVLSISKVTGAPIL
YLGVGQDYDDLKAFSPEWFVERVIGGEES
>Mature_348_residues
PSSLFGKMKSVLSKVKEKVAKRVEERAEEAEEAKVKEVETMPEDLKKPTLKERLKRVVKREVTITEADIEDILDELELEL
ISNDVAVEVAESIREELKKELVGRRVKGKSEIPKVVEEGFREALLSVLEPKKEVDLMETVEKARQDGRPAIIMFVGVNGS
GKTTTIAKVAKLLKDHGYSVVIAAADTFRAAAIEQLEEHAERLGVTLIKGERGDDPTAVAFNAVQHAEAKGKDVVLVDTA
GRAYTDVNLMEELKKMKRVLEPDLVVFVGDALAGNDAIEQAKTFHEYVGIDCAILTKVDADAKGGAVLSISKVTGAPILY
LGVGQDYDDLKAFSPEWFVERVIGGEES

Specific function: Probably involved in the signal sequence recognition [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI23308697, Length=296, Percent_Identity=36.8243243243243, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI295424842, Length=296, Percent_Identity=36.8243243243243, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI4507215, Length=289, Percent_Identity=29.757785467128, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI226371618, Length=198, Percent_Identity=35.3535353535354, Blast_Score=142, Evalue=4e-34,
Organism=Homo sapiens, GI89061728, Length=130, Percent_Identity=33.8461538461538, Blast_Score=91, Evalue=2e-18,
Organism=Escherichia coli, GI1788963, Length=306, Percent_Identity=36.2745098039216, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1789874, Length=205, Percent_Identity=44.8780487804878, Blast_Score=178, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI193206261, Length=292, Percent_Identity=40.7534246575342, Blast_Score=199, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17539958, Length=285, Percent_Identity=30.8771929824561, Blast_Score=165, Evalue=4e-41,
Organism=Saccharomyces cerevisiae, GI6320498, Length=325, Percent_Identity=32.6153846153846, Blast_Score=183, Evalue=4e-47,
Organism=Saccharomyces cerevisiae, GI6325345, Length=305, Percent_Identity=30.1639344262295, Blast_Score=149, Evalue=9e-37,
Organism=Drosophila melanogaster, GI24641198, Length=359, Percent_Identity=34.8189415041783, Blast_Score=197, Evalue=9e-51,
Organism=Drosophila melanogaster, GI17647949, Length=287, Percent_Identity=29.2682926829268, Blast_Score=147, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 38297; Mature: 38166

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSSLFGKMKSVLSKVKEKVAKRVEERAEEAEEAKVKEVETMPEDLKKPTLKERLKRVVK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHH
REVTITEADIEDILDELELELISNDVAVEVAESIREELKKELVGRRVKGKSEIPKVVEEG
HHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
FREALLSVLEPKKEVDLMETVEKARQDGRPAIIMFVGVNGSGKTTTIAKVAKLLKDHGYS
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCE
VVIAAADTFRAAAIEQLEEHAERLGVTLIKGERGDDPTAVAFNAVQHAEAKGKDVVLVDT
EEEEECHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEC
AGRAYTDVNLMEELKKMKRVLEPDLVVFVGDALAGNDAIEQAKTFHEYVGIDCAILTKVD
CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEC
ADAKGGAVLSISKVTGAPILYLGVGQDYDDLKAFSPEWFVERVIGGEES
CCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
PSSLFGKMKSVLSKVKEKVAKRVEERAEEAEEAKVKEVETMPEDLKKPTLKERLKRVVK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHH
REVTITEADIEDILDELELELISNDVAVEVAESIREELKKELVGRRVKGKSEIPKVVEEG
HHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
FREALLSVLEPKKEVDLMETVEKARQDGRPAIIMFVGVNGSGKTTTIAKVAKLLKDHGYS
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCE
VVIAAADTFRAAAIEQLEEHAERLGVTLIKGERGDDPTAVAFNAVQHAEAKGKDVVLVDT
EEEEECHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEC
AGRAYTDVNLMEELKKMKRVLEPDLVVFVGDALAGNDAIEQAKTFHEYVGIDCAILTKVD
CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEC
ADAKGGAVLSISKVTGAPILYLGVGQDYDDLKAFSPEWFVERVIGGEES
CCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]