| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094924
Identifier: 20094924
GI number: 20094924
Start: 1507688
End: 1508737
Strand: Direct
Name: 20094924
Synonym: MK1488
Alternate gene names: NA
Gene position: 1507688-1508737 (Clockwise)
Preceding gene: 20094918
Following gene: 20094925
Centisome position: 88.95
GC content: 63.24
Gene sequence:
>1050_bases ATGGAAGAGCCCGAGAACCTCGCCGTCGTGCCGCCGTCATGCGAAGCCGGACCGTGCGGTAACTCCTGCGTTTTCTGTTA CATCAGGCAGAACCCACCCGAGGTGCTCAGAGAGCACGGTGGAAACGTGGATACGACTCGTCACGACACGTTGAACGATC CGCACCTGGAGGAGCGCGTCGAGCGAGCCCGCGACCGGTACCCCGACCTCCGACTCAGGATCGTGGACACCGCGGGGAAC GTGGGAATCGACGAGGGACGCGTCGAGTCCCTGGCGGCGGCCGGGATAGACGAGGTTCAGATCTCGTTGCACACCACGGT TCCGGAGACGCGGAAGAAACTGATGGGGAACCCGAACGCGGACGAGTTGTTGGAGCTGCTACCGAAGTTCGAGGACGTCG GCATCGACGTCATCGCCGATCTAGTGCTCACTCCCGGATACAACCTCAGGGAGCTACCCCGCACGTGCGAAGACTTGGAG ACGATGGGGGCCAGGCAGGTCCGCGTGTTTCCGGTCGGAGGTACGGACCTCGCCCGTGGGTTCCGGTTCCCCACCCGGAG GGAGTTGGAGTGGATGCGAGAGACCTCCCGGCGATTGGATTGTGAGCTGAATATTGAGGTGATACCCTCACCTACGATCG ACGCGCTGCTAGGTGAACCCGCGTTCGACCCGCCGGATCTCCCGGAACCGGACTTCGAGGCCGTAATCGTCGTCGGTGAA CTGGCCGCTCCTATTTTCGAACCGGCGGTCCGAGAGCTGGAGAACGTCGAGCTGCTCGTGGTGAAGAACCGGGTGTTCGG CGGTGTGATCGGGGCGTCGAGCCTGCTCACCGCGAAGGACGTTCTGAGGGAGATCGAGCGTTACGAGCCTCGGACGGAGT TCCCGGTCCTGATCCTCCCCGACGCCATGTTCAGTCCCGACGGCAGGACACTCGACGGGTGGTCCCGCGAGGAGTTAGTG GGGAAGTTAGCGGCGCTCGGGTACACGGTGGTGACGTGCAGAAAACCCGAAGAGGTCGCGAAAGTCCTCGCATCCCCCTC ACCGTGGTGA
Upstream 100 bases:
>100_bases CAACCGCTAAGACGCGACATTATCGGGGGATTCGAAGATCCCGTACGAAATCGACGAGCGAGGGGTAGCGCACGAGATCG ACGAGATCGACTTAGACCTG
Downstream 100 bases:
>100_bases GCCCTCCGCAAACGCTCCCTTCGTCATCCGTCCGTCCGGGGTGGGCTCGTCATCGGGCGCGCGGCAAGCCTTTTGGTGGA CCCGCACCCGTCAGGTATGC
Product: NifB/MoaA family Fe-S oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MEEPENLAVVPPSCEAGPCGNSCVFCYIRQNPPEVLREHGGNVDTTRHDTLNDPHLEERVERARDRYPDLRLRIVDTAGN VGIDEGRVESLAAAGIDEVQISLHTTVPETRKKLMGNPNADELLELLPKFEDVGIDVIADLVLTPGYNLRELPRTCEDLE TMGARQVRVFPVGGTDLARGFRFPTRRELEWMRETSRRLDCELNIEVIPSPTIDALLGEPAFDPPDLPEPDFEAVIVVGE LAAPIFEPAVRELENVELLVVKNRVFGGVIGASSLLTAKDVLREIERYEPRTEFPVLILPDAMFSPDGRTLDGWSREELV GKLAALGYTVVTCRKPEEVAKVLASPSPW
Sequences:
