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The map label for this gene is 20094969

Identifier: 20094969

GI number: 20094969

Start: 1544563

End: 1546239

Strand: Reverse

Name: 20094969

Synonym: MK1533

Alternate gene names: NA

Gene position: 1546239-1544563 (Counterclockwise)

Preceding gene: 20094971

Following gene: 20094956

Centisome position: 91.23

GC content: 62.79

Gene sequence:

>1677_bases
GTGCCACGGAGGTGTCGGCCCCCATCGCGCCGATACGGACTCAACTTTTATTTTCTTCATCTACCGTACGTTGTAGGTTC
GTTACGGTCCGGTTCATCGAGATTAAAGGTTTGGGGGAGCGAGCGCGTGCGCGTCCTAGTCGCCACGATAGCCGTTCTGA
TAACCGCCGCACCGACGACGGCGCTGGACTGGAAGAATACGGAGCCGTATAAGGAGCTCCAGACGGAGTGCGCGGACGCC
GTGAAAGCGGGCACCGTATGGTGGTTCATCACCACGGATCGCGGCGGTCCCTACTTGGCTTCGGCTCACTTGTGGAACCC
TCAGCTGACGTTCGGATACGAGCTGAAGGCGATCTCGCTGGTGTATCCCACGCTGGAAAGCGCGGAGCGCGCTGGATTAC
TAGCCGATAGGGTGCCCGCCGGTGTGCCGGCGATGACGCCGACGTCGGAGTGGTCTAAGGCTTCCGAGGAGGCCGTCAGG
TGGGTACTCGACAACCAGAACGAGGACGGCGGCTGGGGACAGGCGTGGACGTACAGGGGCATAACCCACTCGGGCAGTTT
AACCAGCGACACCGCGGTTGCGATCATGCTGCTGATCCACGAGATCGAGCGGCGACACGAGTCGGGTGGGGAATACGGGG
AGCTCGTGAGCGCCGTACGCAGGGGACTGACCTGGCTCCTGGACCAACAGCTGGAGGACGGTGGCTGGAGTAGGAAGAGG
GAGGAAGCCCGGGAAGGAGCTCCGTGGCACACCCGTGCGGCGGTCGCGGCGTTGTTGATGGCGTTGGAACGCCGTGACCT
GCTGAACCTCGACGACAGTGCGGTGGATCGGATCAAAAGCGCCATCGAGCGGGGAGTCTCCTGGCTGCTGGAGCGTCAGA
ACCCGGACGGATCTTGGTACTCCGGGCTGATGTGCCAAGAGTACTCGGCGGACACTCAGGCATACATCCTGTCGACTCTG
ATAGACGTCTACTTGAAGGCGGACCGGCTCGGGCTCCACGTGGACCGCGATCGGATCCTGAACGCCATCCGCAGGGGCAT
CGAGTGGCTCTTCAACGGTGAGGAAGCCGGAGTAACGTGGGTGGAAGGAAGTCACGGTCGGGGCCCCGCCTGGGCGTACT
CGTCGGCTTATCTAGAAGCGCAGGGATCGCCGGAGACGACCGTCACGGGGAACGTCCTGAGCCTCGTGCTGCTGAAGGCG
CTGTGGTTCGATGTCGCGACGGACGTGGAGATCGAGACGCCAGGCGGTAAGCGCAAGCTCTCGGATCTCGTGACGGACCC
GGAGTACAACCTCCACGCCACCGTCGAGTGGCTCGTATCCCAGCGGTACCGTGGGACCGAACACCCGGAGTGGTACGGAG
CCTGGCCGTGGCCGGCTCGGGATGTGACGTCCACGACCGAAGGGGCCCACTACGAACCGGCGTCGATATGGGCCACGGCC
TACGCGATGCGGGCGCTCGAGGCCTACCTGAACCCGGAGCTGTTTTACGGAAAAATAACGAAACCGAACGGGAACGAATC
AGTATCCAAGACCGAGCGTGAGACCGTGTCCGGAGGAACAGAAACAGAGGGGAACAAAAGACAAGAGAAGTCCAAGAGGG
GCGTACCCGTCCTATTGCCGGCCGTACCTCCTGTACGCCGCCAGCGTCAACGCGGCGGCCAGTACCGCCATCGGTGA

Upstream 100 bases:

>100_bases
TCCTCGGGTGATCCCTTCGCGGCGTTCCCGAATATCACAATGTCCAGCGAGTGCGCGGGGACCGAGACCGCTAGGAACAC
CATGACGAGGATCAAGACCG

Downstream 100 bases:

>100_bases
TACCGCGATCTTCCTACGCTCGAGCTTCTTCACGCGCTCTTCGAGGTTTTCTACGGTGTTCTTGCACTCGTCTATGCTGC
CCTTCAGGCCACTCACCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 557

Protein sequence:

>558_residues
MPRRCRPPSRRYGLNFYFLHLPYVVGSLRSGSSRLKVWGSERVRVLVATIAVLITAAPTTALDWKNTEPYKELQTECADA
VKAGTVWWFITTDRGGPYLASAHLWNPQLTFGYELKAISLVYPTLESAERAGLLADRVPAGVPAMTPTSEWSKASEEAVR
WVLDNQNEDGGWGQAWTYRGITHSGSLTSDTAVAIMLLIHEIERRHESGGEYGELVSAVRRGLTWLLDQQLEDGGWSRKR
EEAREGAPWHTRAAVAALLMALERRDLLNLDDSAVDRIKSAIERGVSWLLERQNPDGSWYSGLMCQEYSADTQAYILSTL
IDVYLKADRLGLHVDRDRILNAIRRGIEWLFNGEEAGVTWVEGSHGRGPAWAYSSAYLEAQGSPETTVTGNVLSLVLLKA
LWFDVATDVEIETPGGKRKLSDLVTDPEYNLHATVEWLVSQRYRGTEHPEWYGAWPWPARDVTSTTEGAHYEPASIWATA
YAMRALEAYLNPELFYGKITKPNGNESVSKTERETVSGGTETEGNKRQEKSKRGVPVLLPAVPPVRRQRQRGGQYRHR

Sequences:

>Translated_558_residues
MPRRCRPPSRRYGLNFYFLHLPYVVGSLRSGSSRLKVWGSERVRVLVATIAVLITAAPTTALDWKNTEPYKELQTECADA
VKAGTVWWFITTDRGGPYLASAHLWNPQLTFGYELKAISLVYPTLESAERAGLLADRVPAGVPAMTPTSEWSKASEEAVR
WVLDNQNEDGGWGQAWTYRGITHSGSLTSDTAVAIMLLIHEIERRHESGGEYGELVSAVRRGLTWLLDQQLEDGGWSRKR
EEAREGAPWHTRAAVAALLMALERRDLLNLDDSAVDRIKSAIERGVSWLLERQNPDGSWYSGLMCQEYSADTQAYILSTL
IDVYLKADRLGLHVDRDRILNAIRRGIEWLFNGEEAGVTWVEGSHGRGPAWAYSSAYLEAQGSPETTVTGNVLSLVLLKA
LWFDVATDVEIETPGGKRKLSDLVTDPEYNLHATVEWLVSQRYRGTEHPEWYGAWPWPARDVTSTTEGAHYEPASIWATA
YAMRALEAYLNPELFYGKITKPNGNESVSKTERETVSGGTETEGNKRQEKSKRGVPVLLPAVPPVRRQRQRGGQYRHR
>Mature_557_residues
PRRCRPPSRRYGLNFYFLHLPYVVGSLRSGSSRLKVWGSERVRVLVATIAVLITAAPTTALDWKNTEPYKELQTECADAV
KAGTVWWFITTDRGGPYLASAHLWNPQLTFGYELKAISLVYPTLESAERAGLLADRVPAGVPAMTPTSEWSKASEEAVRW
VLDNQNEDGGWGQAWTYRGITHSGSLTSDTAVAIMLLIHEIERRHESGGEYGELVSAVRRGLTWLLDQQLEDGGWSRKRE
EAREGAPWHTRAAVAALLMALERRDLLNLDDSAVDRIKSAIERGVSWLLERQNPDGSWYSGLMCQEYSADTQAYILSTLI
DVYLKADRLGLHVDRDRILNAIRRGIEWLFNGEEAGVTWVEGSHGRGPAWAYSSAYLEAQGSPETTVTGNVLSLVLLKAL
WFDVATDVEIETPGGKRKLSDLVTDPEYNLHATVEWLVSQRYRGTEHPEWYGAWPWPARDVTSTTEGAHYEPASIWATAY
AMRALEAYLNPELFYGKITKPNGNESVSKTERETVSGGTETEGNKRQEKSKRGVPVLLPAVPPVRRQRQRGGQYRHR

