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The map label for this gene is yjjW [C]

Identifier: 20094920

GI number: 20094920

Start: 1505554

End: 1506294

Strand: Reverse

Name: yjjW [C]

Synonym: MK1484

Alternate gene names: 20094920

Gene position: 1506294-1505554 (Counterclockwise)

Preceding gene: 20094921

Following gene: 20094919

Centisome position: 88.87

GC content: 61.13

Gene sequence:

>741_bases
TTGGGACTCCGGATAGGTTGGGGGATAACGGGAGCCGCGCACCTCCTGGTGGAGACGTTCAAGATCATGAAAGAAATCTC
CCGGGAGCACCGGATCAGTGCGTTCCTCTCGGAGGCGGGTGAGGAAGTCGTTCGGATGTTCGGGTTGTGGGACGACCTGC
GGGAGATCTGCCCGGGCGGCTTCTACCGCGAGGTGTTCACGCAGTCAGAGGAGGGTGCCAGCTGCCCGATCATCGGTAGG
TTCGCGCTCGGAAAGTACGATCTACTGATAGTATCACCGGCTACCGCCAACACGGTGGCCAAGATCGCACACGGTATCGC
GGACACCCTGGTGACGAACGCTGTGGCGCAGGCTGGTAAAGGGGACGTCCCCGTCTGGGTGGTCCCGTGCGACTACGAGG
AGGGGAAGATCCGCACGATCACACCGTATATGGTGCTCAGGGAGCGATGCGAGGGATGCGGAATCTGCGTGGACGCGTGT
CCGAGGAGCGCCATCGACATGGTGGACGGTAAAGCGTTCATCCGGCTGCTGCGGTGTGTGGGGTGTGGGAAGTGTGCCGA
GGCTTGTCCTGAGGATGCCATTCACGGAGGTCTAGAGTACGAGATGAGGGTGAGATCCGTCGACGCGGAAAACGTGAGGA
AACTGGAGCGGATCGAAGGTATCGAGGTCTTACGACACCCCGAGGAGATCCCGGAGCGACTCGGGGAACTCGCGGGTGAG
GGTACTACTCCTGACAGGTAG

Upstream 100 bases:

>100_bases
AGGTTCGCGGGACTGGCCTGCGGTATGGTCTTCGCCGGCGTGTTGTTGGTGCCGTTGCTGCTTCTCGCGTTCTAAATCCC
TTTTTTACGGGTGTGGACAG

Downstream 100 bases:

>100_bases
GCTGGCCGCCGATGACGTCAGGAAGGCGGCGGAGGATTTCGAGTGGGCCGAGGTCAAGGTACTGCCCATCGACGTGGCCG
CGCTGATGACCACGCGCTTC

Product: flavoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MGLRIGWGITGAAHLLVETFKIMKEISREHRISAFLSEAGEEVVRMFGLWDDLREICPGGFYREVFTQSEEGASCPIIGR
FALGKYDLLIVSPATANTVAKIAHGIADTLVTNAVAQAGKGDVPVWVVPCDYEEGKIRTITPYMVLRERCEGCGICVDAC
PRSAIDMVDGKAFIRLLRCVGCGKCAEACPEDAIHGGLEYEMRVRSVDAENVRKLERIEGIEVLRHPEEIPERLGELAGE
GTTPDR

Sequences:

>Translated_246_residues
MGLRIGWGITGAAHLLVETFKIMKEISREHRISAFLSEAGEEVVRMFGLWDDLREICPGGFYREVFTQSEEGASCPIIGR
FALGKYDLLIVSPATANTVAKIAHGIADTLVTNAVAQAGKGDVPVWVVPCDYEEGKIRTITPYMVLRERCEGCGICVDAC
PRSAIDMVDGKAFIRLLRCVGCGKCAEACPEDAIHGGLEYEMRVRSVDAENVRKLERIEGIEVLRHPEEIPERLGELAGE
GTTPDR
>Mature_245_residues
GLRIGWGITGAAHLLVETFKIMKEISREHRISAFLSEAGEEVVRMFGLWDDLREICPGGFYREVFTQSEEGASCPIIGRF
ALGKYDLLIVSPATANTVAKIAHGIADTLVTNAVAQAGKGDVPVWVVPCDYEEGKIRTITPYMVLRERCEGCGICVDACP
RSAIDMVDGKAFIRLLRCVGCGKCAEACPEDAIHGGLEYEMRVRSVDAENVRKLERIEGIEVLRHPEEIPERLGELAGEG
TTPDR

Specific function: Unknown

COG id: COG1036

COG function: function code C; Archaeal flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014073
- InterPro:   IPR003382 [H]

Pfam domain/function: PF00037 Fer4; PF02441 Flavoprotein [H]

EC number: NA

Molecular weight: Translated: 26980; Mature: 26849

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLRIGWGITGAAHLLVETFKIMKEISREHRISAFLSEAGEEVVRMFGLWDDLREICPGG
CCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
FYREVFTQSEEGASCPIIGRFALGKYDLLIVSPATANTVAKIAHGIADTLVTNAVAQAGK
HHHHHHCCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
GDVPVWVVPCDYEEGKIRTITPYMVLRERCEGCGICVDACPRSAIDMVDGKAFIRLLRCV
CCCCEEEEECCCCCCCEEEECHHHHHHHHHCCCCEEHHHCCCHHHHHHCHHHHHHHHHHH
GCGKCAEACPEDAIHGGLEYEMRVRSVDAENVRKLERIEGIEVLRHPEEIPERLGELAGE
CCCHHHHHCCHHHHCCCCCEEHHEECCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCC
GTTPDR
CCCCCC
>Mature Secondary Structure 
GLRIGWGITGAAHLLVETFKIMKEISREHRISAFLSEAGEEVVRMFGLWDDLREICPGG
CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
FYREVFTQSEEGASCPIIGRFALGKYDLLIVSPATANTVAKIAHGIADTLVTNAVAQAGK
HHHHHHCCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
GDVPVWVVPCDYEEGKIRTITPYMVLRERCEGCGICVDACPRSAIDMVDGKAFIRLLRCV
CCCCEEEEECCCCCCCEEEECHHHHHHHHHCCCCEEHHHCCCHHHHHHCHHHHHHHHHHH
GCGKCAEACPEDAIHGGLEYEMRVRSVDAENVRKLERIEGIEVLRHPEEIPERLGELAGE
CCCHHHHHCCHHHHCCCCCEEHHEECCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCC
GTTPDR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]