>Translated_349_residues MEEPENLAVVPPSCEAGPCGNSCVFCYIRQNPPEVLREHGGNVDTTRHDTLNDPHLEERVERARDRYPDLRLRIVDTAGN VGIDEGRVESLAAAGIDEVQISLHTTVPETRKKLMGNPNADELLELLPKFEDVGIDVIADLVLTPGYNLRELPRTCEDLE TMGARQVRVFPVGGTDLARGFRFPTRRELEWMRETSRRLDCELNIEVIPSPTIDALLGEPAFDPPDLPEPDFEAVIVVGE LAAPIFEPAVRELENVELLVVKNRVFGGVIGASSLLTAKDVLREIERYEPRTEFPVLILPDAMFSPDGRTLDGWSREELV GKLAALGYTVVTCRKPEEVAKVLASPSPW >Mature_349_residues MEEPENLAVVPPSCEAGPCGNSCVFCYIRQNPPEVLREHGGNVDTTRHDTLNDPHLEERVERARDRYPDLRLRIVDTAGN VGIDEGRVESLAAAGIDEVQISLHTTVPETRKKLMGNPNADELLELLPKFEDVGIDVIADLVLTPGYNLRELPRTCEDLE TMGARQVRVFPVGGTDLARGFRFPTRRELEWMRETSRRLDCELNIEVIPSPTIDALLGEPAFDPPDLPEPDFEAVIVVGE LAAPIFEPAVRELENVELLVVKNRVFGGVIGASSLLTAKDVLREIERYEPRTEFPVLILPDAMFSPDGRTLDGWSREELV GKLAALGYTVVTCRKPEEVAKVLASPSPW
Specific function: Unknown
COG id: COG1625
COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38748; Mature: 38748
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEPENLAVVPPSCEAGPCGNSCVFCYIRQNPPEVLREHGGNVDTTRHDTLNDPHLEERV CCCCCCEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCHHHHHH ERARDRYPDLRLRIVDTAGNVGIDEGRVESLAAAGIDEVQISLHTTVPETRKKLMGNPNA HHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCH DELLELLPKFEDVGIDVIADLVLTPGYNLRELPRTCEDLETMGARQVRVFPVGGTDLARG HHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHC FRFPTRRELEWMRETSRRLDCELNIEVIPSPTIDALLGEPAFDPPDLPEPDFEAVIVVGE CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEHH LAAPIFEPAVRELENVELLVVKNRVFGGVIGASSLLTAKDVLREIERYEPRTEFPVLILP HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC DAMFSPDGRTLDGWSREELVGKLAALGYTVVTCRKPEEVAKVLASPSPW CCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCHHHHHHHHCCCCCC >Mature Secondary Structure MEEPENLAVVPPSCEAGPCGNSCVFCYIRQNPPEVLREHGGNVDTTRHDTLNDPHLEERV CCCCCCEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCHHHHHH ERARDRYPDLRLRIVDTAGNVGIDEGRVESLAAAGIDEVQISLHTTVPETRKKLMGNPNA HHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCH DELLELLPKFEDVGIDVIADLVLTPGYNLRELPRTCEDLETMGARQVRVFPVGGTDLARG HHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHC FRFPTRRELEWMRETSRRLDCELNIEVIPSPTIDALLGEPAFDPPDLPEPDFEAVIVVGE CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEHH LAAPIFEPAVRELENVELLVVKNRVFGGVIGASSLLTAKDVLREIERYEPRTEFPVLILP HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC DAMFSPDGRTLDGWSREELVGKLAALGYTVVTCRKPEEVAKVLASPSPW CCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA