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The map label for this gene is 20094922

Identifier: 20094922

GI number: 20094922

Start: 1506670

End: 1507077

Strand: Reverse

Name: 20094922

Synonym: MK1486

Alternate gene names: NA

Gene position: 1507077-1506670 (Counterclockwise)

Preceding gene: 20094923

Following gene: 20094921

Centisome position: 88.91

GC content: 63.97

Gene sequence:

>408_bases
GTGAGCGTGTCGCCGGTCCGCTGCGAGCCCGTCGTCGACGTCGAGGAGCCCGTGGAGGCGGAAGTCCTGGTATCCTCACA
ACGTCTTTCCTTCCTGGGCGGGGTGGACCCGAAAACGGGCGAGGTGGTCGATCCGTCCCACGAGCTCTGCGGGGAGAAGC
TGACGGGCCGTGTGCTGGTTCTACCCGGCGGACGTGGTTCCACCGTCGGATCGTACGTGTTGATGGAGATGGCGGATCGA
GGCACCGCACCGGCGGGTATCGTGGTGCGTGAAGCCGAACCGATCCTGGTGGTGGGGTGCGTTCTCGGGGATATCCCGCT
GTTTCACAGACCCGAGCGCGATCTCGTGGAAGAACTGAGCACGGGTGACGTCGTGAAGCTTCTACCCGGTGGGAAGGTAG
AAGTATAG

Upstream 100 bases:

>100_bases
GTCGCTGGTTAGAGCTGAACGTAGAGTACTACGATATCTCGGGGTGCAGCTGACGCCCCGATCGTTTTTTCGATGGTATC
CTCCGAGCACCACGTCCGGG

Downstream 100 bases:

>100_bases
GGCTCGGGAACGCCAGCCCACCTCATCCCGTTCGGCCGGACCCACTTCCTCATCGCCCCGGGTCGGACGAGGTCGCAACG
TTGAAAAGGTGCCGGTGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MSVSPVRCEPVVDVEEPVEAEVLVSSQRLSFLGGVDPKTGEVVDPSHELCGEKLTGRVLVLPGGRGSTVGSYVLMEMADR
GTAPAGIVVREAEPILVVGCVLGDIPLFHRPERDLVEELSTGDVVKLLPGGKVEV

Sequences:

>Translated_135_residues
MSVSPVRCEPVVDVEEPVEAEVLVSSQRLSFLGGVDPKTGEVVDPSHELCGEKLTGRVLVLPGGRGSTVGSYVLMEMADR
GTAPAGIVVREAEPILVVGCVLGDIPLFHRPERDLVEELSTGDVVKLLPGGKVEV
>Mature_134_residues
SVSPVRCEPVVDVEEPVEAEVLVSSQRLSFLGGVDPKTGEVVDPSHELCGEKLTGRVLVLPGGRGSTVGSYVLMEMADRG
TAPAGIVVREAEPILVVGCVLGDIPLFHRPERDLVEELSTGDVVKLLPGGKVEV

Specific function: Unknown

COG id: COG1786

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0107 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1486_METKA (Q8TVA6)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_614769.1
- ProteinModelPortal:   Q8TVA6
- SMR:   Q8TVA6
- GeneID:   1478081
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK1486
- NMPDR:   fig|190192.1.peg.1482
- HOGENOM:   HBG646578
- OMA:   PHGKGST
- BioCyc:   MKAN190192:MK1486-MONOMER
- GO:   GO:0016310
- HAMAP:   MF_00078
- InterPro:   IPR015928
- InterPro:   IPR002840
- InterPro:   IPR008279
- InterPro:   IPR012016
- InterPro:   IPR020794
- Gene3D:   G3DSA:3.50.30.10
- PIRSF:   PIRSF004966

Pfam domain/function: PF01989 DUF126; SSF52016 Aconitase/3IPM_dehydase_swvl

EC number: NA

Molecular weight: Translated: 14227; Mature: 14095

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSPVRCEPVVDVEEPVEAEVLVSSQRLSFLGGVDPKTGEVVDPSHELCGEKLTGRVLV
CCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCCEECCHHHHCCCCCCCEEEE
LPGGRGSTVGSYVLMEMADRGTAPAGIVVREAEPILVVGCVLGDIPLFHRPERDLVEELS
EECCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHCC
TGDVVKLLPGGKVEV
CCCEEEECCCCEECC
>Mature Secondary Structure 
SVSPVRCEPVVDVEEPVEAEVLVSSQRLSFLGGVDPKTGEVVDPSHELCGEKLTGRVLV
CCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCCEECCHHHHCCCCCCCEEEE
LPGGRGSTVGSYVLMEMADRGTAPAGIVVREAEPILVVGCVLGDIPLFHRPERDLVEELS
EECCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHCC
TGDVVKLLPGGKVEV
CCCEEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014