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The map label for this gene is MtrF

Identifier: 20094921

GI number: 20094921

Start: 1506320

End: 1506547

Strand: Reverse

Name: MtrF

Synonym: MK1485

Alternate gene names: 20094921

Gene position: 1506547-1506320 (Counterclockwise)

Preceding gene: 20094922

Following gene: 20094920

Centisome position: 88.88

GC content: 63.16

Gene sequence:

>228_bases
TTGGCGGAGGAAGGGTCCGAGCTGAAGGAGGTCATCATCGGCGCCCCGGCCATGGCGGACACGGACCGAGCCGACACCTA
CGTGAACGACGTACGGGACTCCAGCCAGTTCTTCGGCCGTGACGCCAGGCTGTACTTCGGTCTGAACGTGAACAGGTTCG
CGGGACTGGCCTGCGGTATGGTCTTCGCCGGCGTGTTGTTGGTGCCGTTGCTGCTTCTCGCGTTCTAA

Upstream 100 bases:

>100_bases
TCATCCCGTTCGGCCGGACCCACTTCCTCATCGCCCCGGGTCGGACGAGGTCGCAACGTTGAAAAGGTGCCGGTGTCAGT
GGGTCCGAGGGTGAGCGACG

Downstream 100 bases:

>100_bases
ATCCCTTTTTTACGGGTGTGGACAGTTGGGACTCCGGATAGGTTGGGGGATAACGGGAGCCGCGCACCTCCTGGTGGAGA
CGTTCAAGATCATGAAAGAA

Product: N5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit F

Products: NA

Alternate protein names: N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit F

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MAEEGSELKEVIIGAPAMADTDRADTYVNDVRDSSQFFGRDARLYFGLNVNRFAGLACGMVFAGVLLVPLLLLAF

Sequences:

>Translated_75_residues
MAEEGSELKEVIIGAPAMADTDRADTYVNDVRDSSQFFGRDARLYFGLNVNRFAGLACGMVFAGVLLVPLLLLAF
>Mature_74_residues
AEEGSELKEVIIGAPAMADTDRADTYVNDVRDSSQFFGRDARLYFGLNVNRFAGLACGMVFAGVLLVPLLLLAF

Specific function: Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step

COG id: COG4218

COG function: function code H; Tetrahydromethanopterin S-methyltransferase, subunit F

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mtrF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MTRF_METKA (Q8TVA7)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_614768.1
- GeneID:   1478080
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK1485
- NMPDR:   fig|190192.1.peg.1481
- BioCyc:   MKAN190192:MK1485-MONOMER
- BRENDA:   2.1.1.86
- GO:   GO:0015948
- HAMAP:   MF_01099
- InterPro:   IPR011307
- InterPro:   IPR013347

Pfam domain/function: PF09472 MtrF

EC number: =2.1.1.86

Molecular weight: Translated: 8130; Mature: 7999

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb0d62a4)-;

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEEGSELKEVIIGAPAMADTDRADTYVNDVRDSSQFFGRDARLYFGLNVNRFAGLACGM
CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHH
VFAGVLLVPLLLLAF
HHHHHHHHHHHHHCH
>Mature Secondary Structure 
AEEGSELKEVIIGAPAMADTDRADTYVNDVRDSSQFFGRDARLYFGLNVNRFAGLACGM
CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHH
VFAGVLLVPLLLLAF
HHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11930014