Specific function: Unknown

COG id: COG1657

COG function: function code I; Squalene cyclase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62583; Mature: 62452

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRRCRPPSRRYGLNFYFLHLPYVVGSLRSGSSRLKVWGSERVRVLVATIAVLITAAPTT
CCCCCCCCCHHCCCCEEEEEHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCC
ALDWKNTEPYKELQTECADAVKAGTVWWFITTDRGGPYLASAHLWNPQLTFGYELKAISL
CCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEEEECCCCEEECEEEEEEEE
VYPTLESAERAGLLADRVPAGVPAMTPTSEWSKASEEAVRWVLDNQNEDGGWGQAWTYRG
ECCCHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECC
ITHSGSLTSDTAVAIMLLIHEIERRHESGGEYGELVSAVRRGLTWLLDQQLEDGGWSRKR
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
EEAREGAPWHTRAAVAALLMALERRDLLNLDDSAVDRIKSAIERGVSWLLERQNPDGSWY
HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
SGLMCQEYSADTQAYILSTLIDVYLKADRLGLHVDRDRILNAIRRGIEWLFNGEEAGVTW
CCEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHCCCCCCCEEE
VEGSHGRGPAWAYSSAYLEAQGSPETTVTGNVLSLVLLKALWFDVATDVEIETPGGKRKL
EECCCCCCCCEEECCEEEEECCCCCCEECHHHHHHHHHHHHHHHHHCCEEEECCCCHHHH
SDLVTDPEYNLHATVEWLVSQRYRGTEHPEWYGAWPWPARDVTSTTEGAHYEPASIWATA
HHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
YAMRALEAYLNPELFYGKITKPNGNESVSKTERETVSGGTETEGNKRQEKSKRGVPVLLP
HHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEC
AVPPVRRQRQRGGQYRHR
CCCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PRRCRPPSRRYGLNFYFLHLPYVVGSLRSGSSRLKVWGSERVRVLVATIAVLITAAPTT
CCCCCCCCHHCCCCEEEEEHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCC
ALDWKNTEPYKELQTECADAVKAGTVWWFITTDRGGPYLASAHLWNPQLTFGYELKAISL
CCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEEEECCCCEEECEEEEEEEE
VYPTLESAERAGLLADRVPAGVPAMTPTSEWSKASEEAVRWVLDNQNEDGGWGQAWTYRG
ECCCHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECC
ITHSGSLTSDTAVAIMLLIHEIERRHESGGEYGELVSAVRRGLTWLLDQQLEDGGWSRKR
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
EEAREGAPWHTRAAVAALLMALERRDLLNLDDSAVDRIKSAIERGVSWLLERQNPDGSWY
HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
SGLMCQEYSADTQAYILSTLIDVYLKADRLGLHVDRDRILNAIRRGIEWLFNGEEAGVTW
CCEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHCCCCCCCEEE
VEGSHGRGPAWAYSSAYLEAQGSPETTVTGNVLSLVLLKALWFDVATDVEIETPGGKRKL
EECCCCCCCCEEECCEEEEECCCCCCEECHHHHHHHHHHHHHHHHHCCEEEECCCCHHHH
SDLVTDPEYNLHATVEWLVSQRYRGTEHPEWYGAWPWPARDVTSTTEGAHYEPASIWATA
HHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
YAMRALEAYLNPELFYGKITKPNGNESVSKTERETVSGGTETEGNKRQEKSKRGVPVLLP
HHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEC
AVPPVRRQRQRGGQYRHR
CCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA