Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is MrtA

Identifier: 20094923

GI number: 20094923

Start: 1507201

End: 1507398

Strand: Reverse

Name: MrtA

Synonym: MK1487

Alternate gene names: NA

Gene position: 1507398-1507201 (Counterclockwise)

Preceding gene: 20094929

Following gene: 20094922

Centisome position: 88.93

GC content: 58.08

Gene sequence:

>198_bases
ATGGTCGAACGTAGCAAGGAGGAAGCGCTGTTTATTAAGGCACTTAAGGAGAAGTTCGAGGAGGATCCGGAGGAGAAGCA
CACGAAGTTCTACGTCTACGGTGGGTACCGCCAGTCACCGAGGAAGGAGTTCGCAAAGGGCGCGTTGCGAGAGTTCGAGC
CCGCGGGCGAGCGAGACCTCATCGTGCCCGCGGAGTAA

Upstream 100 bases:

>100_bases
CGAACCGGCGCCCGCCGCTTCCTCGCATTTTCAACTTAAACTTTAGCATGCCTACTAATTCCGGTGATCGTAATAGATAG
TACGATCAGGGGTGGTGTGA

Downstream 100 bases:

>100_bases
GCGGAGGAAGAGGCGGCGTCACCGTCGCTGGTTAGAGCTGAACGTAGAGTACTACGATATCTCGGGGTGCAGCTGACGCC
CCGATCGTTTTTTCGATGGT

Product: methyl coenzyme M reductase, alpha subunit, fragment

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MVERSKEEALFIKALKEKFEEDPEEKHTKFYVYGGYRQSPRKEFAKGALREFEPAGERDLIVPAE

Sequences:

>Translated_65_residues
MVERSKEEALFIKALKEKFEEDPEEKHTKFYVYGGYRQSPRKEFAKGALREFEPAGERDLIVPAE
>Mature_65_residues
MVERSKEEALFIKALKEKFEEDPEEKHTKFYVYGGYRQSPRKEFAKGALREFEPAGERDLIVPAE

Specific function: Unknown

COG id: COG4058

COG function: function code H; Methyl coenzyme M reductase, alpha subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7650; Mature: 7650

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVERSKEEALFIKALKEKFEEDPEEKHTKFYVYGGYRQSPRKEFAKGALREFEPAGERDL
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCE
IVPAE
EECCC
>Mature Secondary Structure
MVERSKEEALFIKALKEKFEEDPEEKHTKFYVYGGYRQSPRKEFAKGALREFEPAGERDL
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCE
IVPAE
EECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA